94 Commits

Author SHA1 Message Date
GotthardG
c0951292d0 Refactor spreadsheet handling to track corrections and defaults
Improved the backend's value cleaning to differentiate between corrections and defaults, logging metadata for clearer traceability. Updated frontend to display corrected/defaulted fields with visual cues and tooltips for better user feedback. Enhanced data models and response structures to support this richer metadata.
2025-01-14 21:46:11 +01:00
GotthardG
f6c19cc4da Refactor spreadsheet processing to improve validation logic
Enhanced value cleaning and validation for spreadsheet data with dynamic handling of columns and corrections. Improved feedback for users with detailed error messages and visual indicators for corrected or defaulted values. Simplified backend and frontend logic for better maintainability and usability.
2025-01-13 21:55:15 +01:00
GotthardG
19ef20e6b0 Fix type and handle missing dewar_id in sample router.
Updated puck_id type from str to int for better type consistency. Added a fallback value of -1 for pucks with missing dewar_id to prevent potential errors when querying pucks.
2025-01-10 13:39:10 +01:00
GotthardG
fa99e3fa63 Refactor response construction in sample endpoint.
Replaced direct return of `last_event` with an explicit construction of `SampleEventResponse`. This ensures clarity and better adherence to the response schema.
2025-01-10 12:02:49 +01:00
GotthardG
f233058070 Add image upload endpoint and fix puck location handling
Introduced `/samples/{sample_id}/upload-images` API for uploading images tied to samples, validating file types, and saving them in structured directories. Fixed `puck_location_in_dewar` type handling in puck routes. Updated project version in `pyproject.toml`.
2025-01-10 11:31:51 +01:00
GotthardG
d6910411f1 Add default values to optional fields in SampleUpdate 2025-01-10 10:44:03 +01:00
GotthardG
1e766fa620 Add default values to optional fields in SampleUpdate 2025-01-10 10:00:14 +01:00
GotthardG
0f6759e417 Add default values to optional fields in SampleUpdate 2025-01-09 22:51:26 +01:00
GotthardG
ac38bc3bb6 Refactor puck handling for responses
Revised and optimized the `get_pucks_with_tell_position` endpoint to streamline logic and enhance clarity.
2025-01-09 20:36:03 +01:00
GotthardG
c45a46b07b Add example scripts and enhance puck event queries
Introduced a new Jupyter Notebook with API usage examples for managing pucks and samples. Refactored puck retrieval logic to include the latest event type and `tell_position`, improving data accuracy. Updated backend version to 0.1.0a16 accordingly.
2025-01-09 16:56:38 +01:00
GotthardG
9bfcc30981 Refactor dewar and sample handling; improve grid data binding
Updated Dewar and Sample schemas, added nested relationships, and adjusted API responses for better data handling. Simplified puck normalization, enhanced data grid logic in the frontend, and implemented a PUT endpoint for updating samples. Incremented backend version to 0.1.0a15 and added new HTTP request example.
2025-01-09 13:01:52 +01:00
GotthardG
a9cb7a41b0 Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-09 09:44:59 +01:00
GotthardG
0fdd5e54b7 Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-08 17:01:42 +01:00
GotthardG
fb5e930096 Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-08 16:59:46 +01:00
GotthardG
6c91bc78da Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-08 15:18:08 +01:00
GotthardG
4f73f41717 Refactor and extend puck handling with tell_position updates
Refactored puck updating logic to use Pydantic models for validation and normalization. Added a new endpoint to retrieve all pucks with a tell_position and their associated samples. Updated project version to 0.1.0a11 in pyproject.toml.
2025-01-08 14:11:34 +01:00
GotthardG
6d67d02259 Expand sample data handling and grid display.
Integrated additional sample parameters into backend and frontend for enhanced data collection. Updated pyproject version to reflect these changes. This improves user interface flexibility and enriches displayed sample metadata.
2025-01-08 09:52:15 +01:00
GotthardG
9b4f8599f3 Add support for data collection parameters across layers
Introduced serialization for `data_collection_parameters` in backend models and processing. Added logic to parse and attach data collection parameters in the frontend. This ensures consistent handling and storage of these parameters throughout the application.
2025-01-08 09:19:23 +01:00
GotthardG
35369fd13c Add column type mapping and enhance validation
Introduced a backend mapping for column expected types, improving validation and error handling. Updated UI to highlight default and corrected values, with additional detailed validation for data collection parameters.
2025-01-07 16:07:13 +01:00
GotthardG
92306fcfa6 Add column type mapping and enhance validation
Introduced a backend mapping for column expected types, improving validation and error handling. Updated UI to highlight default and corrected values, with additional detailed validation for data collection parameters.
2025-01-07 15:45:08 +01:00
GotthardG
54975b5919 Add spreadsheet enhancements and default handling
Implemented a toggleable spreadsheet UI component for sample data, added fields such as priority and comments, and improved backend validation. Default values for "directory" are now assigned when missing, with feedback highlighted in green on the front end.
2025-01-06 14:40:02 +01:00
GotthardG
27d2717a05 Refactor slot UI and backend refill logic.
Updated slot styling for improved user feedback and responsiveness. Simplified LN2 representation with a new level bar and adjusted refill logic to a 48-hour interval. Removed unused functions for cleaner backend code.
2024-12-20 13:20:45 +01:00
GotthardG
da5dbb9e31 Refactor puck handling and update tell position setting
Simplify and standardize puck name normalization and validation. Refactor `set_tell_positions` to handle batch operations, improve error handling, and provide detailed responses for each puck. Removed unnecessary `with-tell-position` endpoint for better clarity and maintainability.
2024-12-19 15:16:21 +01:00
GotthardG
14eaca81c6 Update tell position logic and add new endpoint
Refactored tell position logic to use `segment` and `puck_in_segment` fields, replacing the previous single `tell_position` field. Introduced a new `/set-tell-positions` endpoint for setting tell positions based on these changes and removed the deprecated endpoint handling the old logic. Enhanced validation and streamlined handling of related logistics and puck events.
2024-12-19 13:21:37 +01:00
GotthardG
ef981d1e45 Refactor OpenAPI fetcher for improved clarity and robustness
Reorganized and enhanced the OpenAPI fetch logic for better maintainability and error handling. Key updates include improved environment variable validation, more detailed error messages, streamlined configuration loading, and additional safety checks for file paths and directories. Added proper logging and ensured the process flow is easy to trace.
2024-12-18 14:22:37 +01:00
GotthardG
9b6ad107bb Refactor OpenAPI fetcher for improved clarity and robustness
Reorganized and enhanced the OpenAPI fetch logic for better maintainability and error handling. Key updates include improved environment variable validation, more detailed error messages, streamlined configuration loading, and additional safety checks for file paths and directories. Added proper logging and ensured the process flow is easy to trace.
2024-12-17 16:25:53 +01:00
GotthardG
dbf7864e7e Refactor OpenAPI fetcher for improved clarity and robustness
Reorganized and enhanced the OpenAPI fetch logic for better maintainability and error handling. Key updates include improved environment variable validation, more detailed error messages, streamlined configuration loading, and additional safety checks for file paths and directories. Added proper logging and ensured the process flow is easy to trace.
2024-12-17 16:16:54 +01:00
GotthardG
19c5d7f880 Refactor environment-specific configurations and data loading.
Refactored database and server configuration to handle environments (dev, test, prod) explicitly, including tailored database setup and SSL management. Separated slot and sample data loading for better control during initialization. Improved environment variable usage and error handling for production certificates.
2024-12-17 13:11:26 +01:00
GotthardG
0178de96fd fixing bugs with ci pipeline 2024-12-16 22:50:04 +01:00
GotthardG
a0be71bdfe Fix formatting with black 2024-12-16 10:41:56 +01:00
GotthardG
24afe9fa9e tentative to add ci pipeline 2024-12-13 15:37:48 +01:00
GotthardG
530c9efae0 retrieve pucks that are in the tell dewar 2024-12-12 15:10:14 +01:00
GotthardG
6c88ff9651 fixed bug with uk zip code and add retrieved timestamp for dewars at the beamline 2024-12-12 11:59:42 +01:00
GotthardG
fd17c0e672 refined output of retrieving pucks and dewars at beamlines 2024-12-12 11:31:27 +01:00
GotthardG
156533f372 get puck events 2024-12-11 17:01:52 +01:00
GotthardG
5d7dcebe2e get puck events 2024-12-11 16:59:22 +01:00
GotthardG
c3e476002a get puck events 2024-12-11 16:54:16 +01:00
GotthardG
3b79951a43 get puck events 2024-12-11 16:50:59 +01:00
GotthardG
f83dc1ea58 get puck events 2024-12-11 16:44:38 +01:00
GotthardG
e44212e642 get puck events 2024-12-11 16:35:01 +01:00
GotthardG
ed84060563 get puck events 2024-12-11 16:24:22 +01:00
GotthardG
9cd0d81dac get puck events 2024-12-11 15:39:16 +01:00
GotthardG
328a95d76e fixed bug with generate qrcode 2024-12-11 14:28:31 +01:00
GotthardG
958c9167fc added puck events 2024-12-11 13:57:23 +01:00
GotthardG
66a0ce3281 fixed bug with unique id creation during spreadsheet upload 2024-12-11 12:32:33 +01:00
GotthardG
9160339961 fixed bug with logistics 2024-12-11 10:10:43 +01:00
GotthardG
250e090133 fixed bug with spreadsheet import 2024-12-10 16:36:36 +01:00
GotthardG
29a9d16bc3 various bugs fixing 2024-12-06 14:53:27 +01:00
GotthardG
996fc66d76 switched to mariaDB 2024-12-05 21:49:00 +01:00
GotthardG
7b00db3c0d added sample tracker on the frontend 2024-12-04 14:45:47 +01:00