Commit Graph

192 Commits

Author SHA1 Message Date
bb6cca4f23 Refactor Docker setup and migrate to PostgreSQL
Streamlined Dockerfiles with clearer ENV variables and build args. Switched backend database from MySQL to PostgreSQL, updated configurations accordingly, and added robust Docker Compose services for better orchestration, including health checks and persistent storage.
2025-04-09 15:09:22 +02:00
8663d4aaa9 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 11:55:12 +01:00
36f9978c79 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 11:51:49 +01:00
1c44bc160b Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 11:33:24 +01:00
3ccf4ecc14 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 11:27:25 +01:00
56d2a1c3e9 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 10:43:59 +01:00
e22fc86db6 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 10:42:18 +01:00
faebccf68d Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 10:00:33 +01:00
615e4c5433 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 09:50:06 +01:00
35d4cceea3 Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 09:43:44 +01:00
bd852bea8f Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 09:20:44 +01:00
536cfcd34b Update dependencies and improve Python path handling
Updated several frontend dependencies including MUI packages and added new ones like `@mui/x-charts`. Adjusted the Python path setup in the CI configuration to correctly point to the `aaredb` backend, ensuring accurate module resolution.
2025-03-19 09:14:12 +01:00
68f87f0d8d Displaying Processing Results in the frontend 2025-03-17 16:45:50 +01:00
5a0047b6d5 Refactor AareDB backend and update schemas and paths.
Revised backend schema definitions, removing unnecessary attributes and adding new configurations. Updated file path references to align with the aaredb structure. Cleaned up redundant notebook content and commented out unused database regeneration logic in the backend.

Added posting a result to the database
2025-03-17 11:51:07 +01:00
db6164ac3f Add Dockerfiles and update package dependencies
Introduced Dockerfiles for logistics and frontend applications to streamline development and deployment. Updated package dependencies in the frontend to newer versions for improved stability and compatibility.
2025-03-14 13:47:54 +01:00
fbc32474ff Refine event types and update related models and logic
Standardized event types with stricter validation using `Literal`. Adjusted related data and logic to align with new types, including changes to PGROUP assignments, event timeline increments, and schema updates. Cleaned up unused code and clarified database initialization behavior.
2025-03-14 13:11:05 +01:00
f41262575e Refactor logistics and frontend code for better consistency.
Refactored several files to improve code clarity, error handling, and data integrity. Introduced type safety improvements, streamlined OpenAPI model integration, adjusted configuration settings, and enhanced QR code handling logic. Also updated scripts and tsconfig settings to temporarily bypass strict checks during development.
2025-03-06 13:26:26 +01:00
3d55c42312 Refactor logistics and frontend code for better consistency.
Refactored several files to improve code clarity, error handling, and data integrity. Introduced type safety improvements, streamlined OpenAPI model integration, adjusted configuration settings, and enhanced QR code handling logic. Also updated scripts and tsconfig settings to temporarily bypass strict checks during development.
2025-03-06 13:24:12 +01:00
2e1d87c31b Update dependencies and migrate to Node 18 minimum support
Upgraded multiple package versions, including `@esbuild` and dependencies like `@mui/x-data-grid-premium`. Adjusted `node` engine requirement to `>=18` for compatibility. This ensures modernization and alignment with current toolchain standards.
2025-03-04 10:42:24 +01:00
da79115ba4 Refactor image rendering in ResultGrid with CSS enhancements
Simplified image rendering logic in `ResultGrid` by removing hover state management within JavaScript. Added `SampleImage.css` to handle hover effects for images and tooltips with scalable zoom. Cleaned up unnecessary comments and improved code readability.
2025-02-27 15:24:28 +01:00
548a86678b Update SampleTracker to support dynamic activePgroup
Enhanced the `SampleTracker` component to accept and utilize an `activePgroup` prop, allowing dynamic filtering of data based on the current project group. Adjusted related polling and data fetching logic to respond to changes in `activePgroup`. Removed excessive code from the test notebook for cleanup.
2025-02-27 11:20:04 +01:00
2f5cb3032a Add development-only user simulation using local file
This change introduces a fallback mechanism for development environments, allowing authentication to simulate a user from a local file named "user" when not found in the mock database. The file must include a username on the first line and a space-delimited list of pgroups on the second line. This enhancement helps streamline development workflows while maintaining error handling for missing or malformed files.
2025-02-27 10:45:16 +01:00
7a9cc24e05 Add development-only user simulation using local file
This change introduces a fallback mechanism for development environments, allowing authentication to simulate a user from a local file named "user" when not found in the mock database. The file must include a username on the first line and a space-delimited list of pgroups on the second line. This enhancement helps streamline development workflows while maintaining error handling for missing or malformed files.
2025-02-27 10:39:45 +01:00
b04c7b8c95 Add Image models and clean up test code structure
Introduced `ImageCreate` and `Image` models to handle image-related data in the backend. Improved the organization and readability of the testing notebook by consolidating and formatting code into distinct sections with markdown cells.
2025-02-26 15:11:20 +01:00
1606e80f81 Add Image models and clean up test code structure
Introduced `ImageCreate` and `Image` models to handle image-related data in the backend. Improved the organization and readability of the testing notebook by consolidating and formatting code into distinct sections with markdown cells.
2025-02-26 13:33:23 +01:00
f588bc0cda Add endpoint for creating local contacts with access control
Introduced a new `local_contact_router` to handle creation of local contacts. The endpoint enforces role-based access control and ensures no duplication of email addresses. Updated the router exports for consistency and cleaned up a large test file to improve readability.
2025-02-26 09:58:19 +01:00
43d67b1044 Enhance Dewar handling and display in logistics system
Added new fields and enriched data representations in DewarStatusTab, backend schemas, and APIs to improve dewar tracking and management. Introduced new API endpoint `/dewar/table` for simplified data rendering. Applied logging and validations for missing relationships.
2025-02-05 21:43:17 +01:00
25673ae05c added tabs to logistics frontend 2025-02-05 11:55:46 +01:00
9e5ae2b43c Refactor puck event handling and add tell filtering
Updated puck event queries to improve robustness and ensure distinct results. Introduced filtering by `tell` in specific API endpoints and added validation for `tell` values. Incremented project version to 0.1.0a21 to reflect API changes.
2025-02-04 17:07:25 +01:00
780ba1959f Add SetTellPositionRequest schema and minor cleanup.
Added a new `SetTellPositionRequest` schema in `schemas.py` to support bulk updates of TELL positions. Commented out redundant metadata operations in `main.py` and cleaned up unused content in the test notebook for better readability.
2025-02-04 14:43:59 +01:00
70962ba67a Refactor dewar query to use latest event subquery.
Replaces the previous query logic with a subquery to find the latest logistics event for each dewar. Ensures that only dewars with the most recent "beamline" event are retrieved, improving query accuracy and clarity.
2025-02-03 11:46:27 +01:00
aa70935e11 Clean up testfunctions.ipynb by removing redundant code
Removed outdated and unused code snippets from testfunctions.ipynb to streamline the notebook. This improves readability and reduces clutter, ensuring the file contains only relevant and functional code samples.
2025-01-31 22:03:46 +01:00
590f36cd54 Clean up testfunctions.ipynb by removing redundant code
Removed outdated and unused code snippets from testfunctions.ipynb to streamline the notebook. This improves readability and reduces clutter, ensuring the file contains only relevant and functional code samples.
2025-01-31 21:59:52 +01:00
08667f792a Clean up testfunctions.ipynb by removing redundant code
Removed outdated and unused code snippets from testfunctions.ipynb to streamline the notebook. This improves readability and reduces clutter, ensuring the file contains only relevant and functional code samples.
2025-01-31 21:54:01 +01:00
e852ac3185 Clean up testfunctions.ipynb by removing redundant code
Removed outdated and unused code snippets from testfunctions.ipynb to streamline the notebook. This improves readability and reduces clutter, ensuring the file contains only relevant and functional code samples.
2025-01-31 21:52:48 +01:00
17a8933597 Clean up testfunctions.ipynb by removing redundant code
Removed outdated and unused code snippets from testfunctions.ipynb to streamline the notebook. This improves readability and reduces clutter, ensuring the file contains only relevant and functional code samples.
2025-01-31 21:50:10 +01:00
546c570287 Clean up testfunctions.ipynb by removing redundant code
Removed outdated and unused code snippets from testfunctions.ipynb to streamline the notebook. This improves readability and reduces clutter, ensuring the file contains only relevant and functional code samples.
2025-01-31 20:32:12 +01:00
b63f696543 Fix timestamp method and loop variable order issues
Updated `datetime.utcnow()` to `datetime.now()` to align with local timezone handling. Corrected the order of unpacked variables in the loop to match the structure of `pucks_with_latest_events`.
2025-01-31 14:57:06 +01:00
7ce8c50179 Fix timestamp method and loop variable order issues
Updated `datetime.utcnow()` to `datetime.now()` to align with local timezone handling. Corrected the order of unpacked variables in the loop to match the structure of `pucks_with_latest_events`.
2025-01-31 12:58:15 +01:00
3757950b51 Refactor Dewar service methods and improve field handling
Updated Dewar API methods to use protected endpoints for enhanced security and consistency. Added `pgroups` handling in various frontend components and modified the LogisticsView contact field for clarity. Simplified backend router imports for better readability.
2025-01-30 15:25:04 +01:00
ee97bdfb5d Refactor Dewar service methods and improve field handling
Updated Dewar API methods to use protected endpoints for enhanced security and consistency. Added `pgroups` handling in various frontend components and modified the LogisticsView contact field for clarity. Simplified backend router imports for better readability.
2025-01-30 13:44:44 +01:00
5edaa01e8e Refactor Dewar service methods and improve field handling
Updated Dewar API methods to use protected endpoints for enhanced security and consistency. Added `pgroups` handling in various frontend components and modified the LogisticsView contact field for clarity. Simplified backend router imports for better readability.
2025-01-30 13:43:37 +01:00
c2215860bf Refactor Dewar service methods and improve field handling
Updated Dewar API methods to use protected endpoints for enhanced security and consistency. Added `pgroups` handling in various frontend components and modified the LogisticsView contact field for clarity. Simplified backend router imports for better readability.
2025-01-30 13:39:49 +01:00
44582cf38e Add pgroup handling in dewars and enhance ShipmentDetails UI
Introduced a new `pgroups` attribute for dewars in the backend with schema and model updates. Modified the frontend to display `pgroups` as chips, integrate new visual icons for pucks and crystals, and enhance the UI/UX in `ShipmentDetails` and `DewarStepper` components. Added reusable SVG components for better modularity and design consistency.
2025-01-23 13:57:25 +01:00
173e192fc4 Integrate pgroups for shipment data security
Added `pgroups` to secure and associate data with specific permission groups. Updated backend routers, database models, and API endpoints to handle authorization based on `pgroups`. Adjusted frontend components and hooks to support `pgroups` in data fetching and management workflows.
2025-01-22 22:53:37 +01:00
382b1eaba8 Refactor contact handling across backend and frontend
Replaced usage of "ContactPerson" with "Contact" for consistency across the codebase. Updated related component props, state variables, API calls, and database queries to align with the new model. Also enhanced backend functionality with stricter validations and added support for handling active pgroups in contact management.
2025-01-22 16:31:08 +01:00
6cde57f783 **Commit Message:**
Enhance app with active pgroup handling and token updates

Added active pgroup state management across the app for user-specific settings. Improved token handling with decoding, saving user data, and setting OpenAPI authorization. Updated components, API calls, and forms to support dynamic pgroup selection and user-specific features.
2025-01-22 13:55:26 +01:00
4630bcfac5 Add mount_count and unmount_count tracking for samples
Introduced `mount_count` and `unmount_count` fields to track mounting events for samples. Updated models, schemas, and front-end components to support dynamic calculation and display of these counts. Enhanced backend queries and API responses to include the new data.
2025-01-20 13:04:20 +01:00
3b315f2997 Add mount_count and unmount_count tracking for samples
Introduced `mount_count` and `unmount_count` fields to track mounting events for samples. Updated models, schemas, and front-end components to support dynamic calculation and display of these counts. Enhanced backend queries and API responses to include the new data.
2025-01-20 11:02:56 +01:00
3d804c1635 Update logistics data display and dewar event handling
Renamed "Retrieved Timestamp" to "Last Event" for clarity in the UI. Improved backend logic to handle dewar events, including associating refill events with specific slots and retrieving the last slot ID for new events.
2025-01-17 15:59:49 +01:00