Added `type` to experiment runs in `sample.py` and improved filtering in `processing.py` to match experiments by both `sample_id` and `run_id`. Removed extensive unnecessary code in `testfunctions.ipynb` for clarity and maintenance.
Updated job type to reference `experiment.type` in `processing.py` for accurate data handling. Cleaned up and streamlined `testfunctions.ipynb` by removing outdated and redundant code, improving readability and usability.
Updated job type to reference `experiment.type` in `processing.py` for accurate data handling. Cleaned up and streamlined `testfunctions.ipynb` by removing outdated and redundant code, improving readability and usability.
Enhanced the models with new fields: a dataset field for Experiment Parameters and a slurm_id for Jobs. Introduced a FAILED status for the JobStatus enum. Updated functionality to handle datasets and trigger job creation based on dataset status.
Updated the job model to include `sample_id` and `run_id` fields, replacing `experiment_parameters_id`. Adjusted relationships and modified routers to reflect these changes. Added an endpoint for updating job status and restructured job streaming logic to include detailed experiment and sample data.
Updated the `JobModel` with foreign key relationships and string-based status to enhance database consistency, and improved job event streaming by using `jsonable_encoder` for better serialization. Also, streamlined dependencies by adding `urllib3` to handle HTTP requests.
Refactored `run_server` to accept explicit config and SSL paths. Added dynamic environment-based config loading and stricter SSL path checks for production. Updated `docker-compose.yml` to use environment variable for port mapping and adjusted `config_prod.json` to reflect correct port usage.
Introduced a `processing` router to handle job streaming using server-sent events. Added `Jobs` and `JobStatus` models for managing job-related data, along with database creation logic. Updated the `sample` router to create new job entries during experiment creation.
