Add beamtime relationships and enhance sample handling

This commit adds relationships to link Pucks and Samples to Beamtime in the models, enabling better data association. Includes changes to assign beamtime IDs during data generation and updates in API response models for improved data loading. Removed redundant code in testfunctions.ipynb to clean up the notebook.
This commit is contained in:
GotthardG
2025-05-06 11:28:36 +02:00
parent 102a11eed7
commit 4328b84795
10 changed files with 222 additions and 28 deletions

View File

@ -12,6 +12,7 @@ import AddressManager from './pages/AddressManagerView';
import ContactsManager from './pages/ContactsManagerView';
import LoginView from './pages/LoginView';
import ProtectedRoute from './components/ProtectedRoute';
import BeamtimeOverview from './components/BeamtimeOverview';
const App: React.FC = () => {
const [openAddressManager, setOpenAddressManager] = useState(false);
@ -84,7 +85,12 @@ const App: React.FC = () => {
<Route path="/" element={<ProtectedRoute element={<HomePage />} />} />
<Route path="/shipments" element={<ProtectedRoute element={<ShipmentView pgroups={pgroups} activePgroup={activePgroup} />} />} />
<Route path="/planning" element={<ProtectedRoute element={<PlanningView />} />} />
<Route path="/results" element={<ProtectedRoute element={<ResultsView pgroups={pgroups} activePgroup={activePgroup} />} />} />
<Route path="/results/:beamtimeId" element={<ProtectedRoute element={<ResultsView pgroups={pgroups} activePgroup={activePgroup} />} />} />
<Route path="/beamtime-overview" element={<ProtectedRoute element={<BeamtimeOverview activePgroup={activePgroup} />} />} />
<Route path="/results" element={<ProtectedRoute element={<BeamtimeOverview activePgroup={activePgroup} />} />}/>
{/* Optionally, add a 404 fallback route */}
<Route path="*" element={<div>Page not found</div>} />
</Routes>
<Modal open={openAddressManager} onClose={handleCloseAddressManager} title="Address Management">
<AddressManager pgroups={pgroups} activePgroup={activePgroup} />

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@ -0,0 +1,138 @@
import React, { useEffect, useState } from 'react';
import { DataGridPremium, GridColDef } from '@mui/x-data-grid-premium';
import { useNavigate } from 'react-router-dom'; // For navigation
import { BeamtimesService } from '../../openapi';
import { Chip, Typography } from '@mui/material';
interface BeamtimeRecord {
id: number;
start_date: string;
end_date: string;
shift: string;
beamline: string;
local_contact: string;
pgroups: string;
}
interface BeamtimeOverviewProps {
activePgroup: string;
}
const BeamtimeOverview: React.FC<BeamtimeOverviewProps> = ({ activePgroup }) => {
const [rows, setRows] = useState<BeamtimeRecord[]>([]);
const [isLoading, setIsLoading] = useState(false);
// For navigation
const navigate = useNavigate();
const renderPgroupChips = (pgroups: string, activePgroup: string) => {
// Safely handle pgroups as an array
const pgroupsArray = pgroups.split(",").map((pgroup: string) => pgroup.trim());
if (!pgroupsArray.length) {
return <Typography variant="body2">No associated pgroups</Typography>;
}
return pgroupsArray.map((pgroup: string) => (
<Chip
key={pgroup}
label={pgroup}
color={pgroup === activePgroup ? "primary" : "default"} // Highlight active pgroups
sx={{
margin: 0.5,
backgroundColor: pgroup === activePgroup ? '#19d238' : '#b0b0b0',
color: pgroup === activePgroup ? 'white' : 'black',
fontWeight: 'bold',
borderRadius: '8px',
height: '20px',
fontSize: '12px',
boxShadow: '0px 1px 3px rgba(0, 0, 0, 0.2)',
mr: 1,
mb: 1,
}}
/>
));
};
// Fetch beamtime records from the backend
const fetchBeamtimeRecords = async () => {
try {
setIsLoading(true);
const records = await BeamtimesService.getMyBeamtimesProtectedBeamtimesMyBeamtimesGet(activePgroup);
const mappedRecords: BeamtimeRecord[] = records.map((record: any) => ({
id: record.id,
start_date: record.start_date || 'N/A',
end_date: record.end_date || 'N/A',
shift: record.shift || 'N/A',
beamline: record.beamline || 'N/A',
local_contact: `${record.local_contact.firstname || "N/A"} ${record.local_contact.lastname || "N/A"}`,
pgroups: record.pgroups || '',
}));
setRows(mappedRecords);
} catch (error) {
console.error('Failed to fetch beamtime records:', error);
} finally {
setIsLoading(false);
}
};
useEffect(() => {
fetchBeamtimeRecords();
}, [activePgroup]);
// Define table columns, including the "View Results" button
const columns: GridColDef<BeamtimeRecord>[] = [
{ field: 'start_date', headerName: 'Start Date', flex: 1 },
{ field: 'end_date', headerName: 'End Date', flex: 1 },
{ field: 'shift', headerName: "Shift", flex: 1 },
{ field: 'beamline', headerName: 'Beamline', flex: 1 },
{ field: 'local_contact', headerName: 'Local Contact', flex: 1 },
{
field: 'pgroups',
headerName: 'Pgroups',
flex: 2, // Slightly wider column for chips
renderCell: (params) => renderPgroupChips(params.row.pgroups, activePgroup),
},
{
field: 'viewResults',
headerName: 'Actions',
flex: 1,
renderCell: (params) => (
<button
onClick={() => handleViewResults(params.row.id)}
style={{
padding: '6px 12px',
backgroundColor: '#1976d2',
color: '#fff',
border: 'none',
borderRadius: '4px',
cursor: 'pointer',
}}
>
View Results
</button>
),
},
];
// Navigate to the ResultsView page for the selected beamtime
const handleViewResults = (beamtimeId: number) => {
navigate(`/results/${beamtimeId}`); // Pass the beamtimeId in the URL
};
return (
<div style={{ height: 400, width: '100%' }}>
<h2>Beamtime Overview</h2>
<DataGridPremium
rows={rows}
columns={columns}
loading={isLoading}
disableRowSelectionOnClick
/>
</div>
);
};
export default BeamtimeOverview;

View File

@ -1,24 +1,24 @@
// components/ResultView.tsx
import React from 'react';
import { useParams } from 'react-router-dom';
import SampleTracker from '../components/SampleTracker';
import ResultGrid from '../components/ResultGrid';
interface ResultsViewProps {
activePgroup: string;
}
interface ResultsViewProps {}
const ResultsView: React.FC<ResultsViewProps> = ({activePgroup
}) => {
const ResultsView: React.FC<ResultsViewProps> = () => {
// Get the selected beamtime ID from the URL
const { beamtimeId } = useParams();
return (
<div>
<h1>Results Page</h1>
<SampleTracker activePgroup={activePgroup}/>
<ResultGrid activePgroup={activePgroup} />
</div>
<h2>Results for Beamtime ID: {beamtimeId}</h2>
{/* Use the beamtimeId to filter or query specific results */}
<SampleTracker activePgroup={`beamtime_${beamtimeId}`} />
<ResultGrid activePgroup={`beamtime_${beamtimeId}`} />
</div>
);
};
export default ResultsView;
export default ResultsView;