From 573527393400fcb42fd8f98f8d4410c78c7953dd Mon Sep 17 00:00:00 2001
From: viar <viar@localhost.localdomain>
Date: Mon, 19 Sep 2022 11:26:58 +0200
Subject: [PATCH] Closing issue #36. Fixed bugs on Manual transformation
 coloring XYZwidget orange

---
 .../itkDTRrecon/itkImageProcessor.cpp         | 52 +++++++++----------
 1 file changed, 24 insertions(+), 28 deletions(-)

diff --git a/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp b/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp
index d4e67f5..a89f9da 100644
--- a/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp
+++ b/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp
@@ -1589,8 +1589,8 @@ void itkImageProcessor::loadRTPlanInfo(
     m_RTMetaInfo->SetIsocenterLPS(Point);
 
     Point[0] = dLAT;
-    Point[1] = dVRT;
-    Point[2] = dLNG;
+    Point[1] = dLNG;
+    Point[2] = dVRT;
 
     m_RTMetaInfo->SetIsocenterIECS(Point);
 
@@ -1647,21 +1647,17 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
                 m_DRTGeometryMetaInfo->GetProjectionCenter()
                 );
 
-//    std::cout<< "///////////////// PGEOM META BEG ///////////////" <<std::endl;
-
-    std::cout<<"NominalIsocenter IEC"<< m_DRTGeometryMetaInfo->GetProjectionCenter() <<std::endl;
-
-    std::cout<<"CALIBRATION NominalIsocenter_wZcorrectionLPS "<<NominalIsocenter_wZcorrectionLPS<<std::endl;
-    std::cout<<"CALIBRATION NominalIsocenterZero_wZcorrectionLPS  "<<NominalIsocenterZero_wZcorrectionLPS<<std::endl;
-
 
     ImageType3D::PointType IsocenterOffsetLPS;
 
     IsocenterOffsetLPS = m_CTMetaInfo->ConvertIECPointToLPSPoint(
                 m_DRTGeometryMetaInfo->GetProjectionCenterOffset1());
 
-
-    std::cout<<"CALIBRATION IsocenterOffsetLPS  "<<IsocenterOffsetLPS<<std::endl;
+//    std::cout<< "///////////////// PGEOM META BEG ///////////////" <<std::endl;
+//    std::cout<<"NominalIsocenter IEC"<< m_DRTGeometryMetaInfo->GetProjectionCenter() <<std::endl;
+//    std::cout<<"CALIBRATION NominalIsocenter_wZcorrectionLPS "<<NominalIsocenter_wZcorrectionLPS<<std::endl;
+//    std::cout<<"CALIBRATION NominalIsocenterZero_wZcorrectionLPS  "<<NominalIsocenterZero_wZcorrectionLPS<<std::endl;
+//    std::cout<<"CALIBRATION IsocenterOffsetLPS  "<<IsocenterOffsetLPS<<std::endl;
 
     ImageType3D::PointType CalibratedIsocenterLPS;
 
@@ -1697,13 +1693,13 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
 //                m_DRTImage1MetaInfo->GetProjectionOriginLPS()
                 );
 
-    std::cout<<"Bounds1: "
-            <<vBounds.data()[0]<<" "
-           <<vBounds.data()[1]<<" "
-          <<vBounds.data()[2]<<" "
-         <<vBounds.data()[3]<<" "
-        <<vBounds.data()[4]<<" "
-       <<vBounds.data()[5]<<std::endl;
+//    std::cout<<"Bounds1: "
+//            <<vBounds.data()[0]<<" "
+//           <<vBounds.data()[1]<<" "
+//          <<vBounds.data()[2]<<" "
+//         <<vBounds.data()[3]<<" "
+//        <<vBounds.data()[4]<<" "
+//       <<vBounds.data()[5]<<std::endl;
 
     m_DRTImage1MetaInfo->SetSizeWithBounds(
                 vBounds.data(),
@@ -1737,16 +1733,16 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
                     Std_DRT2LPS)
                 );
 
-    std::cout<<"IsocenterOffsetLPS"<< IsocenterOffsetLPS <<std::endl;
-    std::cout<<"CalibratedIsocenterLPS"<< CalibratedIsocenterLPS  <<std::endl;
-    std::cout<<"CalibratedIsocenterZeroLPS"<< CalibratedIsocenterZeroLPS  <<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetSize()"<< m_DRTImage1MetaInfo->GetSize()  <<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetSpacing()"<< m_DRTImage1MetaInfo->GetSpacing()  <<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetOrigin()"<< m_DRTImage1MetaInfo->GetOrigin()  <<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetCOV()"<< m_DRTImage1MetaInfo->GetCOV()  <<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetOriginLPS()"<< m_DRTImage1MetaInfo->GetOriginLPS()  <<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetProjectionAngleLPS()"<<m_DRTImage1MetaInfo->GetProjectionAngleLPS()<<std::endl;
-    std::cout<<"m_DRTImage1MetaInfo->GetImageDirectionsLPS()"<< m_DRTImage1MetaInfo->GetImageDirectionsLPS()  <<std::endl;
+//    std::cout<<"IsocenterOffsetLPS"<< IsocenterOffsetLPS <<std::endl;
+//    std::cout<<"CalibratedIsocenterLPS"<< CalibratedIsocenterLPS  <<std::endl;
+//    std::cout<<"CalibratedIsocenterZeroLPS"<< CalibratedIsocenterZeroLPS  <<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetSize()"<< m_DRTImage1MetaInfo->GetSize()  <<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetSpacing()"<< m_DRTImage1MetaInfo->GetSpacing()  <<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetOrigin()"<< m_DRTImage1MetaInfo->GetOrigin()  <<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetCOV()"<< m_DRTImage1MetaInfo->GetCOV()  <<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetOriginLPS()"<< m_DRTImage1MetaInfo->GetOriginLPS()  <<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetProjectionAngleLPS()"<<m_DRTImage1MetaInfo->GetProjectionAngleLPS()<<std::endl;
+//    std::cout<<"m_DRTImage1MetaInfo->GetImageDirectionsLPS()"<< m_DRTImage1MetaInfo->GetImageDirectionsLPS()  <<std::endl;
 
     // SECOND