From 12d02d8cbc13cb26ee49d91b1fabd925aa0050bf Mon Sep 17 00:00:00 2001
From: viar <viar@localhost.localdomain>
Date: Tue, 13 Sep 2022 18:55:56 +0200
Subject: [PATCH] PLEASE CHECK changes in DRTMetaInformation.cpp. Possible
 reason for cut of image?

---
 .../itkDTRrecon/DRTMetaInformation.cpp        |  3 +-
 .../itkDTRrecon/itkImageProcessor.cpp         | 43 ++++++++++---------
 2 files changed, 24 insertions(+), 22 deletions(-)

diff --git a/reg23Topograms/itkDTRrecon/DRTMetaInformation.cpp b/reg23Topograms/itkDTRrecon/DRTMetaInformation.cpp
index d1943e4..4aeaaff 100644
--- a/reg23Topograms/itkDTRrecon/DRTMetaInformation.cpp
+++ b/reg23Topograms/itkDTRrecon/DRTMetaInformation.cpp
@@ -287,7 +287,8 @@ CTVolumeImageMetaInformation::GetProjectionOriginLPSZero(
 
     PointType Origin;
     Origin = this->m_OriginLPS;
-    Origin = Origin - this->m_ImportOffset;
+    // Is this the trick? that cut out images?
+//    Origin = Origin - this->m_ImportOffset;
 
 
     DirectionType IECtoLPS_Directions;
diff --git a/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp b/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp
index 19af153..e5bc174 100644
--- a/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp
+++ b/reg23Topograms/itkDTRrecon/itkImageProcessor.cpp
@@ -157,7 +157,7 @@ itkImageProcessor::itkImageProcessor()
     Point3D[1]=0.;
     Point3D[2]=175.;
     m_DRTGeometryMetaInfo->SetProjectionCenter(Point3D);
-    m_DRTGeometryMetaInfo->SetProjectionCenter(Point3D);
+//    m_DRTGeometryMetaInfo->SetProjectionCenter(Point3D);
     ImageType3D::SizeType
             ImageSize;
     ImageSize[0]=512;
@@ -1649,10 +1649,10 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
 
 //    std::cout<< "///////////////// PGEOM META BEG ///////////////" <<std::endl;
 
-//    std::cout<<"NominalIsocenter IEC"<< m_DRTGeometryMetaInfo->GetProjectionCenter() <<std::endl;
+    std::cout<<"NominalIsocenter IEC"<< m_DRTGeometryMetaInfo->GetProjectionCenter() <<std::endl;
 
-//    std::cout<<"CALIBRATION NominalIsocenter_wZcorrectionLPS "<<NominalIsocenter_wZcorrectionLPS<<std::endl;
-//    std::cout<<"CALIBRATION NominalIsocenterZero_wZcorrectionLPS  "<<NominalIsocenterZero_wZcorrectionLPS<<std::endl;
+    std::cout<<"CALIBRATION NominalIsocenter_wZcorrectionLPS "<<NominalIsocenter_wZcorrectionLPS<<std::endl;
+    std::cout<<"CALIBRATION NominalIsocenterZero_wZcorrectionLPS  "<<NominalIsocenterZero_wZcorrectionLPS<<std::endl;
 
 
     ImageType3D::PointType IsocenterOffsetLPS;
@@ -1661,6 +1661,7 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
                 m_DRTGeometryMetaInfo->GetProjectionCenterOffset1());
 
 
+    std::cout<<"CALIBRATION IsocenterOffsetLPS  "<<IsocenterOffsetLPS<<std::endl;
 
     ImageType3D::PointType CalibratedIsocenterLPS;
 
@@ -1788,13 +1789,13 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
                 NominalIsocenter_wZcorrectionLPS//m_DRTImage2MetaInfo->GetProjectionOriginLPS()
                 );
 
-    std::cout<<"Bounds2: "
-            <<vBounds.data()[0]<<" "
-           <<vBounds.data()[1]<<" "
-          <<vBounds.data()[2]<<" "
-         <<vBounds.data()[3]<<" "
-        <<vBounds.data()[4]<<" "
-       <<vBounds.data()[5]<<std::endl;
+//    std::cout<<"Bounds2: "
+//            <<vBounds.data()[0]<<" "
+//           <<vBounds.data()[1]<<" "
+//          <<vBounds.data()[2]<<" "
+//         <<vBounds.data()[3]<<" "
+//        <<vBounds.data()[4]<<" "
+//       <<vBounds.data()[5]<<std::endl;
 
     m_DRTImage2MetaInfo->SetSizeWithBounds(
                 vBounds.data(),
@@ -1824,16 +1825,16 @@ void itkImageProcessor::UpdateProjectionGeometryMeta(){
                     Std_DRT2LPS)
                 );
 
-    std::cout<<"IsocenterOffsetLPS"<< IsocenterOffsetLPS <<std::endl;
-    std::cout<<"CalibratedIsocenterLPS"<< CalibratedIsocenterLPS  <<std::endl;
-    std::cout<<"CalibratedIsocenterZeroLPS"<< CalibratedIsocenterZeroLPS  <<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetSize()"<< m_DRTImage2MetaInfo->GetSize()  <<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetSpacing()"<< m_DRTImage2MetaInfo->GetSpacing()  <<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetOrigin()"<< m_DRTImage2MetaInfo->GetOrigin()  <<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetCOV()"<< m_DRTImage2MetaInfo->GetCOV()  <<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetOriginLPS()"<< m_DRTImage2MetaInfo->GetOriginLPS()  <<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetProjectionAngleLPS()"<<m_DRTImage2MetaInfo->GetProjectionAngleLPS()<<std::endl;
-    std::cout<<"m_DRTImage2MetaInfo->GetImageDirectionsLPS()"<< m_DRTImage2MetaInfo->GetImageDirectionsLPS()  <<std::endl;
+//    std::cout<<"IsocenterOffsetLPS"<< IsocenterOffsetLPS <<std::endl;
+//    std::cout<<"CalibratedIsocenterLPS"<< CalibratedIsocenterLPS  <<std::endl;
+//    std::cout<<"CalibratedIsocenterZeroLPS"<< CalibratedIsocenterZeroLPS  <<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetSize()"<< m_DRTImage2MetaInfo->GetSize()  <<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetSpacing()"<< m_DRTImage2MetaInfo->GetSpacing()  <<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetOrigin()"<< m_DRTImage2MetaInfo->GetOrigin()  <<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetCOV()"<< m_DRTImage2MetaInfo->GetCOV()  <<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetOriginLPS()"<< m_DRTImage2MetaInfo->GetOriginLPS()  <<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetProjectionAngleLPS()"<<m_DRTImage2MetaInfo->GetProjectionAngleLPS()<<std::endl;
+//    std::cout<<"m_DRTImage2MetaInfo->GetImageDirectionsLPS()"<< m_DRTImage2MetaInfo->GetImageDirectionsLPS()  <<std::endl;