mirror of
https://gitlab.ethz.ch/gfattori/glocalize.git
synced 2026-05-05 22:54:24 +02:00
Giovanni Fattori
143 lines
3.3 KiB
C++
143 lines
3.3 KiB
C++
#ifndef _GPATIENTLOADER_H_
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#define _GPATIENTLOADER_H_
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#include <qobject.h>
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#include <qstring.h>
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#include "gPatientRTGeneralInfos.h"
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//#include "wrkDirParser.h"
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#include <qmainwindow.h>
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#include <qdir.h>
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#include <qthread.h>
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#include <vtkSmartPointer.h>
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#include <vtkImageData.h>
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#include "dicomUtils.h"
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/*_________________________________________________________-
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Patient loader for gLocalize.
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no wrkDir behaviour. just load data
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____________________________________________________________*/
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#include "connectITKVTK.h"
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//#include "itkAnalyzeImageIO.h"
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#include "itkChangeInformationImageFilter.h"
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#include "itkImage.h"
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#include "itkImage.h"
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#include "itkImageFileWriter.h"
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#include "itkOrientImageFilter.h"
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#include "itkPermuteAxesImageFilter.h"
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#include "itkRescaleIntensityImageFilter.h"
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#include "itkImageSeriesReader.h"
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#include "itkGDCMImageIO.h"
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#include "itkGDCMSeriesFileNames.h"
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#include "gdcmIPPSorter.h"
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#ifndef TPATIENTORIENTATION
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#define TPATIENTORIENTATION
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typedef enum {
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NOTDEFINED=0,
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SUPINE = 1,
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PRONE =2
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} t_patientOrientation;
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#endif
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#ifndef PARSERVARIABLES
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#define PARSERVARIABLES
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enum patientErrors {
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NOERRORS,
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PARSER_FOLDER_NOTEXISTING,
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PARSER_FOLDER_EMPTY,
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PARSER_RTPLAN_NOTUNIQUE,
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PARSER_RTPLAN_MISSING,
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PARSER_RTSTRUCT_NOTUNIQUE,
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PARSER_RTSTRUCT_MISSING,
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PARSER_CT_FILES_MISSING,
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PARSER_CT_FAILED_SORTING,
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POPULATE_INCONSISTENT_DATASET,
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POPULATE_NOTEXISTING,
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CLEAR_FOLDER_NOTEXISTING
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};
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enum patientParseOption{
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NOCLEAN,
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CLEAN
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};
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enum patientCleanMode{
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JUSTCLEAR,
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ISLOADINGCHECK
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};
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#endif
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#ifndef _T_REFERENCE_
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#define _T_REFERENCE_
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typedef enum{
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DCMREF=0,
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RTREF=1,
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GOTSREF=2
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}t_reference;
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#endif
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typedef itk::Image<short,3> myImageType;
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class gLoadPatient : public QObject{
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Q_OBJECT
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public:
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gLoadPatient();
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public slots:
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void load(QString p_loadDir);
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void changeRef(int selectedRef);
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private:
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QString loadDir;
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gPatientRTGeneralInfos* patientInfos;
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void loadDICOM(std::vector<std::string> CTfilenames);
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void connectToVTK();
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void actualizeOut();
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void parse(QString p_loadDir);
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t_patientOrientation m_patientOrientation;
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vtkSmartPointer <vtkImageData> vol3D;
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myImageType::Pointer myImage;
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itk::ImageSeriesReader<myImageType>::Pointer rDICOM;
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itk::GDCMImageIO::Pointer iGDCMimage ;
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itk::GDCMSeriesFileNames::Pointer myDICOMseries;
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myImageType::DirectionType imageDir;
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myImageType::PointType origin;
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myImageType::SizeType sizeOfImage;
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myImageType::PointType trueOffset;
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myImageType::PointType trueOffset_rot;
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myImageType::PointType trueOffset_rot_prev;
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myImageType::DirectionType directionToWCS;
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bool initialized;
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vtkSmartPointer<vtkImageImport> out;
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itk::VTKImageExport <myImageType>::Pointer in;
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RTPlan * readRT;
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double* m_rtIsocenter;
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bool virtualIso;
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t_reference m_reference;
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signals:
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void folderIsEmpty();
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void statusInfo(QString msg);
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void parse_result(int result, gPatientRTGeneralInfos* patientInfos);
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void loadFail(QString msg);
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void loadEnd(vtkImageData* vol);
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void loadedRTIso(double *iso);
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void loadedVolBBox(double* bbox, double* spacing, int* dimension);
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void referenceChange(double dx, double dy, double dz);
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void virtualIsoTested(bool virtualIso);
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};
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#endif
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