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slsDetectorPackage/slsDetectorCalibration/moench03ReadData.C

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#include <TH1D.h>
#include <TH2D.h>
#include <TPad.h>
#include <TDirectory.h>
#include <TEntryList.h>
#include <TFile.h>
#include <TMath.h>
#include <TTree.h>
#include <TChain.h>
#include <THStack.h>
#include <TCanvas.h>
#include <TF1.h>
#include <stdio.h>
//#include <deque>
//#include <list>
//#include <queue>
#include <map>
#include <fstream>
#include <sys/stat.h>
#include "moench03CtbData.h"
#include "moench03CommonMode.h"
#define MYROOT1
#include "singlePhotonDetector.h"
//#include "MovingStat.h"
using namespace std;
#define NC 400
#define NR 400
#define MY_DEBUG 1
#ifdef MY_DEBUG
#include <TCanvas.h>
#endif
TH2F *readImage(ifstream &filebin, TH2F *h2=NULL, TH2F *hped=NULL) {
moench03CtbData *decoder=new moench03CtbData();
char *buff=decoder->readNextFrame(filebin);
// TH1F *h1=new TH1F("h1","",400*400,0,400*400);
// int ip=0;
if (buff) {
if (h2==NULL) {
h2=new TH2F("h2","",400,0,400,400,0,400);
h2->SetStats(kFALSE);
}
cout << "." << endl;
for (int ix=0; ix<400; ix++) {
for (int iy=0; iy<400; iy++) {
// cout << decoder->getDataSize() << " " << decoder->getValue(buff,ix,iy)<< endl;
h2->SetBinContent(ix+1,iy+1,decoder->getValue(buff,ix,iy));
// h1->SetBinContent(++ip,decoder->getValue(buff,ix,iy));
}
}
if (hped) h2->Add(hped,-1);
return h2;
}
return NULL;
}
TH2F *readImage(char *fname, int iframe=0, TH2F *hped=NULL) {
ifstream filebin;
filebin.open((const char *)(fname), ios::in | ios::binary);
TH2F *h2=new TH2F("h2","",400,0,400,400,0,400);
TH2F *hh;
hh=readImage(filebin, h2, hped );
if (hh==NULL) {
delete h2;
return NULL;
}
for (int i=0; i<iframe; i++) {
if (hh==NULL) break;
hh=readImage(filebin, h2, hped );
if (hh)
cout << "="<< endl;
else {
delete h2;
return NULL;
}
}
if (filebin.is_open())
filebin.close();
if (hped!=NULL)
h2->Add(hped,-1);
return h2;
}
TH2F *calcPedestal(char *fformat, int runmin, int runmax){
ifstream filebin;
char fname[10000];
moench03CtbData *decoder=new moench03CtbData();
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, 1, NULL);
char *buff;
int ix,iy;
int ii=0;
TH2F* h2=NULL;
for (int irun=runmin; irun<=runmax; irun++) {
sprintf(fname,fformat,irun);
filebin.open((const char *)(fname), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))) {
for (ix=0; ix<400; ix++) {
for (iy=0; iy<400; iy++) {
filter->addToPedestal(decoder->getValue(buff,ix,iy), ix, iy);
}
}
delete [] buff;
cout << "="<< endl;
ii++;
}
if (filebin.is_open())
filebin.close();
}
if (ii>0) {
h2=new TH2F("hped","",400,0,400,400,0,400);
for (ix=0; ix<400; ix++) {
for (iy=0; iy<400; iy++) {
h2->SetBinContent(ix+1, iy+1,filter->getPedestal(ix,iy));
}
}
}
return h2;
}
/******************************************************************************/
TH2F * calcNoiseRMS(char *fformat, int runmin, int runmax){
ifstream filebin;
char fname[10000];
moench03CtbData *decoder=new moench03CtbData();
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, 1, NULL);
char *buff;
int ix,iy;
int ii=0;
TH2F* h2=NULL;
for (int irun=runmin; irun<=runmax; irun++) {
sprintf(fname,fformat,irun);
filebin.open((const char *)(fname), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))) {
for (ix=0; ix<400; ix++) {
for (iy=0; iy<400; iy++) {
filter->addToPedestal(decoder->getValue(buff,ix,iy), ix, iy);
}
}
delete [] buff;
cout << "="<< endl;
ii++;
}
if (filebin.is_open())
filebin.close();
}
if (ii>0) {
h2=new TH2F("hped","",400,0,400,400,0,400);
for (ix=0; ix<400; ix++) {
for (iy=0; iy<400; iy++) {
h2->SetBinContent(ix+1, iy+1,filter->getPedestalRMS(ix,iy));
}
}
}
return h2;
}
/**********************************************************************************/
THStack * calcNoise(char *fformat,std::string flag, int runmin, int runmax, int nfiles){
std::map<int,TH1F *> pixelMap;
cerr<<"Creating pedestal map for frames: "<<flag<<endl;
cerr<<"/***************************************/"<<endl;
THStack * hs = new THStack();
int n(2);
int r(0);
if(flag=="even"){
n=2;
r=0;
}else if(flag=="odd"){
n=2;
r=1;
}else if(flag=="all"){
n=1;
r=0;
}
ifstream filebin;
char fname[10000];
moench03CtbData *decoder=new moench03CtbData();
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, 1, NULL);
char *buff;
int ix,iy;
int ii=0;
TH2F* hped=NULL;
TH2F* hnoise=NULL;
int ibin(0);
int iframe(0);
Float_t sigma(0.);
int filefound(0);
pixelMap.clear();
for (int irun=runmin; irun<=runmax; irun++) {
sprintf(fname,fformat,irun);
if( access(fname,F_OK) != -1){
if(filefound<nfiles){
filebin.open((const char *)(fname), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))) {
iframe=decoder->getFrameNumber(buff);
if(iframe%n==r){
for (ix=0; ix<400; ix++) {
for (iy=0; iy<400; iy++) {
ibin = ix*NR+iy;
if(pixelMap.find(ibin)!=pixelMap.end()){
pixelMap[ibin]->Fill(decoder->getValue(buff,ix,iy));
}else{
pixelMap[ibin] = new TH1F(Form("h_%d",ibin),Form("h_%d",ibin),8000,-0.5,15999.5);
}
}
}
}
delete [] buff;
if(ii%1000==0)cout << "="<<ii<< endl;
ii++;
}
if (filebin.is_open())
filebin.close();
filefound++;
}else{
break;
}
}else{//end chek if file exists
cerr<<fname<<" does not exist!"<<endl;
}
}
if(ii>0){
hped=new TH2F("hped","",400,-0.5,399.5,400,-0.5,399.5);
hnoise=new TH2F("hnoise","",400,-0.5,399.5,400,-0.5,399.5);
hs->Add(hped);
hs->Add(hnoise);
Float_t p(0.);
Float_t perr(0.);
Float_t amp(0.);
Float_t sigmaerr(0.);
for(ix=0; ix<400; ix++){
for (iy=0; iy<400; iy++){
sigma=0.;
sigmaerr=0.;
p=0.;
perr=0.;
ibin = ix*NR+iy;
if(ibin%1000==0)cerr<<ibin<<endl;
if(pixelMap.find(ibin)!=pixelMap.end()){
// cerr<<"/****************/"<<endl;
// cerr<<"("<<ix<<","<<iy<<")"<<endl;
p=pixelMap[ibin]->GetBinCenter(pixelMap[ibin]->GetMaximumBin());
// cerr<<"peak: "<<p<<endl;
amp=pixelMap[ibin]->GetBinContent(pixelMap[ibin]->GetMaximumBin());
sigma=pixelMap[ibin]->GetRMS();
TF1 * g = new TF1("g","gaus(0)",p-sigma,p+sigma);
g->SetParameters(amp,p,sigma);
g->SetParLimits(1,p-sigma,p+sigma);
g->SetParLimits(2,0.1*sigma,2.*sigma);
pixelMap[ibin]->Fit(g,"RQN0");
p=g->GetParameter(1);
perr=g->GetParError(1);
sigma=g->GetParameter(2);
sigmaerr=g->GetParError(2);
// cerr<<"sigma: "<<sigma<<endl;
delete g;
delete pixelMap[ibin];
}
hped->SetBinContent(ix+1,iy+1,p);
hped->SetBinError(ix+1,iy+1,perr);
hnoise->SetBinContent(ix+1,iy+1,sigma);
hnoise->SetBinError(ix+1,iy+1,sigmaerr);
}
}
}
return hs;
}
/****************************************************/
THStack * DrawFrames(char *fformat,int framemin, int framemax){
int nbins(400);
int xmin(0);
int xmax(400);
THStack * hs = new THStack();
ifstream filebin;
char fname[10000];
moench03CtbData *decoder=new moench03CtbData();
char *buff;
int ix,iy;
int iframe(0);
if(access(fformat,F_OK) != -1){
filebin.open((const char *)(fformat), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))) {
iframe=decoder->getFrameNumber(buff);
if(iframe>=framemin && iframe<framemax){//check on frames
ix=0;
iy=0;
TH2F * h = new TH2F(Form("h_%d",iframe),Form("h_%d",iframe),nbins,xmin,xmax,nbins,xmin,xmax);
for(ix=xmin; ix<xmax; ix++){//loop on pixels
for(iy=xmin; iy<xmax; iy++){
h->SetBinContent(ix+1,iy+1,decoder->getValue(buff,ix,iy));
}
}//end loop on pixels
hs->Add(h);
}//end check on frames
delete [] buff;
}
}else{//check if file exists
cerr<<fformat<<" does not exists!"<<endl;
}
return hs;
}
/****************************************************/
TH1F * SinglePixelHisto(char *fformat,int nbins, float xmin, float xmax, int runmin, int runmax, int x0, int y0){
moench03CtbData *decoder=new moench03CtbData();
cout << "decoder allocated " << endl;
TH1F * _hout = new TH1F("hpix","",nbins,xmin,xmax);
char *buff;
char fname[10000];
ifstream filebin;
int iframe(0);
for (int irun=runmin; irun<=runmax; irun++){//loop on files
sprintf(fname,fformat,irun);
iframe=0;
if( access(fname,F_OK) != -1){//check if file exists
filebin.open((const char *)(fname), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))){
iframe=decoder->getFrameNumber(buff);
if(iframe%1000==0) cerr<<iframe<<" frames"<<endl;
_hout->Fill(decoder->getValue(buff,x0,y0));
delete [] buff;
}//end readout of frame
}else{//end check on file
cerr<<fname<<" does not exists!"<<endl;
}
if(filebin.is_open()) filebin.close();
}//end loop on files
return _hout;
}
/****************************************************/
void DrawAllPixelCorrelation(char *fformat, std::string frame,int runmin, int runmax, int xmin, int xmax, int ymin, int ymax, int sc_width,TH2F* hcorr){
int cmsub(0);
moench03CtbData *decoder=new moench03CtbData();
cout << "decoder allocated " << endl;
moench03CommonMode *cmSub=NULL;
if (cmsub) {
cmSub=new moench03CommonMode(100);
cout << "common mode allocated " << endl;
} else {
cout << "non allocating common mode " << endl;
}
int n(2);
int r(0);
if(frame=="even"){
n=2;
r=0;
}else if(frame=="odd"){
n=2;
r=1;
}else if(frame=="all"){
n=1;
r=0;
}
int sign(1);
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, sign, cmSub, 1000, 100);
char *buff;
char fname[10000];
float pix1(0.);
float pix2(0.);
ifstream filebin;
int iframe(0);
for (int irun=runmin; irun<=runmax; irun++){//loop on files
sprintf(fname,fformat,irun);
iframe=0;
pix1=0.;
pix2=0.;
if( access(fname,F_OK) != -1){//check if file exists
filebin.open((const char *)(fname), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))){//loop on frames
iframe=decoder->getFrameNumber(buff);
if(iframe%n==r){//check if frame is even or odd
for(int ix=xmin; ix<xmax; ix++){//loop on pixels
for(int iy=ymin; iy<ymax; iy++){
if((ix+1)%sc_width != 0){//check that pixel is not at the edge of supercolumn
pix1=decoder->getValue(buff,ix,iy);
pix2=decoder->getValue(buff,ix+1,iy);
hcorr->Fill(pix1,pix2);
}//end check on s_c edge
}
}//end loop on pixels
}//edn check on frame number
delete [] buff;
}//end loop on frames
}else{//end check if file exists
cerr<<fname<<" does not exist!"<<endl;
}
if(filebin.is_open())filebin.close();
}//end loop on files
return;
}
/***************************************************/
void DrawPixelCorrelation(char *fformat, std::string frame,int runmin, int runmax, int px, int py,TH1F * h1,TH1F * h2, TH2F * hcorr){
int cmsub(0);
moench03CtbData *decoder=new moench03CtbData();
cout << "decoder allocated " << endl;
moench03CommonMode *cmSub=NULL;
if (cmsub) {
cmSub=new moench03CommonMode(100);
cout << "common mode allocated " << endl;
} else {
cout << "non allocating common mode " << endl;
}
int n(2);
int r(0);
if(frame=="even"){
n=2;
r=0;
}else if(frame=="odd"){
n=2;
r=1;
}else if(frame=="all"){
n=1;
r=0;
}
int sign(1);
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, sign, cmSub, 1000, 100);
char *buff;
char fname[10000];
float pix1(0.);
float pix2(0.);
ifstream filebin;
int ii=0;
int iframe(0);
for (int irun=runmin; irun<=runmax; irun++){//loop on files
sprintf(fname,fformat,irun);
pix1=0.;
pix2=0.;
iframe=0;
if( access(fname,F_OK) != -1){//check if file exists
filebin.open((const char *)(fname), ios::in | ios::binary);
while ((buff=decoder->readNextFrame(filebin))){//loop on frames
iframe=decoder->getFrameNumber(buff);
if(iframe%n==r){
pix1=decoder->getValue(buff,px,py);
pix2=decoder->getValue(buff,px+1,py);
h1->Fill(pix1);
h2->Fill(pix2);
hcorr->Fill(pix1,pix2);
delete [] buff;
}
if(ii%1000==0)cerr<<"reading frame "<<ii<<endl;
ii++;
}//end loop on frames
if(filebin.is_open())filebin.close();
}else{//end check on file
cerr<<fname<<" does not exists!"<<endl;
}
if(filebin.is_open())filebin.close();
}//end loop on files
return;
}
/**
Loops over data file to find single photons, fills the tree (and writes it to file, althoug the root file should be opened before) and creates 1x1, 2x2, 3x3 cluster histograms with ADCu on the x axis, channel number (160*x+y) on the y axis.
\param fformat file name format
\param tit title of the tree etc.
\param runmin minimum run number
\param runmax max run number
\param nbins number of bins for spectrum hists
\param hmin histo minimum for spectrum hists
\param hmax histo maximum for spectrum hists
\param sign sign of the spectrum to find hits
\param hc readout correlation coefficient with previous pixel
\param xmin minimum x coordinate
\param xmax maximum x coordinate
\param ymin minimum y coordinate
\param ymax maximum y coordinate
\param cmsub enable commonmode subtraction
\returns pointer to histo stack with cluster spectra
*/
THStack *moench03ReadData(char *fformat, char *tit, int runmin, int runmax, int nbins=1500, int hmin=-500, int hmax=1000, int xmin=1, int xmax=NC-1, int ymin=1, int ymax=NR-1, int cmsub=0, int hitfinder=1) {
double hc(0);
int sign(1);
moench03CtbData *decoder=new moench03CtbData();
cout << "decoder allocated " << endl;
moench03CommonMode *cmSub=NULL;
if (cmsub) {
cmSub=new moench03CommonMode(100);
cout << "common mode allocated " << endl;
} else {
cout << "non allocating common mode " << endl;
}
int iev=0;
int nph=0;
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, sign, cmSub, 1000, 100);
cout << "filter allocated " << endl;
char *buff;
char fname[10000];
int nf=0;
eventType thisEvent=PEDESTAL;
// int iframe;
// double *data, ped, sigma;
// data=decoder->getCluster();
THStack *hs=new THStack("hs",fformat);
cout << "hstack allocated " << endl;
TH2F *h1=new TH2F("h1",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
hs->Add(h1);
cout << "h1 allocated " << endl;
// TH2F *h2=NULL;
// TH2F *h3=NULL;
if (hitfinder) {
// h2=new TH2F("h2",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
// cout << "h2 allocated " << endl;
// h3=new TH2F("h3",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
// cout << "h3 allocated " << endl;
// // hetaX=new TH2F("hetaX",tit,nbins,-1,2,NC*NR,-0.5,NC*NR-0.5);
// // hetaY=new TH2F("hetaY",tit,nbins,-1,2,NC*NR,-0.5,NC*NR-0.5);
// hs->Add(h2);
// hs->Add(h3);
// hs->Add(hetaX);
// hs->Add(hetaY);
}
if (hs->GetHists()) {
for (int i=0; i<1; i++)
if (hs->GetHists()->At(i)) cout << i << " " ;
cout << " histos allocated " << endl;
} else
cout << "no hists in stack " << endl;
int ix=20, iy=20, ir, ic;
int adc(0);
ifstream filebin;
Int_t iFrame;
TTree *tall;
if (hitfinder){
tall=filter->initEventTree(tit, &iFrame);
}
#ifdef MY_DEBUG
cout << "debug mode " << endl;
TCanvas *myC;
TH2F *he;
TCanvas *cH1;
// TCanvas *cH2;
// TCanvas *cH3;
cH1=new TCanvas("ch1");
cH1->SetLogz();
h1->Draw("colz");
if (hitfinder) {
myC=new TCanvas("myc");
he=new TH2F("he","Event Mask",xmax-xmin, xmin, xmax, ymax-ymin, ymin, ymax);
he->SetStats(kFALSE);
he->Draw("colz");
// cH2=new TCanvas("ch2");
// cH2->SetLogz();
// h2->Draw("colz");
// cH3=new TCanvas("ch3");
// cH3->SetLogz();
// h3->Draw("colz");
}
#endif
filter->newDataSet();
for (int irun=runmin; irun<runmax; irun++) {
sprintf(fname,fformat,irun);
cout << "file name " << fname << endl;
if( access(fname,F_OK) != -1){//check if file exists
filebin.open((const char *)(fname), ios::in | ios::binary);
nph=0;
while ( (buff=decoder->readNextFrame(filebin))) {//getting frames on the buffer
if (hitfinder) {
filter->newFrame();
//calculate pedestals and common modes
if (cmsub) {
// cout << "cm" << endl;
for (ix=xmin; ix<xmax+1; ix++)
for (iy=ymin; iy<ymax+1; iy++) {
thisEvent=filter->getEventType(buff, ix, iy,0);
}//loop on pixels
}//end if cmsub
}//end if hitfinder
// cout << "new frame " << endl;
for (ix=xmin; ix<xmax+1; ix++)
for (iy=ymin; iy<ymax+1; iy++) {
// cout << ix << " " << iy << endl;
thisEvent=filter->getEventType(buff, ix, iy, cmsub);
iFrame=decoder->getFrameNumber(buff);
#ifdef MY_DEBUG
if (hitfinder) {
// if (iev%10==0)
he->SetBinContent(ix+1-xmin, iy+1-ymin, (int)thisEvent);
}
#endif
// if (nf>10) {
h1->Fill(filter->getClusterTotal(1), iy+NR*ix);
if (hitfinder) {
if (thisEvent==PHOTON_MAX ) {
nph++;
// h2->Fill(filter->getClusterTotal(2), iy+NR*ix);
// h3->Fill(filter->getClusterTotal(3), iy+NR*ix);
tall->Fill();
}//end if PHOTON_MAX
}//end if hitfinder
}//end loop on pixels
//////////////////////////////////////////////////////////
#ifdef MY_DEBUG
// cout << iev << " " << h1->GetEntries() << " " << h2->GetEntries() << endl;
// if (iev%10==0) {
// myC->Modified();
// myC->Update();
// cH1->Modified();
// cH1->Update();
// cH2->Modified();
// cH2->Update();
// cH3->Modified();
// cH3->Update();
// }
iev++;
#endif
nf++;
cout << "=" ;
delete [] buff;
}//end frame
cout << nph <<" Photons found"<< endl;
if (filebin.is_open())
filebin.close();
else
cout << "could not open file " << fname << endl;
}else{
cerr<<"File does not exist"<<endl;
}//end check on file path
}//end loop on files
if (hitfinder){
tall->Write(tall->GetName(),TObject::kOverwrite);
}
//////////////////////////////////////////////////////////
#ifdef MY_DEBUG
if(hitfinder){
myC->Modified();
myC->Update();
}
cH1->Modified();
cH1->Update();
// cH2->Modified();
// cH2->Update();
// cH3->Modified();
// cH3->Update();
#endif
delete decoder;
cout << "Read " << nf << " frames" << endl;
return hs;
}
/*********************************************************************************************/
THStack *moench03ReadDataEvenOdd(char *fformat, char *tit, int runmin, int runmax, int nbins=1500, int hmin=-500, int hmax=1000, int xmin=1, int xmax=NC-1, int ymin=1, int ymax=NR-1, int cmsub=0, int hitfinder=1){
double hc(0);
int sign(1);
moench03CtbData *decoder=new moench03CtbData();
cout << "decoder allocated " << endl;
moench03CommonMode *cmSub=NULL;
if (cmsub) {
cmSub=new moench03CommonMode(100);
cout << "common mode allocated " << endl;
} else {
cout << "non allocating common mode " << endl;
}
int iev=0;
int nph=0;
singlePhotonDetector<uint16_t> *filterEven=new singlePhotonDetector<uint16_t>(decoder, 3, 5, sign, cmSub, 1000, 100);
cout << "filter for even frames allocated " << endl;
singlePhotonDetector<uint16_t> *filterOdd=new singlePhotonDetector<uint16_t>(decoder, 3, 5, sign, cmSub, 1000, 100);
cout << "filter for odd frames allocated " << endl;
char *buff;
char fname[10000];
int nf=0;
eventType thisEvent=PEDESTAL;
// int iframe;
// double *data, ped, sigma;
// data=decoder->getCluster();
THStack *hs=new THStack("hs",fformat);
cout << "hstack allocated " << endl;
TH2F *h1=new TH2F("h1",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
hs->Add(h1);
cout << "h1 allocated " << endl;
TH2F *h2=NULL;
TH2F *h3=NULL;
if (hitfinder) {
h2=new TH2F("h2",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
cout << "h2 allocated " << endl;
h3=new TH2F("h3",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
cout << "h3 allocated " << endl;
// hetaX=new TH2F("hetaX",tit,nbins,-1,2,NC*NR,-0.5,NC*NR-0.5);
// hetaY=new TH2F("hetaY",tit,nbins,-1,2,NC*NR,-0.5,NC*NR-0.5);
hs->Add(h2);
hs->Add(h3);
// hs->Add(hetaX);
// hs->Add(hetaY);
}
if (hs->GetHists()) {
for (int i=0; i<3; i++)
if (hs->GetHists()->At(i)) cout << i << " " ;
cout << " histos allocated " << endl;
} else
cout << "no hists in stack " << endl;
ifstream filebin;
int ix=20, iy=20, ir, ic;
Int_t iFrame;
TTree *tEven;
TTree *tOdd;
if (hitfinder){
tEven=filterEven->initEventTree(Form("%s_Even",tit), &iFrame);
cout<< "TTree for even frames initialized"<<endl;
tOdd=filterOdd->initEventTree(Form("%s_Odd",tit), &iFrame);
cout<< "TTree for odd frames initialized"<<endl;
}
#ifdef MY_DEBUG
cout << "debug mode " << endl;
TCanvas *myC;
TH2F *he;
TCanvas *cH1;
TCanvas *cH2;
TCanvas *cH3;
if (hitfinder) {
myC=new TCanvas("myc");
he=new TH2F("he","Event Mask",xmax-xmin, xmin, xmax, ymax-ymin, ymin, ymax);
he->SetStats(kFALSE);
he->Draw("colz");
cH1=new TCanvas("ch1");
cH1->SetLogz();
h1->Draw("colz");
cH2=new TCanvas("ch2");
cH2->SetLogz();
h2->Draw("colz");
cH3=new TCanvas("ch3");
cH3->SetLogz();
h3->Draw("colz");
cout<<"Canvas allocated"<<endl;
}
#endif
filterEven->newDataSet();
filterOdd->newDataSet();
for (int irun=runmin; irun<runmax; irun++) {
sprintf(fname,fformat,irun);
cout << "file name " << fname << endl;
filebin.open((const char *)(fname), ios::in | ios::binary);
nph=0;
while ((buff=decoder->readNextFrame(filebin))) {
iFrame=decoder->getFrameNumber(buff);
if (hitfinder) {
if(iFrame%2==0){
filterEven->newFrame();
}else{
filterOdd->newFrame();
}
//calculate pedestals and common modes
if (cmsub) {
// cout << "cm" << endl;
for (ix=xmin-1; ix<xmax+1; ix++)
for (iy=ymin-1; iy<ymax+1; iy++) {
if(iFrame%2==0){
thisEvent=filterEven->getEventType(buff, ix, iy,0);
}else{
thisEvent=filterOdd->getEventType(buff, ix, iy,0);
}
}
}
}
// cout << "new frame " << endl;
for (ix=xmin-1; ix<xmax+1; ix++)
for (iy=ymin-1; iy<ymax+1; iy++) {
if(iFrame%2==0){
thisEvent=filterEven->getEventType(buff, ix, iy, cmsub);
}else{
thisEvent=filterOdd->getEventType(buff, ix, iy,cmsub);
}
#ifdef MY_DEBUG
if (hitfinder) {
he->SetBinContent(ix+1-xmin, iy+1-ymin, (int)thisEvent);
}
#endif
if(iFrame%2==0){
h1->Fill(filterEven->getClusterTotal(1), iy+NR*ix);
}else{
h1->Fill(filterOdd->getClusterTotal(1), iy+NR*ix);
}
if (hitfinder) {
if (thisEvent==PHOTON_MAX ) {
nph++;
if(iFrame%2==0){
h2->Fill(filterEven->getClusterTotal(2), iy+NR*ix);
h3->Fill(filterEven->getClusterTotal(3), iy+NR*ix);
tEven->Fill();
}else{
h2->Fill(filterOdd->getClusterTotal(2), iy+NR*ix);
h3->Fill(filterOdd->getClusterTotal(3), iy+NR*ix);
tOdd->Fill();
}
}
}
// }
}
//////////////////////////////////////////////////////////
#ifdef MY_DEBUG
// cout << iev << " " << h1->GetEntries() << " " << h2->GetEntries() << endl;
// if (iev%10==0) {
// myC->Modified();
// myC->Update();
// cH1->Modified();
// cH1->Update();
// cH2->Modified();
// cH2->Update();
// cH3->Modified();
// cH3->Update();
// }
iev++;
#endif
nf++;
cout << "=" ;
delete [] buff;
}
cout << nph << endl;
if (filebin.is_open())
filebin.close();
else
cout << "could not open file " << fname << endl;
}
if (hitfinder){
tEven->Write(tEven->GetName(),TObject::kOverwrite);
tOdd->Write(tOdd->GetName(),TObject::kOverwrite);
}
//////////////////////////////////////////////////////////
#ifdef MY_DEBUG
myC->Modified();
myC->Update();
cH1->Modified();
cH1->Update();
cH2->Modified();
cH2->Update();
cH3->Modified();
cH3->Update();
#endif
delete decoder;
cout << "Read " << nf << " frames" << endl;
return hs;
}
/***********************************************************************************/
Int_t moench03DrawPedestals(char *fformat, char *tit, int runmin, int runmax, int nbins=1500, int hmin=-500, int hmax=1000, int xmin=1, int xmax=NC-1, int ymin=1, int ymax=NR-1, int cmsub=0, int hitfinder=1){
double hc(0);
int sign(1);
moench03CtbData *decoder=new moench03CtbData();
cout << "decoder allocated " << endl;
moench03CommonMode *cmSub=NULL;
if (cmsub) {
cmSub=new moench03CommonMode(100);
cout << "common mode allocated " << endl;
} else {
cout << "non allocating common mode " << endl;
}
int iev=0;
int nph=0;
singlePhotonDetector<uint16_t> *filter=new singlePhotonDetector<uint16_t>(decoder, 3, 5, sign, cmSub, 1000, 100);
cout << "filter allocated " << endl;
char *buff;
char fname[10000];
int nf=0;
eventType thisEvent=PEDESTAL;
int iFrame(0);
// int iframe;
// double *data, ped, sigma;
// data=decoder->getCluster();
int nChx(xmax-xmin+2);
int nChy(ymax-ymin+2);
TH1F * HistoMap_All[nChx][nChy];
TH1F * HistoMap_Even[nChx][nChy];
TH1F * HistoMap_Odd[nChx][nChy];
for(Int_t ix=0; ix<nChx; ix++){
for(Int_t iy=0; iy<nChy; iy++){
HistoMap_All[ix][iy] = new TH1F(Form("h_%d_%d_All",ix+xmin,iy+ymin),"",8000,0,16000);
HistoMap_Even[ix][iy] = new TH1F(Form("h_%d_%d_Even",ix+xmin,iy+ymin),"",8000,0,16000);
HistoMap_Odd[ix][iy] = new TH1F(Form("h_%d_%d_Odd",ix+xmin,iy+ymin),"",8000,0,16000);
}
}
filter->newDataSet();
float adc(0.);
ifstream filebin;
for (int irun=runmin; irun<runmax; irun++) {
sprintf(fname,fformat,irun);
cout << "file name " << fname << endl;
filebin.open((const char *)(fname), ios::in | ios::binary);
nph=0;
while ((buff=decoder->readNextFrame(filebin))) {
iFrame=decoder->getFrameNumber(buff);
filter->newFrame();
for(Int_t ix=0; ix<nChx; ix++){//loop on pixels
for(Int_t iy=0; iy<nChy; iy++){
thisEvent=filter->getEventType(buff, ix+xmin, iy+ymin,cmsub);
adc=decoder->getValue(buff,ix+xmin,iy+ymin);
HistoMap_All[ix][iy]->Fill(adc);
if(iFrame%2==0){
HistoMap_Even[ix][iy]->Fill(adc);
}else{
HistoMap_Odd[ix][iy]->Fill(adc);
}
}
}//end loop on pixels
}
if (filebin.is_open())
filebin.close();
else
cout << "could not open file " << fname << endl;
}//end loop on files
for(Int_t ix=0; ix<nChx; ix++){
for(Int_t iy=0; iy<nChy; iy++){
HistoMap_All[ix][iy]->Write();
HistoMap_Even[ix][iy]->Write();
HistoMap_Odd[ix][iy]->Write();
}
}
delete decoder;
return 1;
}
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