zmq fixed WIP

.clang-format

@@ -4,4 +4,3 @@ IndentWidth: 4
 UseTab: Never
 ColumnLimit: 80
 AlignConsecutiveAssignments: false 
-AlignConsecutiveMacros: true

.clang-tidy

@@ -1,24 +1,16 @@
 ---
 Checks:          '*, 
-                    -altera-*,
                     -android-cloexec-fopen,
                     -cppcoreguidelines-pro-bounds-array-to-pointer-decay, 
                     -cppcoreguidelines-pro-bounds-pointer-arithmetic, 
                     -fuchsia*,
                     -readability-else-after-return,
                     -readability-avoid-const-params-in-decls,
-                    -readability-identifier-length,
                     -cppcoreguidelines-pro-bounds-constant-array-index,
                     -cppcoreguidelines-pro-type-reinterpret-cast,
                     -llvm-header-guard,
-                    -modernize-use-nodiscard,
-                    -misc-non-private-member-variables-in-classes,
                     -readability-static-accessed-through-instance,
                     -readability-braces-around-statements,
-                    -readability-isolate-declaration,
-                    -readability-implicit-bool-conversion,
-                    -readability-identifier-length,
-                    -readability-identifier-naming,
                     -hicpp-signed-bitwise,
                     -hicpp-no-array-decay, 
                     -hicpp-braces-around-statements,
@@ -26,7 +18,7 @@ Checks:          '*,
                     -google-readability-todo, 
                     -google-readability-braces-around-statements,
                     -modernize-use-trailing-return-type,
-                    -llvmlibc-*'
+                    -readability-isolate-declaration'
 
 HeaderFilterRegex: \.h
 AnalyzeTemporaryDtors: false

.github/ISSUE_TEMPLATE/bug_report.md

@@ -1,42 +0,0 @@
----
-name: Bug Report
-about: Create a report to help us improve 
-title: New Bug Report
-labels: action - Bug, priority - Unclassified, status - Pending
-template: bug_report.md
----
-<!-- Preview changes before submitting -->
-<!-- Please fill out everything with an *, as this report will be discarded otherwise -->
-<!-- This is a comment, the syntax is a bit different from c++ or bash -->
-
-##### *Distribution: 
-<!-- RHEL7, RHEL6, Fedora, etc -->
-
-
-##### *Detector type: 
-<!-- If applicable, Eiger, Jungfrau, Mythen3, Gotthard2, Gotthard, Moench, ChipTestBoard -->
-
-##### *Software Package Version: 
-<!-- developer, 4.2.0, 4.1.1, etc -->
-
-##### Priority:
-<!-- Super Low, Low, Medium, High, Super High -->
-
-##### *Describe the bug
-<!--  A clear and concise description of what the bug is -->
-
-##### Expected behavior
-<!--  A clear and concise description of what you expected to happen. -->
-
-##### To Reproduce
-<!--  Steps to reproduce the behavior: -->
-<!--  1. Go to '...' -->
-<!--  2. Click on '....' -->
-<!--  3. Scroll down to '....' -->
-<!--  4. See error -->
-
-##### Screenshots
-<!--  If applicable, add screenshots to help explain your problem. -->
-
-##### Additional context
-<!--  Add any other context about the problem here. -->

.github/ISSUE_TEMPLATE/change_request.md

@@ -1,28 +0,0 @@
----
-name: Change Request
-about: Suggest a change to an existing feature
-title: New Change Request
-labels: action - Change, priority - Unclassified, status - Pending
-template: change_request.md
----
-<!-- Preview changes before submitting -->
-<!-- Please fill out everything with an *, as this report will be discarded otherwise -->
-<!-- This is a comment, the syntax is a bit different from c++ or bash -->
-
-##### *Detector type: 
-<!-- If applicable, Eiger, Jungfrau, Mythen3, Gotthard2, Gotthard, Moench, ChipTestBoard -->
-
-##### *Software Package Version: 
-<!-- developer, 4.2.0, 4.1.1, etc -->
-
-##### Priority:
-<!-- Super Low, Low, Medium, High, Super High -->
-
-##### *State the change request:
-<!--  A clear and concise description of what the change is to an existing feature -->
-
-##### Is your change request related to a problem. Please describe:
-<!-- A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] -->
-
-##### Additional context:
-<!--  Add any other context about the feature here -->

.github/ISSUE_TEMPLATE/config.yml

@@ -1 +0,0 @@
-blank_issues_enabled: false

.github/ISSUE_TEMPLATE/feature_request.md

@@ -1,34 +0,0 @@
----
-name: Feature Request
-about: Suggest a feature, documentation or submit a question
-title: New Feature Request
-labels: action - Enhancement, priority - Unclassified, status - Pending
-template: feature_request.md
----
-<!-- Preview changes before submitting -->
-<!-- Please fill out everything with an *, as this report will be discarded otherwise -->
-<!-- This is a comment, the syntax is a bit different from c++ or bash -->
-
-##### *Detector type: 
-<!-- If applicable, Eiger, Jungfrau, Mythen3, Gotthard2, Gotthard, Moench, ChipTestBoard -->
-
-##### *Software Package Version: 
-<!-- developer, 4.2.0, 4.1.1, etc -->
-
-##### Priority:
-<!-- Super Low, Low, Medium, High, Super High -->
-
-##### *State the feature:
-<!--  A clear and concise description of what the feature is -->
-
-##### Is your feature request related to a problem. Please describe:
-<!-- A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] -->
-
-##### Describe the solution you'd like:
-<!-- A clear and concise description of what you want to happen -->
-
-##### Describe alternatives you've considered:
-<!-- A clear and concise description of any alternative solutions or features you've considered -->
-
-##### Additional context:
-<!--  Add any other context about the feature here -->

.github/workflows/cmake.yml

@@ -1,38 +0,0 @@
-name: CMake
-
-on: [push, pull_request]
-
-env:
-  # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.)
-  BUILD_TYPE: Debug
-
-jobs:
-  build:
-    # The CMake configure and build commands are platform agnostic and should work equally well on Windows or Mac.
-    # You can convert this to a matrix build if you need cross-platform coverage.
-    # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix
-    runs-on: ubuntu-latest
-    name: Configure and build using cmake
-    steps:
-      - uses: actions/checkout@v3
-      - uses: awalsh128/cache-apt-pkgs-action@latest
-        with:
-          packages: libhdf5-dev qtbase5-dev qt5-qmake libqt5svg5-dev
-          version: 1.0
-
-      - name: Configure CMake
-        # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make.
-        # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type
-        run: cmake -B ${{github.workspace}}/build -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} -DSLS_USE_TESTS=ON -DSLS_USE_HDF5=ON -DSLS_USE_GUI=ON -DSLS_USE_MOENCH=ON -DSLS_USE_PYTHON=ON
-
-      - name: Build
-        # Build your program with the given configuration
-        run: cmake --build ${{github.workspace}}/build -j2 --config ${{env.BUILD_TYPE}}
-
-      - name: Test
-        working-directory: ${{github.workspace}}/build
-        # Execute tests defined by the CMake configuration.
-        # See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail
-        run: ctest -C ${{env.BUILD_TYPE}} -j1
-
-

.gitignore

@@ -9,7 +9,7 @@ bin/
 *.o
 *.so
 .*
-build/
+build
 RELEASE.txt
 Testing/
 

.gitmodules

@@ -0,0 +1,3 @@
+[submodule "python/pybind11"]
+	path = libs/pybind11
+	url = https://github.com/pybind/pybind11.git

.travis.yml

@@ -31,7 +31,7 @@ script:
 
 deploy:
   provider: script
-  script: find $HOME/miniconda/envs/testenv/conda-bld/${TRAVIS_OS_NAME}-64 -name "*.tar.bz2" -exec anaconda -v --show-traceback -t $CONDA_TOKEN upload --force {} \;
+  script: find $HOME/miniconda/envs/testenv/conda-bld/${TRAVIS_OS_NAME}-64 -name "*.tar.bz2" -exec anaconda -t $CONDA_TOKEN upload --force {} \;
   on:
     branch: developer
     tags: true

CMakeFiles/cmake.check_cache

@@ -1 +0,0 @@
-# This file is generated by cmake for dependency checking of the CMakeCache.txt file

CMakeLists.txt

@@ -1,62 +1,13 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
-cmake_minimum_required(VERSION 3.14)
+cmake_minimum_required(VERSION 3.12)
 project(slsDetectorPackage)
-set(PROJECT_VERSION 7.0.0)
-
+set(PROJECT_VERSION 5.0.0)
+include(CheckIPOSupported)
 set(CMAKE_CXX_FLAGS_RELEASE "-O3 -DNDEBUG")
 
 cmake_policy(SET CMP0074 NEW)
-
-if (${CMAKE_VERSION} VERSION_GREATER "3.24")
-    cmake_policy(SET CMP0135 NEW) #Fetch content download timestamp
-endif()
 include(cmake/project_version.cmake)
-include(cmake/SlsAddFlag.cmake)
-
-
-
-# Using FetchContent to get libzmq
-include(FetchContent)
-option(SLS_FETCH_ZMQ_FROM_GITHUB "Fetch zmq from github" OFF)
-option(SLS_FETCH_PYBIND11_FROM_GITHUB "Fetch pybind11 from github" OFF)
-
-if(SLS_FETCH_ZMQ_FROM_GITHUB)
-    # Opt in to pull down a zmq version from github instead of
-    # using the bundled verison
-    FetchContent_Declare(
-        libzmq
-        GIT_REPOSITORY https://github.com/zeromq/libzmq.git
-        GIT_TAG        v4.3.4
-    )
-else()
-    # Standard behaviour use libzmq included in this repo (libs/libzmq)
-    FetchContent_Declare(
-        libzmq
-        URL ${CMAKE_CURRENT_SOURCE_DIR}/libs/libzmq/libzmq-4.3.4.tar.gz
-        URL_HASH MD5=cc20b769ac10afa352e5ed2769bb23b3
-    )
-endif()
-
-# Disable unwanted options from libzmq
-set(BUILD_TESTS OFF CACHE BOOL "Switch off libzmq test build")
-set(BUILD_SHARED OFF CACHE BOOL "Switch off libzmq shared libs")
-set(WITH_PERF_TOOL OFF CACHE BOOL "")
-set(ENABLE_CPACK OFF CACHE BOOL "")
-set(ENABLE_CLANG OFF CACHE BOOL "")
-set(ENABLE_CURVE OFF CACHE BOOL "")
-set(ENABLE_DRAFTS OFF CACHE BOOL "")
-
-# Using GetProperties and Populate to be able to exclude zmq
-# from install (not possible with FetchContent_MakeAvailable(libzmq))
-FetchContent_GetProperties(libzmq)
-if(NOT libzmq_POPULATED)
-  FetchContent_Populate(libzmq)
-  add_subdirectory(${libzmq_SOURCE_DIR} ${libzmq_BINARY_DIR} EXCLUDE_FROM_ALL)
-endif()
-
-
 
+# Include additional modules that are used unconditionally
 include(GNUInstallDirs)
 
 # If conda build, always set lib dir to 'lib'
@@ -70,7 +21,7 @@ string(TOLOWER "${PROJECT_NAME}" PROJECT_NAME_LOWER)
 
 # Set targets export name (used by slsDetectorPackage and dependencies)
 set(TARGETS_EXPORT_NAME "${PROJECT_NAME_LOWER}-targets")
-set(namespace "sls::")
+#set(namespace "${PROJECT_NAME}::")
 
 set(CMAKE_MODULE_PATH "${CMAKE_CURRENT_SOURCE_DIR}/cmake" ${CMAKE_MODULE_PATH})
 
@@ -81,80 +32,31 @@ if (CMAKE_CURRENT_SOURCE_DIR STREQUAL CMAKE_SOURCE_DIR)
     set(SLS_MASTER_PROJECT ON)
 endif()
 
-
-
-option(SLS_USE_HDF5 "HDF5 File format" OFF)
-option(SLS_BUILD_SHARED_LIBRARIES "Build shared libaries" ON)
-option(SLS_USE_TEXTCLIENT "Text Client" ON)
-option(SLS_USE_DETECTOR "Detector libs" ON)
-option(SLS_USE_RECEIVER "Receiver" ON)
-option(SLS_USE_RECEIVER_BINARIES "Receiver binaries" ON)
-option(SLS_USE_GUI "GUI" OFF)
-option(SLS_USE_SIMULATOR "Simulator" OFF)
-option(SLS_USE_TESTS "TESTS" OFF)
-option(SLS_USE_INTEGRATION_TESTS "Integration Tests" OFF)
+option (SLS_USE_HDF5 "HDF5 File format" OFF)
+option (SLS_USE_TEXTCLIENT "Text Client" ON)
+option (SLS_USE_RECEIVER "Receiver" ON)
+option (SLS_USE_GUI "GUI" OFF)
+option (SLS_USE_SIMULATOR "Simulator" OFF)
+option (SLS_USE_TESTS "TESTS" OFF)
+option (SLS_USE_INTEGRATION_TESTS "Integration Tests" OFF)
 option(SLS_USE_SANITIZER "Sanitizers for debugging" OFF)
 option(SLS_USE_PYTHON "Python bindings" OFF)
-option(SLS_INSTALL_PYTHONEXT "Install the python extension in the install tree under CMAKE_INSTALL_PREFIX/python/" OFF)
 option(SLS_USE_CTBGUI "ctb GUI" OFF)
 option(SLS_BUILD_DOCS "docs" OFF)
 option(SLS_BUILD_EXAMPLES "examples" OFF)
 option(SLS_TUNE_LOCAL "tune to local machine" OFF)
-option(SLS_DEVEL_HEADERS "install headers for devel" OFF)
-option(SLS_USE_MOENCH "compile zmq and post processing for Moench" OFF)
-option(SLS_USE_JUNGFRAU "compile post processing for Jungfrau" OFF)
-
-#Convenience option to switch off defaults when building Moench binaries only
-option(SLS_BUILD_ONLY_MOENCH "compile only Moench" OFF)
-if(SLS_BUILD_ONLY_MOENCH)
-    message(STATUS "Build MOENCH binaries only!")
-    set(SLS_BUILD_SHARED_LIBRARIES OFF CACHE BOOL "Disabled for MOENCH_ONLY" FORCE)
-    set(SLS_USE_TEXTCLIENT OFF CACHE BOOL "Disabled for MOENCH_ONLY" FORCE)
-    set(SLS_USE_DETECTOR OFF CACHE BOOL "Disabled for MOENCH_ONLY" FORCE)
-    set(SLS_USE_RECEIVER OFF CACHE BOOL "Disabled for MOENCH_ONLY" FORCE)
-    set(SLS_USE_RECEIVER_BINARIES OFF CACHE BOOL "Disabled for MOENCH_ONLY" FORCE)
-    set(SLS_USE_MOENCH ON CACHE BOOL "Enable" FORCE)
-endif()
-
-#Convenience option to switch off defaults when building Jungfrau binaries only
-option(SLS_BUILD_ONLY_JUNGFRAU "compile only Jungfrau" OFF)
-if(SLS_BUILD_ONLY_JUNGFRAU)
-    message(STATUS "Build JUNGFRAU binaries only!")
-    set(SLS_BUILD_SHARED_LIBRARIES OFF CACHE BOOL "Disabled for JUNGFRAU_ONLY" FORCE)
-    set(SLS_USE_TEXTCLIENT OFF CACHE BOOL "Disabled for JUNGFRAU_ONLY" FORCE)
-    set(SLS_USE_DETECTOR OFF CACHE BOOL "Disabled for JUNGFRAU_ONLY" FORCE)
-    set(SLS_USE_RECEIVER OFF CACHE BOOL "Disabled for JUNGFRAU_ONLY" FORCE)
-    set(SLS_USE_RECEIVER_BINARIES OFF CACHE BOOL "Disabled for JUNGFRAU_ONLY" FORCE)
-    set(SLS_USE_JUNGFRAU ON CACHE BOOL "Enable" FORCE)
-endif()
-
-
-option(SLS_EXT_BUILD "external build of part of the project" OFF)
-if(SLS_EXT_BUILD)
-    message(STATUS "External build using already installed libraries")
-    set(SLS_BUILD_SHARED_LIBRARIES OFF CACHE BOOL "Should already exist" FORCE)
-    set(SLS_USE_TEXTCLIENT OFF CACHE BOOL "Should already exist" FORCE)
-    set(SLS_USE_DETECTOR OFF CACHE BOOL "Should already exist" FORCE)
-    set(SLS_USE_RECEIVER OFF CACHE BOOL "Should already exist" FORCE)
-    set(SLS_USE_RECEIVER_BINARIES OFF CACHE BOOL "Should already exist" FORCE)
-    set(SLS_MASTER_PROJECT OFF CACHE BOOL "No master proj in case of extbuild" FORCE) 
-endif()
-
-#Maybe have an option guarding this?
-set(SLS_INTERNAL_RAPIDJSON_DIR ${CMAKE_CURRENT_SOURCE_DIR}/libs/rapidjson)
-
-set(SLS_INTERNAL_QWT_DIR ${CMAKE_CURRENT_SOURCE_DIR}/libs/qwt-6.1.5)
-
-set(ClangFormat_EXCLUDE_PATTERNS    "build/" 
-                                    "libs/" 
-                                    "slsDetectorCalibration/" 
-                                    "ctbGui/" 
-                                    "manual/"
-                                    "python/"
-                                    "sample/"
-                                    ${CMAKE_BINARY_DIR})
-find_package(ClangFormat)
 
+# Use ld.gold if it is available and isn't disabled explicitly
+option(SLS_USE_LD_GOLD "Use GNU gold linker" ON)
+if (SLS_USE_LD_GOLD)
+    execute_process(COMMAND ${CMAKE_C_COMPILER} -fuse-ld=gold -Wl,--version ERROR_QUIET OUTPUT_VARIABLE LD_VERSION)
+    if ("${LD_VERSION}" MATCHES "GNU gold")
+        set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -fuse-ld=gold")
+        set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fuse-ld=gold")
+    else ()
+        message(WARNING "GNU gold linker isn't available, using the default system linker.")
+    endif ()
+endif ()
 set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
 
 if (NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
@@ -163,77 +65,55 @@ if (NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
 endif()
 
 
-#Enable LTO if available
-include(CheckIPOSupported)
-check_ipo_supported(RESULT SLS_LTO_AVAILABLE)
-if((CMAKE_BUILD_TYPE STREQUAL "Release") AND SLS_LTO_AVAILABLE)
-    message(STATUS "Building with link time optimization")
-else()
-    message(STATUS "Building without link time optimization")
-endif()
+#Add two fake libraries to manage options
+add_library(slsProjectOptions INTERFACE)
+add_library(slsProjectWarnings INTERFACE)
+target_compile_features(slsProjectOptions INTERFACE cxx_std_11)
+target_compile_options(slsProjectWarnings INTERFACE 
+                                            -Wall
+                                            -Wextra
+                                            -Wno-unused-parameter #Needs to be slowly mitigated
+                                            # -Wold-style-cast
+                                            -Wnon-virtual-dtor
+                                            -Woverloaded-virtual
+                                            -Wdouble-promotion
+                                            -Wformat=2
+                                            -Wredundant-decls
+                                            # -Wconversion
+                                            -Wdouble-promotion
+                                            -Werror=return-type
+
+                                 )
 
 
-if(SLS_EXT_BUILD)
-    # Find ourself in case of external build
-    find_package(slsDetectorPackage ${PROJECT_VERSION} REQUIRED)
-endif()
-
-
-
-# slsProjectOptions and slsProjectWarnings are used
-# to control options for the libraries
-if(NOT TARGET slsProjectOptions)
-    add_library(slsProjectOptions INTERFACE)
-    target_compile_features(slsProjectOptions INTERFACE cxx_std_11)
-endif()
-
-if (NOT TARGET slsProjectWarnings)
-    add_library(slsProjectWarnings INTERFACE)
-    target_compile_options(slsProjectWarnings INTERFACE 
-        -Wall
-        -Wextra
-        -Wno-unused-parameter
-        # -Wold-style-cast
-        -Wnon-virtual-dtor
-        -Woverloaded-virtual
-        -Wdouble-promotion
-        -Wformat=2
-        -Wredundant-decls
-        # -Wconversion
-        -Wvla
-        -Wdouble-promotion
-        -Werror=return-type
-    )
-    # Add or disable warnings depending on if the compiler supports them 
-    # The function checks internally and sets HAS_warning-name
-    sls_enable_cxx_warning("-Wnull-dereference")
-    sls_enable_cxx_warning("-Wduplicated-cond")
-    sls_disable_cxx_warning("-Wclass-memaccess")
-
-    if (CMAKE_CXX_COMPILER_VERSION VERSION_LESS 5 AND "${CMAKE_CXX_COMPILER_ID}" STREQUAL "GNU")
-            target_compile_options(slsProjectWarnings INTERFACE 
-                                                -Wno-missing-field-initializers)
+#Testing for minimum version for compilers
+if ("${CMAKE_CXX_COMPILER_ID}" STREQUAL "Clang")
+    if (CMAKE_CXX_COMPILER_VERSION VERSION_LESS 3.2)
+        message(FATAL_ERROR "Clang version must be at least 3.2!")
+    endif()
+    target_compile_options(slsProjectWarnings INTERFACE -Wshadow) #Clag does not warn on constructor
+elseif ("${CMAKE_CXX_COMPILER_ID}" STREQUAL "GNU")
+    if (CMAKE_CXX_COMPILER_VERSION VERSION_LESS 4.8)
+            message(FATAL_ERROR "GCC version must be at least 4.8!")
     endif()
 
+    if (CMAKE_CXX_COMPILER_VERSION VERSION_LESS 5)
+            target_compile_options(slsProjectWarnings INTERFACE 
+                                             -Wno-missing-field-initializers)
+    endif()
     
-endif()
+    if (CMAKE_CXX_COMPILER_VERSION VERSION_GREATER 6.0)
+        target_compile_options(slsProjectWarnings INTERFACE 
+                                                -Wno-misleading-indentation # mostly in rapidjson remove using clang format
+                                                -Wduplicated-cond
+                                                -Wnull-dereference )
 
+    endif()
+    if (CMAKE_CXX_COMPILER_VERSION VERSION_GREATER 8.0)
+        target_compile_options(slsProjectWarnings INTERFACE 
+                                                -Wno-class-memaccess )
 
-if (NOT TARGET slsProjectCSettings)
-    #Settings for C code
-    add_library(slsProjectCSettings INTERFACE)
-    target_compile_options(slsProjectCSettings INTERFACE 
-                                                -std=gnu99 #fixed
-                                                -Wall
-                                                -Wextra
-                                                -Wno-unused-parameter
-                                                -Wdouble-promotion
-                                                -Wformat=2
-                                                -Wredundant-decls
-                                                -Wdouble-promotion
-                                                -Werror=return-type
-                                    )
-    sls_disable_c_warning("-Wstringop-truncation")
+    endif()
 endif()
 
 
@@ -244,46 +124,63 @@ if(SLS_USE_SANITIZER)
     # target_link_libraries(slsProjectOptions INTERFACE -fsanitize=thread)
 endif()
 
-
 if(SLS_TUNE_LOCAL)
     target_compile_options(slsProjectOptions INTERFACE -mtune=native -march=native)
 endif()
 
 
-if(SLS_MASTER_PROJECT)
-install(TARGETS slsProjectOptions slsProjectWarnings 
+#rapidjson
+add_library(rapidjson INTERFACE)
+target_include_directories(rapidjson INTERFACE
+    $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/libs/rapidjson>  
+)
+
+# Install fake the libraries
+install(TARGETS slsProjectOptions slsProjectWarnings rapidjson
     EXPORT "${TARGETS_EXPORT_NAME}"
     LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
     ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
     PUBLIC_HEADER DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}
 )
-endif()
 
 set(CMAKE_POSITION_INDEPENDENT_CODE ON)
 set(CMAKE_INSTALL_RPATH $ORIGIN)
+# set(CMAKE_BUILD_WITH_INSTALL_RPATH TRUE)
 set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
 
+
+
+find_package(ZeroMQ 4 REQUIRED)
+
 if (SLS_USE_TESTS)
     enable_testing()
     add_subdirectory(tests)
 endif(SLS_USE_TESTS)
 
 
-if(NOT SLS_EXT_BUILD)
-    add_subdirectory(slsSupportLib)
-endif()
 
-if (SLS_USE_DETECTOR OR SLS_USE_TEXTCLIENT)
+
+# Common functionallity to detector and receiver
+add_subdirectory(slsSupportLib)
+
+if (SLS_USE_TEXTCLIENT)
     add_subdirectory(slsDetectorSoftware)
-endif ()
+endif (SLS_USE_TEXTCLIENT)
+
 
 if (SLS_USE_RECEIVER)
+    if (SLS_USE_HDF5)
+        find_package(HDF5 1.10 COMPONENTS CXX REQUIRED)
+    endif (SLS_USE_HDF5)
     add_subdirectory(slsReceiverSoftware) 
 endif (SLS_USE_RECEIVER)
 
 if (SLS_USE_GUI)   
-    add_subdirectory(libs/qwt)  
-    add_subdirectory(slsDetectorGui)
+    find_package(Qt4 REQUIRED)
+    find_package(Qwt 6.1 REQUIRED)
+    if (QT4_FOUND AND QWT_FOUND)
+        add_subdirectory(slsDetectorGui)
+    endif()
 endif (SLS_USE_GUI)
 
 if (SLS_USE_SIMULATOR)
@@ -295,23 +192,8 @@ if (SLS_USE_INTEGRATION_TESTS)
 endif (SLS_USE_INTEGRATION_TESTS)
 
 if (SLS_USE_PYTHON)
-    find_package (Python 3.6 COMPONENTS Interpreter Development)
-    if(SLS_FETCH_PYBIND11_FROM_GITHUB)
-        FetchContent_Declare(
-            pybind11
-            GIT_REPOSITORY https://github.com/pybind/pybind11
-            GIT_TAG        v2.11.0
-        )
-
-    else()
-        FetchContent_Declare(
-            pybind11
-            URL ${CMAKE_SOURCE_DIR}/libs/pybind11/v2.11.0.tar.gz
-            URL_HASH MD5=90c4946e87c64d8d8fc0ae4edf35d780
-        )
-    endif()
-    FetchContent_MakeAvailable(pybind11)
-
+    set(PYBIND11_CPP_STANDARD -std=c++11)
+    add_subdirectory(libs/pybind11)
     add_subdirectory(python)
 endif(SLS_USE_PYTHON)
 
@@ -331,18 +213,11 @@ if(SLS_BUILD_DOCS)
     add_subdirectory(docs)
 endif(SLS_BUILD_DOCS)
 
-if(SLS_USE_MOENCH)
-    add_subdirectory(slsDetectorCalibration/tiffio)
-    add_subdirectory(slsDetectorCalibration/moenchExecutables)
-endif(SLS_USE_MOENCH)
-
-if(SLS_USE_JUNGFRAU)
-    add_subdirectory(slsDetectorCalibration/tiffio)
-    add_subdirectory(slsDetectorCalibration/jungfrauExecutables)
-endif(SLS_USE_JUNGFRAU)
-
 if(SLS_MASTER_PROJECT)
+    # Set install dir CMake packages
     set(CMAKE_INSTALL_DIR "share/cmake/${PROJECT_NAME}")
-    set(PROJECT_LIBRARIES slsSupportShared slsDetectorShared slsReceiverShared)
+    # Set the list of exported targets
+    set(PROJECT_LIBRARIES slsSupportLib slsDetectorShared slsReceiverShared)
+    # Generate and install package config file and version
     include(cmake/package_config.cmake)
 endif()

COPYING

@@ -1,17 +0,0 @@
-The SLS Detector Package is provided under:
-
-	SPDX-License-Identifier: LGPL-3.0-or-later
-
-Being under the terms of the GNU Lesser General Public License version 3 or later, 
-according with:
-
-	LICENSES/LGPL-3.0
-
-Source code under the Apache 2.0 License have the SPDX Identifier and are 
-according with:
-
-	LICENSES/ThirdParty/Apache-2.0
-
-All contributions to the SLS Detector Package are subject to this COPYING file.
-
-

LICENSES/GPL-3.0

@@ -1,688 +0,0 @@
-Valid-License-Identifier: GPL-3.0
-Valid-License-Identifier: GPL-3.0+
-SPDX-URL: https://spdx.org/licenses/GPL-3.0-or-later.html
-Usage-Guide:
-  To use this license in source code, put one of the following SPDX
-  tag/value pairs into a comment according to the placement
-  guidelines in the licensing rules documentation.
-  For 'GNU Library General Public License (LGPL) version 3.0 only' use:
-    SPDX-License-Identifier: GPL-3.0
-  For 'GNU Library General Public License (LGPL) version 3.0 or any later
-  version' use:
-    SPDX-License-Identifier: GPL-3.0-or-later
-License-Text:
-
-                    GNU GENERAL PUBLIC LICENSE
-                       Version 3, 29 June 2007
-
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LICENSES/LGPL-3.0

@@ -1,179 +0,0 @@
-Valid-License-Identifier: LGPL-3.0
-Valid-License-Identifier: LGPL-3.0+
-SPDX-URL: https://spdx.org/licenses/LGPL-3.0-or-later.html
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README.md

@@ -1,233 +1,68 @@
-## Dependencies
-Before building from source make sure that you have the [software wiki](https://slsdetectorgroup.github.io/devdoc/dependencies.html) installed. If installing using conda, conda will manage the dependencies. Avoid also installing packages with pip. 
-
-## Documentaion
-Detailed documentation can be found in the [software wiki](https://slsdetectorgroup.github.io/devdoc/index.html) and on the [official site](https://www.psi.ch/en/detectors/software).
-
-## Installation
-
-### 1. Install binaries using conda
-Conda is not only useful to manage python environments but can also
-be used as a user space package manager. Dates in the tag (for eg. 2020.07.23.dev0) 
-are from the developer branch. Please use released tags for stability.
-
-We have three different packages available:
-* **slsdetlib** shared libraries and command line utilities 
-* **slsdetgui** GUI
-* **slsdet** Python bindings
+### Documentation
+Detailed documentation can be found on the [official site.](https://www.psi.ch/detectors/users-support)
 
+### Binaries
+Binaries for the slsDetectorPackage are available through conda. 
 ```
-#Add channels for dependencies and our library
+#Add conda channels
 conda config --add channels conda-forge
 conda config --add channels slsdetectorgroup
-conda config --set channel_priority strict
 
-#create and activate an environment with our library
-#replace 6.1.1 with the required tag
-conda create -n myenv slsdetlib=6.1.1
-conda activate myenv
+conda install slsdetlib   #only shared lib and command line
+conda install slsdet      #python bindings (includes slsdetlib)
+conda install slsdetgui   #gui (includes qt4)
 
-#ready to use
-sls_detector_get exptime
-etc ...
-```
+#Install specific version
+conda install slsdet=2020.03.02.dev0 #developer version from 3 March 2020
 
 ```
-# List available versions
-# lib and binaries
-conda search slsdetlib
-# python
-conda search slsdet
-# gui
-conda search slsdetgui
+
+### Source code
+One can also obtain the source code from this repository and compile.
 ```
-
-### 2. Build from source
-
-##### 2.1 Download Source Code from github
-```
-git clone https://github.com/slsdetectorgroup/slsDetectorPackage.git --branch 7.0.0
-```
-
-**Pybind for Python**<br>
-* **v7.0.0+**:
-pybind11 packaged into 'libs/pybind'. No longer a submodule. No need for "recursive" or "submodule update".
- 
-* **Older versions**:
-   pybind11 is a submodule. Must be cloned using "recursive" and updated when switching between versions using the following commands.
+git clone https://github.com/slsdetectorgroup/slsDetectorPackage.git
 
 ```
-# clone using recursive to get pybind11 submodule
-git clone --recursive https://github.com/slsdetectorgroup/slsDetectorPackage.git
+#### Dependencies 
+* Lib: c++11 compiler (gcc=>4.8), ZeroMQ 4
+* Gui: Qt 4.8 and Qwt 6.0
+* Calibration wizards and ctbGUI: ROOT
+* Optional: HDF5
 
-# update submodule when switching between releases
-cd slsDetectorPackage
-git submodule update --init
+
+#### Compilation 
+
+Compiling can be done in two ways. Either with the convenience script
+cmk.sh or directly with cmake for more control.
+
+**1. Compile using script cmk.sh**<br>
+
+After compiling, the libraries and executables will be found in `slsDetectorPackage/build/bin` directory<br>
+
+Usage: [-c] [-b] [-p] [e] [t] [r] [g] [s] [u] [i] [-h] [-d <HDF5 directory>] [-j] <Number of threads>
+ -[no option]: only make
+ -c: Clean
+ -b: Builds/Rebuilds CMake files normal mode
+ -p: Builds/Rebuilds Python API
+ -h: Builds/Rebuilds Cmake files with HDF5 package
+ -d: HDF5 Custom Directory
+ -t: Build/Rebuilds only text client
+ -r: Build/Rebuilds only receiver
+ -g: Build/Rebuilds only gui
+ -s: Simulator
+ -u: Chip Test Gui
+ -j: Number of threads to compile through
+ -e: Debug mode
+ -i: Builds tests
+  
+eg. Rebuild when you switch to a new build and compile in parallel:
+./cmk.sh -bj5
+
+**2. Compile without script**<br>
+Use cmake to create out-of-source builds, by creating a build folder parallel to source directory. This would create a debug build with address sanitizers.
 ```
-
-##### 2.2 Build from source
-
-
-###### Build using CMake
-
+    $ mkdir build
+    $ cd build
+    $ cmake ../slsDetectorPackage  -DCMAKE_BUILD_TYPE=Debug -DSLS_USE_SANITIZER=ON
+    $ make -j12 #or whatever number of threads wanted
 ```
-# outside slsDetecorPackage folder
-mkdir build && cd build
-
-# configure & generate Makefiles using cmake
-# by listing all your options (alternately use ccmake described below)
-# cmake3 for some systems
-cmake ../slsDetectorPackage -DCMAKE_INSTALL_PREFIX=/your/install/path
-
-# compiled to the build/bin directory
-make -j12 #or whatever number of cores you are using to build
-
-# install headers and libs in /your/install/path directory
-make install
-```
-
-Instead of the cmake command, one can use ccmake to get a list of options to configure and generate Makefiles at ease.
-
-
-```
-# ccmake3 for some systems
-ccmake ..
- 
-# choose the options
-# first press [c] - configure
-# then press [g] - generate
-```
-
-|Example cmake options|Comment|
-|---|---|
-| -DSLS_USE_PYTHON=ON            | Python                                 |   
-| -DPython_FIND_VIRTUALENV=ONLY  | Python from only the conda environment |
-| -DZeroMQ_HINT=/usr/lib64       | Use system zmq instead                 |    
-| -DSLS_USE_GUI=ON               | GUI                                    |
-
-
-###### Build using in-built cmk.sh script
-
-```
-The binaries are generated in slsDetectorPackage/build/bin directory.
-
-Usage: ./cmk.sh [-b] [-c] [-d <HDF5 directory>] [e] [g] [-h] [i] [-j <Number of threads>] 
-[-k <CMake command>] [-l <Install directory>] [m] [n] [-p] [-q <Zmq hint directory>] 
-[r] [s] [t] [u] [z]  
--[no option]: only make
--b: Builds/Rebuilds CMake files normal mode
--c: Clean
--d: HDF5 Custom Directory
--e: Debug mode
--g: Build/Rebuilds gui
--h: Builds/Rebuilds Cmake files with HDF5 package
--i: Builds tests
--j: Number of threads to compile through
--k: CMake command
--l: Install directory
--m: Manuals
--n: Manuals without compiling doxygen (only rst)
--p: Builds/Rebuilds Python API
--q: Zmq hint directory
--r: Build/Rebuilds only receiver
--s: Simulator
--t: Build/Rebuilds only text client
--u: Chip Test Gui
--z: Moench zmq processor
-
-    
-# display all options
-./cmk.sh -?
-
-# new build and compile in parallel (recommended basic option):
-./cmk.sh -cbj5
-
-# new build, python and compile in parallel:
-./cmk.sh -cbpj5
-
-#To use the system zmq (/usr/lib64) instead
-./cmk.sh -cbj5 -q /usr/lib64
-```
-
-###### Build on old distributions
-
-If your linux distribution doesn't come with a C++11 compiler (gcc>4.8) then 
-it's possible to install a newer gcc using conda and build the slsDetectorPackage
-using this compiler
-
-```
-#Create an environment with the dependencies
-conda create -n myenv gxx_linux-64 cmake zmq
-conda activate myenv
-
-# outside slsDetecorPackage folder
-mkdir build && cd build
-cmake ../slsDetectorPackage -DCMAKE_PREFIX_PATH=$CONDA_PREFIX
-make -j12
-```
-
-###### Build slsDetectorGui (Qt5)
-
-1. Using pre-built binary on conda
-```
-conda create -n myenv slsdetgui=7.0.0
-conda activate myenv
-```
-
-2. Using system installation on RHEL7
-```
-yum install qt5-qtbase-devel.x86_64
-yum install qt5-qtsvg-devel.x86_64 
-```
-
-3. Using conda
-```
-#Add channels for dependencies and our library
-conda config --add channels conda-forge
-conda config --add channels slsdetectorgroup
-conda config --set channel_priority strict
-
-# create environment to compile
-# on rhel7
-conda create -n slsgui zeromq gxx_linux-64 gxx_linux-64 mesa-libgl-devel-cos6-x86_64 qt
-# on fedora or newer systems
-conda create -n slsgui zeromq qt
-
-# when using conda compilers, would also need libgl, but no need for it on fedora unless maybe using it with ROOT
-
-# activate environment
-conda activate slsgui
-
-# compile with cmake outside slsDetecorPackage folder
-mkdir build && cd build
-cmake ../slsDetectorPackage -DSLS_USE_GUI=ON
-make -j12
-
-# or compile with cmk.sh
-cd slsDetectorPackage
-./cmk.sh -cbgj9
-```
-
-###### Build documentation from package
-The documentation for the slsDetectorPackage is build using a combination 
-of Doxygen, Sphinx and Breathe. The easiest way to install the dependencies
-is to use conda 
-
-```
-conda create -n myenv python sphinx_rtd_theme breathe
-```
-
-```
-# using cmake or ccmake to enable DSLS_BUILD_DOCS
-# outside slsDetecorPackage folder
-mkdir build && cd build
-cmake ../slsDetectorPackage -DSLS_BUILD_DOCS=ON
-
-make docs # generate API docs and build Sphinx RST
-make rst # rst only, saves time in case the API did not change
-```
-
-
-## Support
-    dhanya.thattil@psi.ch
-    erik.frojdh@psi.ch

RELEASE.txt

@@ -1,215 +1,2 @@
-SLS Detector Package Major Release 7.x.x released on xx.xx.2023
-===============================================================
-
-This document describes the differences between v7.x.x and v7.0.2   
-
-
-
-    CONTENTS
-    --------
-    1           New, Changed or Resolved Features
-        1.1     Compilation
-        1.2     Callback
-        1.3     Python
-        1.4     Client
-        1.5     Detector Server
-        1.6     Simulator
-        1.7     Receiver
-        1.8     Gui
-    2           On-board Detector Server Compatibility
-    3           Firmware Requirements
-    4           Kernel Requirements
-    5           Download, Documentation & Support
-
-
-
-
-1 New, Changed or Resolved Features
-=====================================
-
-
-- moench being made compatible with jungfrau 2.0 boards (jungfrau structure, away from ctb)
-- eiger febl and feb in versions
-- fix ctb slow adcs
-
-
-
-2  On-board Detector Server Compatibility
-==========================================
-
-
-    Eiger       7.0.0
-    Jungfrau    7.0.2
-    Mythen3     7.0.0
-    Gotthard2   7.0.0
-    Gotthard    7.0.0
-    Moench      7.0.0
-    Ctb         7.0.0
-    
-
-    On-board Detector Server Upgrade
-    --------------------------------
-
-    From v6.1.0 (without tftp):
-        Using command 'updatedetectorserver'
-    From 5.0.0 (with tftp):
-        Using command 'copydetectorserver'
-
-    Instructions available at
-        https://slsdetectorgroup.github.io/devdoc/serverupgrade.html
-
-
-
-
-3 Firmware Requirements
-========================
-
-
-    Eiger       20.02.2023 (v31)
-    
-    Jungfrau    04.11.2022 (v1.4, HW v1.0) 
-                03.11.2022 (v2.4, HW v2.0)
-
-    Mythen3     24.01.2023 (v1.4)
-
-    Gotthard2   23.11.2022 (v0.3)
-
-    Gotthard    08.02.2018 (50um and 25um Master)
-                09.02.2018 (25 um Slave) 
-
-    Moench      05.12.2022 (v0.3)
-
-    Ctb         03.04.2023 (v1.2?)
-
-
-    Detector Upgrade
-    ----------------
-
-    The following can be upgraded remotely:
-
-    Eiger      via bit files
-    Jungfrau   via command <.pof>
-    Mythen3    via command <.rbf>
-    Gotthard2  via command <.rbf>
-    Moench     via command <.pof>
-    Ctb        via command <.pof>
-
-    Gotthard cannot be upgraded remotely  
-
-    Except Eiger, 
-        upgrade 
-            Using command 'programfpga' or
-
-        udpate both server and firmware simultaneously
-            Using command 'update'
-
-
-    Instructions available at
-        https://slsdetectorgroup.github.io/devdoc/firmware.html
-
-
-
-
-4 Kernel Requirements
-======================
-
-    Blackfin 
-    --------
-    Latest version: Fri Oct 29 00:00:00 2021
-    
-    Older ones will work, but might have issues with programming firmware via
-    the package.
-
-    Nios
-    -----
-    Compatible version: Mon May 10 18:00:21 CEST 2021
-
-    Kernel Upgrade
-    ---------------
-    Eiger   via bit files
-    Others  via command
-
-    Commands: udpatekernel, kernelversion
-    Instructions available at
-        https://slsdetectorgroup.github.io/devdoc/commandline.html
-        https://slsdetectorgroup.github.io/devdoc/detector.html
-        https://slsdetectorgroup.github.io/devdoc/pydetector.html
-
-
-
-
-5 Download, Documentation & Support
-====================================
-
-    Download
-    --------
-    
-    The Source Code:
-         https://github.com/slsdetectorgroup/slsDetectorPackage
-            
-    Documentation
-    -------------
-    
-    Installation:
-        https://slsdetectorgroup.github.io/devdoc/installation.html
-
-    Quick Start Guide:
-        https://slsdetectorgroup.github.io/devdoc/quick_start_guide.html
-        
-    Firmware Upgrade:
-        https://slsdetectorgroup.github.io/devdoc/firmware.html
-
-    Detector Server upgrade:
-        https://slsdetectorgroup.github.io/devdoc/serverupgrade.html
-
-    Detector Simulators:
-        https://slsdetectorgroup.github.io/devdoc/virtualserver.html
-
-    Consuming slsDetectorPackage:
-        https://slsdetectorgroup.github.io/devdoc/consuming.html
-        
-    API Examples:
-        https://github.com/slsdetectorgroup/api-examples
-
-    Command Line Documentation:
-        https://slsdetectorgroup.github.io/devdoc/commandline.html
-
-    C++ API Documentation:
-        https://slsdetectorgroup.github.io/devdoc/detector.html
-       
-    C++ API Example:
-        https://slsdetectorgroup.github.io/devdoc/examples.html#
-        
-    Python API Documentation:
-        https://slsdetectorgroup.github.io/devdoc/pygettingstarted.html
-
-    Python API Example:
-        https://slsdetectorgroup.github.io/devdoc/pyexamples.html
-
-    Receivers (including custom receiver):
-        https://slsdetectorgroup.github.io/devdoc/receivers.html
-        https://slsdetectorgroup.github.io/devdoc/slsreceiver.html
-
-    Detector UDP Header:
-        https://slsdetectorgroup.github.io/devdoc/udpheader.html
-        https://slsdetectorgroup.github.io/devdoc/udpdetspec.html
-
-    slsReceiver Zmq Format:
-        https://slsdetectorgroup.github.io/devdoc/slsreceiver.html#zmq-json-header-format
-
-    TroubleShooting:
-        https://slsdetectorgroup.github.io/devdoc/troubleshooting.html
-        https://slsdetectorgroup.github.io/devdoc/troubleshooting.html#receiver-pc-tuning-options
-        
-    Further Documentation:
-        https://www.psi.ch/en/detectors/documentation
-        
-    Info on Releases:
-        https://www.psi.ch/en/detectors/software
-
-
-    Support
-    -------
-
-        dhanya.thattil@psi.ch
-        erik.frojdh@psi.ch
+Draft
+- dr 4, 8, 16 in eiger -> speed 0, 32 stays same (speed 1)

bash_autocomplete.sh

@@ -1 +0,0 @@
-slsDetectorSoftware/generator/autocomplete/bash_autocomplete.sh

cmake/FindClangFormat.cmake

@@ -1,39 +0,0 @@
-# Find Clang format
-if(NOT ClangFormat_BIN_NAME)
-	set(ClangFormat_BIN_NAME clang-format)
-endif()
-
-# if custom path check there first
-if(ClangFormat_ROOT_DIR)
-    find_program(ClangFormat_BIN 
-        NAMES
-        ${ClangFormat_BIN_NAME}
-        PATHS
-        "${ClangFormat_ROOT_DIR}"
-        NO_DEFAULT_PATH)
-endif()
-
-find_program(ClangFormat_BIN NAMES ${ClangFormat_BIN_NAME})
-
-include(FindPackageHandleStandardArgs)
-FIND_PACKAGE_HANDLE_STANDARD_ARGS(
-    ClangFormat
-    DEFAULT_MSG 
-    ClangFormat_BIN)
-
-mark_as_advanced(
-    ClangFormat_BIN)
-
-if(ClangFormat_FOUND)
-    exec_program(${ClangFormat_BIN} ${CMAKE_CURRENT_SOURCE_DIR} ARGS --version OUTPUT_VARIABLE CLANG_VERSION_TEXT)
-    string(REGEX MATCH "([0-9]+)\\.[0-9]+\\.[0-9]+" CLANG_VERSION ${CLANG_VERSION_TEXT})
-    if((${CLANG_VERSION} GREATER "9") OR (${CLANG_VERSION} EQUAL "9"))
-        # A CMake script to find all source files and setup clang-format targets for them
-        message(STATUS "found clang-format \"${CLANG_VERSION}\" adding formatting targets")
-        include(clang-format)
-    else()
-        message(STATUS "clang-format version \"${CLANG_VERSION}\" found but need at least 9. Not setting up format targets")
-    endif()
-else()
-    message(STATUS "clang-format not found. Not setting up format targets")
-endif()

cmake/FindQwt.cmake

@@ -0,0 +1,118 @@
+# Qt Widgets for Technical Applications
+# available at http://www.http://qwt.sourceforge.net/
+#
+# The module defines the following variables:
+#  QWT_FOUND - the system has Qwt
+#  QWT_INCLUDE_DIR - where to find qwt_plot.h
+#  QWT_INCLUDE_DIRS - qwt includes
+#  QWT_LIBRARY - where to find the Qwt library
+#  QWT_LIBRARIES - aditional libraries
+#  QWT_MAJOR_VERSION - major version
+#  QWT_MINOR_VERSION - minor version
+#  QWT_PATCH_VERSION - patch version
+#  QWT_VERSION_STRING - version (ex. 5.2.1)
+#  QWT_ROOT_DIR - root dir (ex. /usr/local)
+
+#=============================================================================
+# Copyright 2010-2013, Julien Schueller
+# All rights reserved.
+# 
+# Redistribution and use in source and binary forms, with or without
+# modification, are permitted provided that the following conditions are met: 
+# 
+# 1. Redistributions of source code must retain the above copyright notice, this
+#    list of conditions and the following disclaimer. 
+# 2. Redistributions in binary form must reproduce the above copyright notice,
+#    this list of conditions and the following disclaimer in the documentation
+#    and/or other materials provided with the distribution. 
+#
+# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
+# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+# DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
+# ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+# LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
+# ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+# The views and conclusions contained in the software and documentation are those
+# of the authors and should not be interpreted as representing official policies, 
+# either expressed or implied, of the FreeBSD Project.
+#=============================================================================
+
+
+find_path ( QWT_INCLUDE_DIR
+  NAMES qwt_plot.h
+  HINTS $ENV{QWTDIR} $ENV{QWTDIR}/src ${QT_INCLUDE_DIR}
+  PATH_SUFFIXES qwt qwt-qt3 qwt-qt4 qwt-qt5
+)
+
+set ( QWT_INCLUDE_DIRS ${QWT_INCLUDE_DIR} )
+
+# version
+set ( _VERSION_FILE ${QWT_INCLUDE_DIR}/qwt_global.h )
+if ( EXISTS ${_VERSION_FILE} )
+  file ( STRINGS ${_VERSION_FILE} _VERSION_LINE REGEX "define[ ]+QWT_VERSION_STR" )
+  if ( _VERSION_LINE )
+    string ( REGEX REPLACE ".*define[ ]+QWT_VERSION_STR[ ]+\"(.*)\".*" "\\1" QWT_VERSION_STRING "${_VERSION_LINE}" )
+    string ( REGEX REPLACE "([0-9]+)\\.([0-9]+)\\.([0-9]+)" "\\1" QWT_MAJOR_VERSION "${QWT_VERSION_STRING}" )
+    string ( REGEX REPLACE "([0-9]+)\\.([0-9]+)\\.([0-9]+)" "\\2" QWT_MINOR_VERSION "${QWT_VERSION_STRING}" )
+    string ( REGEX REPLACE "([0-9]+)\\.([0-9]+)\\.([0-9]+)" "\\3" QWT_PATCH_VERSION "${QWT_VERSION_STRING}" )
+  endif ()
+endif ()
+
+
+# check version
+set ( _QWT_VERSION_MATCH TRUE )
+if ( Qwt_FIND_VERSION AND QWT_VERSION_STRING )
+  if ( Qwt_FIND_VERSION_EXACT )
+    if ( NOT Qwt_FIND_VERSION VERSION_EQUAL QWT_VERSION_STRING )
+      set ( _QWT_VERSION_MATCH FALSE )
+    endif ()
+  else ()
+    if ( QWT_VERSION_STRING VERSION_LESS Qwt_FIND_VERSION )
+      set ( _QWT_VERSION_MATCH FALSE )
+    endif ()
+  endif ()
+endif ()
+
+
+find_library ( QWT_LIBRARY
+  NAMES qwt qwt-qt3 qwt-qt4 qwt-qt5
+  HINTS $ENV{QWTDIR}/lib ${QT_LIBRARY_DIR}
+)
+
+set ( QWT_LIBRARIES ${QWT_LIBRARY} )
+
+
+# try to guess root dir from include dir
+if ( QWT_INCLUDE_DIR )
+  string ( REGEX REPLACE "(.*)/include.*" "\\1" QWT_ROOT_DIR ${QWT_INCLUDE_DIR} )
+# try to guess root dir from library dir
+elseif ( QWT_LIBRARY )
+  string ( REGEX REPLACE "(.*)/lib[/|32|64].*" "\\1" QWT_ROOT_DIR ${QWT_LIBRARY} )
+endif ()
+
+
+# handle the QUIETLY and REQUIRED arguments
+include ( FindPackageHandleStandardArgs )
+if ( CMAKE_VERSION LESS 2.8.3 )
+  find_package_handle_standard_args( Qwt DEFAULT_MSG QWT_LIBRARY QWT_INCLUDE_DIR _QWT_VERSION_MATCH )
+else ()
+  find_package_handle_standard_args( Qwt REQUIRED_VARS QWT_LIBRARY QWT_INCLUDE_DIR _QWT_VERSION_MATCH VERSION_VAR QWT_VERSION_STRING )
+endif ()
+
+
+mark_as_advanced (
+  QWT_LIBRARY 
+  QWT_LIBRARIES
+  QWT_INCLUDE_DIR
+  QWT_INCLUDE_DIRS
+  QWT_MAJOR_VERSION
+  QWT_MINOR_VERSION
+  QWT_PATCH_VERSION
+  QWT_VERSION_STRING
+  QWT_ROOT_DIR
+)

cmake/FindSphinx.cmake

@@ -1,6 +1,6 @@
 #Look for an executable called sphinx-build
 find_program(SPHINX_EXECUTABLE
-             NAMES sphinx-build sphinx-build-3.6
+             NAMES sphinx-build
              DOC "Path to sphinx-build executable")
  
 include(FindPackageHandleStandardArgs)

cmake/FindZeroMQ.cmake

@@ -0,0 +1,112 @@
+
+# This file is originally from https://github.com/zeromq/azmq and distributed 
+# under Boost Software Lincese 1.0
+# Boost Software License - Version 1.0 - August 17th, 2003
+
+# Permission is hereby granted, free of charge, to any person or organization
+# obtaining a copy of the software and accompanying documentation covered by
+# this license (the "Software") to use, reproduce, display, distribute,
+# execute, and transmit the Software, and to prepare derivative works of the
+# Software, and to permit third-parties to whom the Software is furnished to
+# do so, all subject to the following:
+
+# The copyright notices in the Software and this entire statement, including
+# the above license grant, this restriction and the following disclaimer,
+# must be included in all copies of the Software, in whole or in part, and
+# all derivative works of the Software, unless such copies or derivative
+# works are solely in the form of machine-executable object code generated by
+# a source language processor.
+
+# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+# FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
+# SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
+# FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
+# ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
+# DEALINGS IN THE SOFTWARE.
+# --------------------------------------------------------------------------------
+
+# Find ZeroMQ Headers/Libs
+
+# Variables
+# ZMQ_ROOT - set this to a location where ZeroMQ may be found
+#
+# ZeroMQ_FOUND - True of ZeroMQ found
+# ZeroMQ_INCLUDE_DIRS - Location of ZeroMQ includes
+# ZeroMQ_LIBRARIES - ZeroMQ libraries
+
+include(FindPackageHandleStandardArgs)
+
+if (NOT ZMQ_ROOT)
+    set(ZMQ_ROOT "$ENV{ZMQ_ROOT}")
+endif()
+
+if (NOT ZMQ_ROOT)
+    find_path(_ZeroMQ_ROOT NAMES include/zmq.h)
+else()
+    set(_ZeroMQ_ROOT "${ZMQ_ROOT}")
+endif()
+
+find_path(ZeroMQ_INCLUDE_DIRS NAMES zmq.h HINTS ${_ZeroMQ_ROOT}/include)
+
+if (ZeroMQ_INCLUDE_DIRS)
+    set(_ZeroMQ_H ${ZeroMQ_INCLUDE_DIRS}/zmq.h)
+
+    function(_zmqver_EXTRACT _ZeroMQ_VER_COMPONENT _ZeroMQ_VER_OUTPUT)
+        set(CMAKE_MATCH_1 "0")
+        set(_ZeroMQ_expr "^[ \\t]*#define[ \\t]+${_ZeroMQ_VER_COMPONENT}[ \\t]+([0-9]+)$")
+        file(STRINGS "${_ZeroMQ_H}" _ZeroMQ_ver REGEX "${_ZeroMQ_expr}")
+        string(REGEX MATCH "${_ZeroMQ_expr}" ZeroMQ_ver "${_ZeroMQ_ver}")
+        set(${_ZeroMQ_VER_OUTPUT} "${CMAKE_MATCH_1}" PARENT_SCOPE)
+    endfunction()
+
+    _zmqver_EXTRACT("ZMQ_VERSION_MAJOR" ZeroMQ_VERSION_MAJOR)
+    _zmqver_EXTRACT("ZMQ_VERSION_MINOR" ZeroMQ_VERSION_MINOR)
+    _zmqver_EXTRACT("ZMQ_VERSION_PATCH" ZeroMQ_VERSION_PATCH)
+
+    message(STATUS "ZeroMQ version: ${ZeroMQ_VERSION_MAJOR}.${ZeroMQ_VERSION_MINOR}.${ZeroMQ_VERSION_PATCH}")
+
+    # We should provide version to find_package_handle_standard_args in the same format as it was requested,
+    # otherwise it can't check whether version matches exactly.
+    if (ZeroMQ_FIND_VERSION_COUNT GREATER 2)
+        set(ZeroMQ_VERSION "${ZeroMQ_VERSION_MAJOR}.${ZeroMQ_VERSION_MINOR}.${ZeroMQ_VERSION_PATCH}")
+    else()
+        # User has requested ZeroMQ version without patch part => user is not interested in specific patch =>
+        # any patch should be an exact match.
+        set(ZeroMQ_VERSION "${ZeroMQ_VERSION_MAJOR}.${ZeroMQ_VERSION_MINOR}")
+    endif()
+
+    if (NOT ${CMAKE_CXX_PLATFORM_ID} STREQUAL "Windows")
+        find_library(ZeroMQ_LIBRARIES NAMES zmq HINTS ${_ZeroMQ_ROOT}/lib)
+    else()
+        find_library(
+            ZeroMQ_LIBRARY_RELEASE
+            NAMES
+                libzmq
+                "libzmq-${CMAKE_VS_PLATFORM_TOOLSET}-mt-${ZeroMQ_VERSION_MAJOR}_${ZeroMQ_VERSION_MINOR}_${ZeroMQ_VERSION_PATCH}"
+            HINTS
+                ${_ZeroMQ_ROOT}/lib
+            )
+
+        find_library(
+            ZeroMQ_LIBRARY_DEBUG
+            NAMES
+                libzmq_d
+                "libzmq-${CMAKE_VS_PLATFORM_TOOLSET}-mt-gd-${ZeroMQ_VERSION_MAJOR}_${ZeroMQ_VERSION_MINOR}_${ZeroMQ_VERSION_PATCH}"
+            HINTS
+                ${_ZeroMQ_ROOT}/lib)
+
+        # On Windows we have to use corresponding version (i.e. Release or Debug) of ZeroMQ because of `errno` CRT global variable
+        # See more at http://www.drdobbs.com/avoiding-the-visual-c-runtime-library/184416623
+        set(ZeroMQ_LIBRARIES optimized "${ZeroMQ_LIBRARY_RELEASE}" debug "${ZeroMQ_LIBRARY_DEBUG}")
+    endif()
+endif()
+
+find_package_handle_standard_args(ZeroMQ FOUND_VAR ZeroMQ_FOUND
+    REQUIRED_VARS ZeroMQ_INCLUDE_DIRS ZeroMQ_LIBRARIES
+    VERSION_VAR ZeroMQ_VERSION)
+
+if (ZeroMQ_FOUND)
+    mark_as_advanced(ZeroMQ_INCLUDE_DIRS ZeroMQ_LIBRARIES ZeroMQ_VERSION
+        ZeroMQ_VERSION_MAJOR ZeroMQ_VERSION_MINOR ZeroMQ_VERSION_PATCH)
+endif()

cmake/SlsAddFlag.cmake

@@ -1,64 +0,0 @@
-include(CheckCXXCompilerFlag)
-include(CheckCCompilerFlag)
-
-
-function(enable_cxx_warning flag target)
-    string(REPLACE "-W" "HAS_" flag_name ${flag})
-    check_cxx_compiler_flag(${flag} ${flag_name})
-    if(${flag_name})
-        target_compile_options(${target} INTERFACE ${flag})
-        message(STATUS "Adding: ${flag} to ${target}")
-    else()
-        message(STATUS "Flag: ${flag} not supported")
-    endif()
-endfunction()
-
-function(enable_c_warning flag target)
-    string(REPLACE "-W" "HAS_" flag_name ${flag})
-    check_c_compiler_flag(${flag} ${flag_name})
-    if(${flag_name})
-        target_compile_options(${target} INTERFACE ${flag})
-        message(STATUS "Adding: ${flag} to ${target}")
-    else()
-        message(STATUS "Flag: ${flag} not supported")
-    endif()
-endfunction()
-
-
-function(disable_cxx_warning flag target)
-    string(REPLACE "-W" "HAS_" flag_name ${flag})
-    check_cxx_compiler_flag(${flag} ${flag_name})
-
-    if(${flag_name})
-        string(REPLACE "-W" "-Wno-" neg_flag ${flag})
-        message(STATUS "Adding: ${neg_flag} to ${target}")
-        target_compile_options(${target} INTERFACE ${neg_flag})
-    else()
-        message(STATUS "Warning: ${flag} not supported no need to disable")
-    endif()
-endfunction()
-
-function(disable_c_warning flag target)
-    string(REPLACE "-W" "HAS_" flag_name ${flag})
-    check_c_compiler_flag(${flag} ${flag_name})
-    if(${flag_name})
-        string(REPLACE "-W" "-Wno-" neg_flag ${flag})
-        message(STATUS "Adding: ${neg_flag} to ${target}")
-        target_compile_options(${target} INTERFACE ${neg_flag})
-    else()
-        message(STATUS "Warning: ${flag} not supported no need to disable")
-    endif()
-endfunction()
-
-
-function(sls_disable_c_warning flag)
-    disable_c_warning(${flag} slsProjectCSettings)
-endfunction()
-
-function(sls_enable_cxx_warning flag)
-    enable_cxx_warning(${flag} slsProjectWarnings)
-endfunction()
-
-function(sls_disable_cxx_warning flag)
-    disable_cxx_warning(${flag} slsProjectWarnings)
-endfunction()

cmake/clang-format.cmake

@@ -1,47 +0,0 @@
-# A CMake script to find all source files and setup clang-format targets for them
-
-# Find all source files
-set(ClangFormat_CXX_FILE_EXTENSIONS ${ClangFormat_CXX_FILE_EXTENSIONS} *.cpp *.h *.cxx *.hxx *.hpp *.cc *.ipp *.c)
-file(GLOB_RECURSE ALL_SOURCE_FILES ${ClangFormat_CXX_FILE_EXTENSIONS})
-
-# Don't include some common build folders
-set(ClangFormat_EXCLUDE_PATTERNS ${ClangFormat_EXCLUDE_PATTERNS} "/CMakeFiles/" "cmake")
-
-# get all project files file
-foreach (SOURCE_FILE ${ALL_SOURCE_FILES}) 
-    foreach (EXCLUDE_PATTERN ${ClangFormat_EXCLUDE_PATTERNS})
-        string(FIND ${SOURCE_FILE} ${EXCLUDE_PATTERN} EXCLUDE_FOUND) 
-        if (NOT ${EXCLUDE_FOUND} EQUAL -1) 
-            list(REMOVE_ITEM ALL_SOURCE_FILES ${SOURCE_FILE})
-        endif () 
-    endforeach ()
-endforeach ()
-
-#target for formatting soruce files
-add_custom_target(format
-    COMMENT "Running clang-format to change files"
-    COMMAND ${ClangFormat_BIN}
-    -style=file
-    -i
-    ${ALL_SOURCE_FILES}
-)
-
-
-#target to check format on source files 
-add_custom_target(format-check
-    COMMENT "Checking clang-format changes"
-    # Use ! to negate the result for correct output
-    COMMAND !
-    ${ClangFormat_BIN}
-    -style=file
-    -output-replacements-xml
-    ${ALL_SOURCE_FILES}
-    | grep -q "replacement offset" 
-)
-
-# debug to check which file will be formatted
-add_custom_target(
-    listformatfiles
-    COMMAND
-    echo ${ALL_SOURCE_FILES}
-)

cmake/package_config.cmake

@@ -25,7 +25,6 @@ install(FILES
   DESTINATION ${CMAKE_INSTALL_DIR}
 )
 
-
 if (PROJECT_LIBRARIES OR PROJECT_STATIC_LIBRARIES)
   install(
     EXPORT "${TARGETS_EXPORT_NAME}"

cmake/project-config.cmake.in

@@ -12,10 +12,8 @@ include(CMakeFindDependencyMacro)
 
 set(SLS_USE_HDF5 "@SLS_USE_HDF5@")
 
-
-find_dependency(Threads)
-
 # Add optional dependencies here
+find_dependency(Threads)
 if (SLS_USE_HDF5)
     find_dependency(HDF5)
 endif ()

cmk.sh

@@ -1,9 +1,5 @@
 #!/bin/bash
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
-CMAKE="cmake3"
 BUILDDIR="build"
-INSTALLDIR=""
 HDF5DIR="/opt/hdf5v1.10.0"
 HDF5=0
 COMPILERTHREADS=0
@@ -16,8 +12,6 @@ TESTS=0
 SIMULATOR=0
 CTBGUI=0
 MANUALS=0
-MANUALS_ONLY_RST=0
-MOENCHZMQ=0
 
 
 CLEAN=0
@@ -26,26 +20,22 @@ CMAKE_PRE=""
 CMAKE_POST=""
 
 usage() { echo -e "
-Usage: $0 [-b] [-c] [-d <HDF5 directory>] [-e] [-g] [-h] [-i] [-j <Number of threads>] [-k <CMake command>] [-l <Install directory>] [-m] [-n] [-p] [-r] [-s] [-t] [-u] [-z]  
+Usage: $0 [-c] [-b] [-p] [e] [t] [r] [g] [s] [u] [i] [m] [-h] [-d <HDF5 directory>] [-j] <Number of threads>
  -[no option]: only make
- -b: Builds/Rebuilds CMake files normal mode
  -c: Clean
- -d: HDF5 Custom Directory
- -e: Debug mode
- -g: Build/Rebuilds gui
- -h: Builds/Rebuilds Cmake files with HDF5 package
- -i: Builds tests
- -j: Number of threads to compile through
- -k: CMake command
- -l: Install directory
- -m: Manuals
- -n: Manuals without compiling doxygen (only rst)
+ -b: Builds/Rebuilds CMake files normal mode
  -p: Builds/Rebuilds Python API
- -r: Build/Rebuilds only receiver
- -s: Simulator
+ -h: Builds/Rebuilds Cmake files with HDF5 package
+ -d: HDF5 Custom Directory
  -t: Build/Rebuilds only text client
+ -r: Build/Rebuilds only receiver
+ -g: Build/Rebuilds only gui
+ -s: Simulator
  -u: Chip Test Gui
- -z: Moench zmq processor
+ -j: Number of threads to compile through
+ -e: Debug mode
+ -i: Builds tests
+ -m: Manuals
 
 Rebuild when you switch to a new build and compile in parallel:
 ./cmk.sh -bj5
@@ -81,61 +71,37 @@ For rebuilding only certain sections
  
  " ; exit 1; }
 
-while getopts ":bcd:eghij:k:l:mnpq:rstuz" opt ; do
+while getopts ":bpchd:j:trgeisum" opt ; do
 	case $opt in
 	b) 
 		echo "Building of CMake files Required"
 		REBUILD=1
 		;;
+	p)
+    	echo "Compiling Options: Python" 
+		PYTHON=1
+		REBUILD=1
+		;;   
 	c) 
 		echo "Clean Required"
 		CLEAN=1
 		;;
-	d) 
-		echo "New HDF5 directory: $OPTARG" 
-		HDF5DIR=$OPTARG
-		;;
-	e)
-		echo "Compiling Options: Debug" 
-		DEBUG=1
-		;;  
-	g) 
-		echo "Compiling Options: GUI" 
-		GUI=1
-		REBUILD=1
-		;; 
 	h) 
 		echo "Building of CMake files with HDF5 option Required"
 		HDF5=1
 		REBUILD=1
 		;;
-	i)
-		echo "Compiling Options: Tests" 
-		TESTS=1
+	d) 
+		echo "New HDF5 directory: $OPTARG" 
+		HDF5DIR=$OPTARG
 		;;
 	j) 
 		echo "Number of compiler threads: $OPTARG" 
 		COMPILERTHREADS=$OPTARG
 		;;
-	k)
-		echo "CMake command: $OPTARG"
-		CMAKE="$OPTARG"
-		;;
-	l)
-		echo "CMake install directory: $OPTARG"
-		INSTALLDIR="$OPTARG"
-		;;
-	m)	
-		echo "Compiling Manuals"
-		MANUALS=1
-		;;
-	n)	
-		echo "Compiling Manuals (Only RST)"
-		MANUALS_ONLY_RST=1
-		;;
-	p)
-    	echo "Compiling Options: Python" 
-		PYTHON=1
+	t) 
+    	echo "Compiling Options: Text Client" 
+		TEXTCLIENT=1
 		REBUILD=1
 		;;      
 	r) 
@@ -143,23 +109,31 @@ while getopts ":bcd:eghij:k:l:mnpq:rstuz" opt ; do
 		RECEIVER=1
 		REBUILD=1
 		;;      
+	g) 
+		echo "Compiling Options: GUI" 
+		GUI=1
+		REBUILD=1
+		;;  
+	e)
+		echo "Compiling Options: Debug" 
+		DEBUG=1
+		;;   
+	i)
+		echo "Compiling Options: Tests" 
+		TESTS=1
+		;;   
 	s)
 		echo "Compiling Options: Simulator" 
 		SIMULATOR=1
 		;; 
-	t) 
-    	echo "Compiling Options: Text Client" 
-		TEXTCLIENT=1
-		REBUILD=1
+	m)	
+		echo "Compiling Manuals"
+		MANUALS=1
 		;;
 	u)
 		echo "Compiling Options: Chip Test Gui"
 		CTBGUI=1
 		;;
-	z)	
-		echo "Compiling Moench Zmq Processor"
-		MOENCHZMQ=1
-		;;
   \?)
     echo "Invalid option: -$OPTARG" 
 		usage
@@ -236,12 +210,6 @@ if [ $MANUALS -eq 1 ]; then
 	echo "Manuals Option enabled"
 fi 
 
-#Moench zmq processor
-if [ $MOENCHZMQ -eq 1 ]; then
-	CMAKE_POST+=" -DSLS_USE_MOENCH=ON "
-	echo "Moench Zmq Processor Option enabled"
-fi 
-
 #Chip Test Gui
 if [ $CTBGUI -eq 1 ]; then
 	CMAKE_POST+=" -DSLS_USE_CTBGUI=ON "
@@ -254,6 +222,7 @@ if [ $TESTS -eq 1 ]; then
 	echo "Tests Option enabled"
 fi 
 
+
 #hdf5 rebuild
 if [ $HDF5 -eq 1 ]; then
 #	CMAKE_PRE+="HDF5_ROOT="$HDF5DIR
@@ -265,15 +234,7 @@ else
 fi
 
 
-#install
-if [ -n "$INSTALLDIR" ]; then
-	CMAKE_POST+=" -DCMAKE_INSTALL_PREFIX=$INSTALLDIR"
-	CMAKE_POST+=" -DCMAKE_FIND_ROOT_PATH=$INSTALLDIR"
-fi
-
-
 #enter build dir
-#pushd $BUILDDIR;
 cd $BUILDDIR;
 echo "in "$PWD
 
@@ -282,7 +243,7 @@ echo "in "$PWD
 #cmake
 if [ $REBUILD -eq 1 ]; then
 	rm -f CMakeCache.txt
-	BUILDCOMMAND="$CMAKE_PRE $CMAKE $CMAKE_POST .."
+	BUILDCOMMAND="$CMAKE_PRE cmake3 $CMAKE_POST .."
 	echo $BUILDCOMMAND
 	eval $BUILDCOMMAND
 fi
@@ -295,42 +256,15 @@ fi
 
 #make
 if [ $COMPILERTHREADS -gt 0 ]; then
-	if [ $MANUALS -eq 0 ] && [ $MANUALS_ONLY_RST -eq 0 ]; then
-		BUILDCOMMAND="make -j$COMPILERTHREADS"
-		echo $BUILDCOMMAND
-		eval $BUILDCOMMAND
-	else
-		if [ $MANUALS -eq 1 ]; then
-			BUILDCOMMAND="make docs -j$COMPILERTHREADS"
-			echo $BUILDCOMMAND
-			eval $BUILDCOMMAND
-		else
-			BUILDCOMMAND="make rst -j$COMPILERTHREADS"
-			echo $BUILDCOMMAND
-			eval $BUILDCOMMAND		
-		fi
-	fi 
+	BUILDCOMMAND="make -j$COMPILERTHREADS"
+	echo $BUILDCOMMAND
+	eval $BUILDCOMMAND
 else
-	if [ $MANUALS -eq 0 ] && [ $MANUALS_ONLY_RST -eq 0 ]; then
-		echo "make"
-		make
-	else
-		if [ $MANUALS -eq 1 ]; then
-			echo "make docs"
-			make docs
-		else
-			echo "make rst"
-			make rst
-		fi
-	fi 
+	make
 fi
 
-
-#install
-if [ -n "$INSTALLDIR" ]; then
-	make install
-#	popd
-#	$CMAKE --build $BUILDDIR --target install
+if [ $MANUALS -eq 1 ]; then
+	make docs
 fi 
 
 

conda-recepie/build.sh

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 
 mkdir build
 mkdir install
@@ -10,15 +8,13 @@ cmake .. \
       -DSLS_USE_TEXTCLIENT=ON \
       -DSLS_USE_RECEIVER=ON \
       -DSLS_USE_GUI=ON \
-      -DSLS_USE_MOENCH=ON\
       -DSLS_USE_TESTS=ON \
       -DSLS_USE_PYTHON=OFF \
       -DCMAKE_BUILD_TYPE=Release \
       -DSLS_USE_HDF5=OFF\
      
-NCORES=$(getconf _NPROCESSORS_ONLN)
-echo "Building using: ${NCORES} cores"
-cmake --build . -- -j${NCORES}
+
+cmake --build . -- -j10
 cmake --build . --target install
 
-CTEST_OUTPUT_ON_FAILURE=1 ctest -j 1
+CTEST_OUTPUT_ON_FAILURE=1 ctest -j 2

conda-recepie/build_pylib.sh

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 
 echo "|<-------- starting python build"
 cd python

conda-recepie/conda_build_config.yaml

@@ -1,7 +1,7 @@
 python:
+    - 3.6
+    - 3.7
     - 3.8
-    - 3.9
-    - 3.10
-    - 3.11 
-    - 3.12
     
+numpy: 
+    - 1.17

conda-recepie/copy_ctbgui.sh

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 mkdir $PREFIX/lib
 mkdir $PREFIX/bin
 mkdir $PREFIX/include

conda-recepie/copy_gui.sh

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 #Copy the GUI 
-mkdir -p $PREFIX/bin
-cp build/install/bin/slsDetectorGui $PREFIX/bin/.
+mkdir $PREFIX/bin
+cp build/bin/slsDetectorGui $PREFIX/bin/.

conda-recepie/copy_lib.sh

@@ -1,12 +1,14 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 
-mkdir -p $PREFIX/lib
-mkdir -p $PREFIX/bin
-mkdir -p $PREFIX/include/sls
-# mkdir $PREFIX/include/slsDetectorPackage
+mkdir $PREFIX/lib
+mkdir $PREFIX/bin
+mkdir $PREFIX/include
+mkdir $PREFIX/include/slsDetectorPackage
 
 #Shared and static libraries
+# cp build/bin/libSlsDetector.so $PREFIX/lib/.
+# cp build/bin/libSlsReceiver.so $PREFIX/lib/.
+# cp build/bin/libSlsSupport.so $PREFIX/lib/.
+
 cp build/install/lib/* $PREFIX/lib/
 
 #Binaries
@@ -18,5 +20,5 @@ cp build/install/bin/slsReceiver $PREFIX/bin/.
 cp build/install/bin/slsMultiReceiver $PREFIX/bin/.
 
 
-cp build/install/include/sls/* $PREFIX/include/sls
-cp -rv build/install/share $PREFIX
+cp build/install/include/* $PREFIX/include/
+cp -r build/install/share/ $PREFIX/share

conda-recepie/copy_moench.sh

@@ -1,6 +0,0 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
-
-#Copy the Moench executables 
-mkdir -p $PREFIX/bin
-cp build/install/bin/moench* $PREFIX/bin/.

conda-recepie/meta.yaml

@@ -17,7 +17,9 @@ requirements:
     - {{ compiler('c') }}
     - {{compiler('cxx')}}
     - cmake
-    - qt 5.*
+    - qwt 6.*
+    - qt 4.8.*
+    - zeromq
     - xorg-libx11
     - xorg-libice
     - xorg-libxext
@@ -31,11 +33,11 @@ requirements:
     - {{ cdt('libselinux') }}            # [linux]
     - {{ cdt('libxdamage') }}            # [linux]
     - {{ cdt('libxxf86vm') }}            # [linux]
-    - expat
 
   host:
     - libstdcxx-ng
     - libgcc-ng
+    - zeromq
     - xorg-libx11
     - xorg-libice
     - xorg-libxext
@@ -43,9 +45,9 @@ requirements:
     - xorg-libxau
     - xorg-libxrender
     - xorg-libxfixes
-    - expat
 
   run:
+    - zeromq
     - libstdcxx-ng
     - libgcc-ng 
 
@@ -55,16 +57,10 @@ outputs:
     script: copy_lib.sh
 
     requirements:
-      build:
-        - {{ compiler('c') }}
-        - {{compiler('cxx')}}
-        - libstdcxx-ng
-        - libgcc-ng
-
-
       run: 
         - libstdcxx-ng
         - libgcc-ng
+        - zeromq
 
   - name: slsdet
 
@@ -77,13 +73,9 @@ outputs:
         - {{compiler('cxx')}}
         - {{ pin_subpackage('slsdetlib', exact=True) }}
         - setuptools
-        - pybind11=2.11
 
       host:
         - python
-        - {{ pin_subpackage('slsdetlib', exact=True) }}
-        - pybind11=2.11
-
 
       run:
         - libstdcxx-ng
@@ -100,27 +92,7 @@ outputs:
   - name: slsdetgui
     script: copy_gui.sh
     requirements:
-
-      build:
-        - {{ compiler('c') }}
-        - {{compiler('cxx')}}
-        - {{ pin_subpackage('slsdetlib', exact=True) }}
-
       run:
         - {{ pin_subpackage('slsdetlib', exact=True) }}
-        - qt 5.*
-        - expat
-
-  - name: moenchzmq
-    script: copy_moench.sh
-    requirements:
-
-      build:
-        - {{ compiler('c') }}
-        - {{compiler('cxx')}}
-        - {{ pin_subpackage('slsdetlib', exact=True) }}
-
-
-      run:
-        - {{ pin_subpackage('slsdetlib', exact=True) }}
-        - expat
+        - qwt 6.*
+        - qt 4.8.*

conda-recepie/run_test.sh

@@ -1,3 +1 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 ctest -j2

ctbGui/CMakeLists.txt

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 
 
 find_package(ROOT CONFIG REQUIRED  COMPONENTS Core Gui)
@@ -34,7 +32,7 @@ add_executable(ctbGui
     ctbAdcs.cpp
     ctbPattern.cpp
     ctbAcquisition.cpp
-    ${CMAKE_SOURCE_DIR}/slsDetectorCalibration/tiffio/src/tiffIO.cpp
+    ${CMAKE_SOURCE_DIR}/slsDetectorCalibration/tiffIO.cpp
 )
 
 
@@ -43,7 +41,6 @@ target_include_directories(ctbGui PRIVATE
     ${CMAKE_SOURCE_DIR}/slsDetectorCalibration/dataStructures
     ${CMAKE_SOURCE_DIR}/slsDetectorCalibration/interpolations
     ${CMAKE_SOURCE_DIR}/slsDetectorCalibration/
-    ${CMAKE_SOURCE_DIR}/slsDetectorCalibration/tiffio/include/
 )
 
 # Headders needed for ROOT dictionary generation
@@ -62,12 +59,14 @@ set( HEADERS
 #set(ROOT_INCLUDE_PATH ${CMAKE_CURRENT_SOURCE_DIR})
 
 # ROOT dictionary generation 
+include("${ROOT_DIR}/modules/RootNewMacros.cmake")
 root_generate_dictionary(ctbDict ${HEADERS} LINKDEF ctbLinkDef.h)
 add_library(ctbRootLib SHARED ctbDict.cxx)
 target_include_directories(ctbRootLib PUBLIC ${CMAKE_CURRENT_SOURCE_DIR})
 target_link_libraries(ctbRootLib PUBLIC 
     ROOT::Core 
     slsDetectorShared
+    slsSupportLib
     ${ROOT_LIBRARIES} 
     ${ROOT_EXE_LINKER_FLAGS}
 )
@@ -79,6 +78,7 @@ set_target_properties(
 
 target_link_libraries(ctbGui PUBLIC 
     slsDetectorShared
+    slsSupportLib
     ctbRootLib
     ${TIFF_LIBRARIES}
 )
@@ -87,4 +87,3 @@ set_target_properties(ctbGui PROPERTIES
     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
 
 )
-

ctbGui/Makefile.root5

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 
 
 INCS=ctbMain.h ctbDacs.h   ctbPattern.h  ctbSignals.h  ctbAdcs.h ctbAcquisition.h ctbPowers.h   ctbSlowAdcs.h 

ctbGui/Makefile.root6

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 
 
 INCS=ctbMain.h ctbDacs.h   ctbPattern.h  ctbSignals.h  ctbAdcs.h ctbAcquisition.h ctbPowers.h   ctbSlowAdcs.h  

ctbGui/ctbAcquisition.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 //#define TESTADC
 
 
@@ -18,7 +16,6 @@
 #include <TColor.h>
 #include <TTimer.h>
 #include <TH2F.h>
-#include <TSystem.h>
 
 
 #include <stdio.h>
@@ -28,8 +25,8 @@
 
 #include "ctbAcquisition.h"
 #include "ctbDefs.h"
-#include "sls/Detector.h"
-#include "sls/sls_detector_defs.h"
+#include "Detector.h"
+#include "sls_detector_defs.h"
 #include "ctbMain.h"
 #include "moench03CtbData.h" 
 //#include "moench03TCtbData.h" 
@@ -46,7 +43,7 @@
 #include "moench04CtbZmqData.h"
 #include "moench04CtbZmq10GbData.h"
 #include "deserializer.h"
-#include "sls/detectorData.h"
+#include "detectorData.h"
 #include "imageZmq16bit.h"
 #include "imageZmq32bit.h"
 
@@ -828,14 +825,14 @@ void ctbAcquisition::setCanvas(TCanvas* c) {
   myCanvas->AddExec("dynamic",Form("((ctbAcquisition*)%p)->canvasClicked()",this));
   // myCanvas->AddExec("ex","canvasClicked()");
 }
-void ctbAcquisition::dataCallback(sls::detectorData *data, long unsigned int index, unsigned int dum, void* pArgs) {
+void ctbAcquisition::dataCallback(detectorData *data, long unsigned int index, unsigned int dum, void* pArgs) {
 
   // return 
   ((ctbAcquisition*)pArgs)->plotData(data,index);
 }
 
 
-int ctbAcquisition::plotData(sls::detectorData *data, int index) {
+int ctbAcquisition::plotData(detectorData *data, int index) {
 
   /*
 ******************************************************************
@@ -988,7 +985,7 @@ sample1 (dbit0 + dbit1 +...)if (cmd == "rx_dbitlist") {
 	ped=0;
 	aval=dataStructure->getValue(data->data,x,y);
 	//aval=dataStructure->getChannel(data->data,x,y);
-	// cout << x << " " <<y << " "<< aval << endl;
+	cout << x << " " <<y << " "<< aval << endl;
 	if (cbGetPedestal->IsOn()) {
 	  if (photonFinder) {
 	    photonFinder->addToPedestal(aval,x,y);

ctbGui/ctbAcquisition.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #ifndef CTBACQUISITION_H
 #define CTBACQUISITION_H
 #include  <TGFrame.h>
@@ -28,8 +26,8 @@ class TGTextButton;
 namespace sls
 {
    class Detector;
-   class detectorData;
 };
+class detectorData;
 
 template <class dataType> class slsDetectorData;
 
@@ -201,10 +199,10 @@ class ctbAcquisition : public TGGroupFrame {
    void setBitGraph (int i ,int en, Pixel_t col);
    void startAcquisition();
    static   void progressCallback(double,void*);
-   static void dataCallback(sls::detectorData*, long unsigned int, unsigned int,  void*);
+   static void dataCallback(detectorData*, long unsigned int, unsigned int,  void*);
    int StopFlag;
    
-   int plotData(sls::detectorData*, int);
+   int plotData(detectorData*, int);
 
    void setPatternFile(const char* t);
 

ctbGui/ctbAdcs.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include <TApplication.h>
 #include <TGClient.h>
 #include <TCanvas.h>
@@ -27,7 +25,7 @@
 
 #include "ctbAdcs.h"
 #include "ctbDefs.h"
-#include "sls/Detector.h"
+#include "Detector.h"
 
 using namespace std;
 

ctbGui/ctbAdcs.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 
 
 

ctbGui/ctbDacs.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 
 #include <stdio.h>
 #include <iostream>
@@ -12,8 +10,8 @@
 
 #include "ctbDacs.h"
 #include "ctbDefs.h"
-#include "sls/Detector.h"
-#include "sls/sls_detector_defs.h"
+#include "Detector.h"
+#include "sls_detector_defs.h"
 
 using namespace std;
 

ctbGui/ctbDacs.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 
 
 #ifndef CTBDACS_H

ctbGui/ctbDefs.h

@@ -1,13 +1,11 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #pragma once
 
 #include <string>
 #include <stdexcept>
 #include <chrono>
 
-//#include "sls/sls_detector_exceptions.h"
-//#include "sls/ansi.h"
+//#include "sls_detector_exceptions.h"
+//#include "ansi.h"
 #define RED    	 	"\x1b[31m"
 #define RESET   	"\x1b[0m"
 #define BOLD    	"\x1b[1m"

ctbGui/ctbGui.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include <TApplication.h>
 #include <TColor.h>
 
@@ -11,8 +9,8 @@
 #include <fstream>
 #include <string>
 
-#include "sls/Detector.h"
-#include "sls/sls_detector_defs.h"
+#include "Detector.h"
+#include "sls_detector_defs.h"
 //#include "sls_receiver_defs.h"
 #include "ctbMain.h"
 #include "ctbDefs.h"

ctbGui/ctbLinkDef.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #pragma link C++ class ctbMain;
 #pragma link C++ class ctbDacs;
 #pragma link C++ class ctbDac;

ctbGui/ctbMain.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include <TApplication.h>
 #include <TGClient.h>
 #include <TCanvas.h>
@@ -36,7 +34,7 @@
 #include <fstream>
 #include <string>
 
-#include "sls/Detector.h"
+#include "Detector.h"
 #include "ctbDefs.h"
 #include "ctbMain.h"
 #include "ctbDacs.h"

ctbGui/ctbMain.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #ifndef CTBMAIN_H
 #define CTBMAIN_H
 #include <TGFrame.h>

ctbGui/ctbPattern.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include <TApplication.h>
 #include <TGClient.h>
 #include <TCanvas.h>
@@ -27,7 +25,7 @@
 
 #include "ctbPattern.h"
 #include "ctbDefs.h"
-#include "sls/Detector.h"
+#include "Detector.h"
 #include <chrono>
 using namespace std;
 

ctbGui/ctbPattern.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #ifndef CTBPATTERN_H
 #define CTBPATTERN_H
 #include  <TGFrame.h>

ctbGui/ctbPowers.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include  <TGFrame.h>
 
 
@@ -15,8 +13,8 @@
 #include "ctbDefs.h"
 #include "ctbDacs.h"
 #include "ctbPowers.h"
-#include "sls/Detector.h"
-#include "sls/sls_detector_defs.h"
+#include "Detector.h"
+#include "sls_detector_defs.h"
 
 using namespace std;
 

ctbGui/ctbPowers.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #ifndef CTBPOWERS_H
 #define CTBPOWERS_H
 

ctbGui/ctbSignals.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include <TApplication.h>
 #include <TGClient.h>
 #include <TCanvas.h>
@@ -37,7 +35,7 @@
 
 #include "ctbSignals.h"
 #include "ctbDefs.h"
-#include "sls/Detector.h"
+#include "Detector.h"
 
 using namespace std;
 

ctbGui/ctbSignals.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 #ifndef CTBSIGNALS_H
 #define CTBSIGNALS_H
 #include  <TGFrame.h>

ctbGui/ctbSlowAdcs.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 
 #include <stdio.h>
 #include <iostream>
@@ -12,8 +10,8 @@
 
 #include "ctbSlowAdcs.h"
 #include "ctbDefs.h"
-#include "sls/Detector.h"
-#include "sls/sls_detector_defs.h"
+#include "Detector.h"
+#include "sls_detector_defs.h"
 
 using namespace std;
 

ctbGui/ctbSlowAdcs.h

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 
 
 #ifndef CTBSLOWADCS_H

ctbGui/patternGenerator/deserializer.cpp

@@ -0,0 +1,110 @@
+
+#include <stdlib.h>  
+#include <stdint.h>  
+#include <string.h>  
+#include <sys/utsname.h>   
+#include <sys/types.h>
+#include <unistd.h>  
+#include <sys/types.h>
+#include <sys/stat.h>
+#include <errno.h>
+#include <math.h>
+#include <fcntl.h>
+#include <stdarg.h>
+#include <stdio.h>
+#include <string.h>
+#include <unistd.h>
+
+int main(int argc, char *argv[]) {
+
+  int iarg;
+  char fname[10000];
+  uint64_t word;
+  int val[64];
+  int bit[64];
+  FILE *fdin;
+  
+  int nb=2;
+  int off=0;
+  int ioff=0;
+  int dr=24;
+  int idr=0;
+  int ib=0;
+  int iw=0;
+  bit[0]=19;
+  bit[1]=8;
+  //  for (iarg=0; iarg<argc; iarg++) printf("%d %s\n",iarg, argv[iarg]);
+  
+  if (argc<2) printf("Error: usage is %s fname [dr off  b0 b1 bn]\n");
+  
+  if (argc>2) dr=atoi(argv[2]);
+  if (argc>3) off=atoi(argv[3]);
+  if (argc>4) {
+  for (ib=0; ib<64; ib++) {
+    if (argc>4+ib) {
+      bit[ib]=atoi(argv[4+ib]);
+      nb++;
+    }
+  }
+  
+  }
+  
+  idr=0;
+  for (ib=0; ib<nb; ib++) {
+    val[ib]=0;
+  }
+  
+  
+  fdin=fopen(argv[1],"rb");
+  if (fdin==NULL) {
+    printf("Cannot open input file %s for reading\n",argv[1]);
+    return 200;
+  } 
+  
+  while (fread((void*)&word, 8, 1, fdin)) {
+    //   printf("%llx\n",word);
+    if (ioff<off) ioff++;
+    else {
+      
+      for (ib=0; ib<nb; ib++) {
+	if (word&(1<<bit[ib])) 	  val[ib]|=(1<<idr);
+      }
+      idr++;
+      if (idr==dr) {
+	idr=0;
+	fprintf(stdout,"%d\t",iw++);
+	for (ib=0; ib<nb; ib++) {
+#ifdef HEX
+	  fprintf(stdout,"%08llx\t",val[ib]);
+#else
+	  fprintf(stdout,"%lld\t",val[ib]);
+	  
+#endif
+	  
+	  val[ib]=0;
+	}
+	fprintf(stdout,"\n");
+      }
+      
+    }
+
+  }
+  if (idr!=0) {
+    fprintf(stdout,"%d\t",iw++);
+    for (ib=0; ib<nb; ib++) {
+#ifdef HEX
+	  fprintf(stdout,"%08llx\t",val[ib]);
+#else
+	  fprintf(stdout,"%lld\t",val[ib]);
+	  
+#endif
+	  
+	  val[ib]=0;
+    }
+    fprintf(stdout,"\n");
+  }
+
+  fclose(fdin);
+
+  return 0;
+}

ctbGui/patternGenerator/generate.sh

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 if [ "$#" -eq 0 ]; then
     echo "Wrong number of arguments: usage should be $0 patname"
     exit 1
@@ -21,10 +19,8 @@ fi
 
 if [ -f "$infile" ]
 then
-dir=$(dirname $infile)
-gcc -DINFILE="\"$infile\"" -DOUTFILE="\"$outfile\""  -DOUTFILEBIN="\"$outfilebin\"" -o $exe generator.c -I$dir; 
+gcc -DINFILE="\"$infile\"" -DOUTFILE="\"$outfile\""  -DOUTFILEBIN="\"$outfilebin\"" -o $exe generator.c ; 
 echo compiling
-echo gcc -DINFILE="\"$infile\"" -DOUTFILE="\"$outfile\""  -DOUTFILEBIN="\"$outfilebin\"" -o $exe generator.c  -I$dir; 
 $exe ; 
 echo cleaning
 rm $exe

ctbGui/patternGenerator/generator.c

@@ -0,0 +1,177 @@
+/****************************************************************************
+usage to generate a patter test.pat from test.p
+
+gcc -DINFILE="\"test.p\"" -DOUTFILE="\"test.pat\"" -o test.exe generator.c ; ./test.exe ; rm test.exe
+
+
+*************************************************************************/
+
+#include <stdlib.h>  
+#include <stdint.h>  
+#include <string.h>  
+#include <sys/utsname.h>   
+#include <sys/types.h>
+#include <unistd.h>  
+#include <sys/types.h>
+#include <sys/stat.h>
+#include <errno.h>
+#include <math.h>
+#include <fcntl.h>
+#include <stdarg.h>
+#include <stdio.h>
+#include <string.h>
+#include <unistd.h>
+
+#define MAXLOOPS 3
+#define MAXTIMERS 3
+#define MAXWORDS 1024
+
+
+
+uint64_t pat=0;
+uint64_t iopat=0;
+uint64_t clkpat=0;
+
+int iaddr=0;
+int waitaddr[3]={MAXWORDS,MAXWORDS,MAXWORDS};
+int startloopaddr[3]={MAXWORDS,MAXWORDS,MAXWORDS}; 
+int stoploopaddr[3]={MAXWORDS,MAXWORDS,MAXWORDS}; 
+int start=0, stop=0;
+uint64_t waittime[3]={0,0,0};
+int nloop[3]={0,0,0};
+
+char infile[10000], outfile[10000];
+
+FILE *fd, *fd1;
+uint64_t PAT[MAXWORDS];
+
+
+int i,ii,iii,j,jj,jjj,pixx,pixy,memx,memy,muxout,memclk,colclk,rowclk,muxclk,memcol,memrow,loopcounter;
+
+void setstart() {
+  start=iaddr;
+}
+
+void setstop() {
+  stop=iaddr;
+}
+
+void setinput(int bit) {
+  uint64_t mask=1;
+  mask=mask<<bit;
+  iopat &= ~mask;
+}
+
+void setoutput(int bit) {
+  uint64_t mask=1;
+  mask=mask<<bit;
+  iopat |= mask;
+}
+
+void setclk(int bit) {
+  uint64_t mask=1;
+  mask=mask<<bit;
+  iopat |= mask;
+  clkpat |= mask;
+}
+
+void clearbit(int bit){
+  uint64_t mask=1;
+  mask=mask<<bit;
+  pat &= ~mask;
+}
+void setbit(int bit){
+  uint64_t mask=1;
+  mask=mask<<bit;
+  pat |= mask;
+}
+
+int checkbit(int bit) {
+  uint64_t mask=1;
+  mask=mask<<bit;
+  return (pat & mask ) >>bit;
+}
+
+void setstartloop(int iloop) {
+  if (iloop>=0 && iloop<MAXLOOPS)
+    startloopaddr[iloop]=iaddr;
+}
+
+
+void setstoploop(int iloop) {
+  if (iloop>=0 && iloop<MAXLOOPS)
+    stoploopaddr[iloop]=iaddr;
+}
+
+
+void setnloop(int iloop, int n) {
+  if (iloop>=0 && iloop<MAXLOOPS)
+    nloop[iloop]=n;
+}
+
+void setwaitpoint(int iloop) {
+  if (iloop>=0 && iloop<MAXTIMERS)
+    waitaddr[iloop]=iaddr;
+}
+
+
+void setwaittime(int iloop, uint64_t t) {
+  if (iloop>=0 && iloop<MAXTIMERS)
+    waittime[iloop]=t;
+}
+
+
+
+
+void pw(){
+  if (iaddr<MAXWORDS)
+    PAT[iaddr]= pat;
+  fprintf(fd,"patword 0x%04x 0x%016llx\n",iaddr, pat);
+  iaddr++;
+  if (iaddr>=MAXWORDS) printf("ERROR: too many word in the pattern (%d instead of %d)!",iaddr, MAXWORDS);
+}
+
+int parseCommand(int clk, int cmdbit, int cmd, int length) {
+  int ibit;
+  clearbit(clk);
+  for (ibit=0; ibit<length; ibit++) {
+    if (cmd&(1>>ibit))
+      setbit(cmdbit);
+    else
+      clearbit(cmdbit);
+    pw();
+    /******/
+    setbit(clk);
+    pw();
+    /******/
+  }
+};
+
+
+
+main(void) {
+  int iloop=0;
+  fd=fopen(OUTFILE,"w");
+#include INFILE
+
+  fprintf(fd,"patioctrl 0x%016llx\n",iopat);
+  fprintf(fd,"patclkctrl 0x%016llx\n",clkpat);
+  fprintf(fd,"patlimits 0x%04x 0x%04x\n",start, stop);
+
+  for (iloop=0; iloop<MAXLOOPS; iloop++) {
+    fprintf(fd,"patloop%d 0x%04x 0x%04x\n",iloop, startloopaddr[iloop], stoploopaddr[iloop]);
+    if ( startloopaddr[iloop]<0 || stoploopaddr[iloop]<= startloopaddr[iloop]) nloop[iloop]=0;
+    fprintf(fd,"patnloop%d %d\n",iloop, nloop[iloop]);
+  }
+
+  for (iloop=0; iloop<MAXTIMERS; iloop++) {
+    fprintf(fd,"patwait%d 0x%04x\n",iloop, waitaddr[iloop]);
+    if (waitaddr[iloop]<0) waittime[iloop]=0;
+    fprintf(fd,"patwaittime%d %lld\n",iloop, waittime[iloop]);
+  }
+  
+  close((int)fd);
+  fd1=fopen(OUTFILEBIN,"w");
+  fwrite(PAT,sizeof(uint64_t),iaddr, fd1);
+  close((int)fd1);
+}

ctbGui/patternGenerator/test.p

@@ -0,0 +1,201 @@
+//define signals and directions (Input, outputs, clocks)
+
+
+#define compTestIN 1
+setoutput(compTestIN);
+
+#define curON 32
+setoutput(curON);
+
+#define side_clk 2
+setclk(side_clk);
+
+#define side_din 3
+setoutput(side_din);
+
+#define clear_shr 4
+setoutput(clear_shr);
+
+#define bottom_din 5
+setoutput(bottom_din);
+
+#define bottom_clk 6
+setclk(bottom_clk);
+
+#define gHG 7
+setoutput(gHG);
+
+#define bypassCDS 31
+setoutput(bypassCDS);
+
+
+#define ENprechPRE 8
+setoutput(ENprechPRE);
+
+
+#define res 9
+setoutput(res);
+
+#define pulseOFF 30
+setoutput(pulseOFF);
+
+#define connCDS 27
+setoutput(connCDS);
+
+#define Dsg_1 24
+setoutput(Dsg_1);
+
+
+#define Dsg_2 25
+setoutput(Dsg_2);
+
+
+#define Dsg_3 23
+setoutput(Dsg_3);
+
+#define sto0 10
+setoutput(sto0);
+
+#define sto1 11
+setoutput(sto1);
+
+#define sto2 12
+setoutput(sto2);
+
+#define resCDS 13
+setoutput(resCDS);
+
+#define prechargeConnect 14
+setoutput(prechargeConnect);
+
+#define pulse 15
+setoutput(pulse);
+
+#define PCT_mode 21
+setoutput(PCT_mode);
+
+#define res_DGS 16
+setoutput(res_DGS);
+
+#define adc_ena 17
+setoutput(adc_ena);
+
+
+#define CLKBIT 18
+setclk(CLKBIT);
+
+
+#define adc_sync 63
+setoutput(adc_sync);
+
+
+
+
+
+	  
+#define PW pw()
+#define SB(x) setbit(x) 
+#define CB(x) clearbit(x)
+#define CLOCK  clearbit(CLKBIT); pw();setbit(CLKBIT);pw()
+#define LCLOCK  clearbit(CLKBIT); pw();setbit(CLKBIT);pw();clearbit(CLKBIT); pw()
+#define CLOCKS(x) for (i=0;i<x;i++) {clearbit(CLKBIT);pw(); setbit(CLKBIT); pw();}
+#define STOP setstop();
+#define START setstart();
+#define REPEAT(x) for (i=0;i<(x);i++) {pw();}
+#define DOFOR(x) for (j=0;j<(x);j++) {
+// }				     
+#define STARTUP1 CB(compTestIN);SB(clear_shr);CB(side_clk);CB(side_din);CB(bottom_din);CB(bottom_clk);
+#define STARTUP2 CB(pulse);SB(PCT_mode);SB(pulseOFF);CB(curON);
+#define STARTUP3 SB(res);SB(gHG);SB(ENprechPRE);
+#define STARTUP4 SB(bypassCDS); CB(connCDS);CB(sto0);SB(sto1);SB(sto2);
+#define STARTUP5 SB(resCDS);CB(Dsg_1);CB(Dsg_2);SB(Dsg_3);CB(prechargeConnect);SB(res_DGS);
+#define STARTUP STARTUP1 STARTUP2 STARTUP3 STARTUP4 STARTUP5 PW;
+
+
+
+
+
+//****NOTES****//
+//FUNCTIONS
+//Declare functions at the beginning 
+void load_pix(int nx, int ny)
+{//SELECT PIXEL 1,1 for readout
+SB(clear_shr);PW;PW;
+CB(clear_shr);PW;PW;PW;PW;
+
+SB(side_din);PW;
+SB(side_clk);PW;
+CB(side_din);
+setstartloop(0); //loop on the rows
+SB(side_clk);PW;
+setstoploop(0);  //finish loop on the rows
+setnloop(0,ny); //set number row selected -can be changed dynamically
+CB(side_clk);PW;
+SB(bottom_din);PW;
+SB(bottom_clk);PW;
+CB(bottom_din);
+setstartloop(1); //loop on the columns
+SB(bottom_clk);PW;
+setstoploop(1); //loop on the columns
+setnloop(1,ny); //set number columns selected -can be changed dynamically
+}
+   
+void load_col(void)
+{//SELECT COLUMN 1 for readout
+SB(clear_shr);PW;PW;
+CB(clear_shr);PW;PW;PW;PW;
+SB(bottom_din);PW;
+SB(bottom_clk);PW;
+CB(bottom_clk);PW;
+CB(bottom_din);PW;
+}
+//END of FUNCTIONS
+////////////////////////////////////////////////////////
+//LET BYPASS PREAMP AND CDS and write on preamp out.//
+//THIS ALLOWS CHECKING SOURCE FOLLOWERS               //
+////////////////////////////////////////////////////////
+
+   
+PW;
+   
+SB(5); PW;
+
+CB(5); PW;
+
+START; //pattern starts from here
+STARTUP;
+setwaitpoint(0); //set wait points
+PW;
+setwaittime(0,20); //wait time - can be changed dynamically
+SB(adc_ena);PW;
+   printf("ADC sync %x %d %llx\n",iaddr,adc_sync, pat);
+SB(adc_sync);PW;
+   printf("ADC sync %x %d  %llx\n",iaddr, adc_sync, pat);
+CB(gHG);
+setwaitpoint(1); //set wait points
+setwaittime(1,16); //wait time - can be changed dynamically
+CB(adc_sync);PW;
+load_pix(10, 20);
+
+CB(res);
+//CB(Dsg_3);PW;
+CB(res_DGS);
+setwaitpoint(2); //set wait points
+setwaittime(2,1000); //wait time - can be changed dynamically
+
+//SB(res_DGS);
+//PW;
+//SB(Dsg_3);
+//
+//CB(connCDS);
+//TEST SIGNALS END
+//
+REPEAT(20)
+
+//****************//
+//*FINAL COMMANDS*//
+//****************//
+CB(adc_ena);PW;
+//STARTUP;
+STOP; PW; //stops here
+//REPEAT(4);

docs/CMakeLists.txt

@@ -1,5 +1,3 @@
-# SPDX-License-Identifier: LGPL-3.0-or-other
-# Copyright (C) 2021 Contributors to the SLS Detector Package
 find_package(Doxygen REQUIRED)
 find_package(Sphinx REQUIRED)
 
@@ -40,24 +38,12 @@ set(SPHINX_SOURCE_FILES
   src/pydetector.rst
   src/pyenums.rst
   src/pyexamples.rst
-  src/servers.rst
-  src/receiver_api.rst
+  src/receiver.rst
   src/result.rst
   src/type_traits.rst
   src/ToString.rst
   src/examples.rst
-  src/pygettingstarted.rst
-  src/firmware.rst
-  src/serverupgrade.rst
-  src/virtualserver.rst
-  src/serverdefaults.rst
-  src/quick_start_guide.rst
-  src/troubleshooting.rst
-  src/receivers.rst
-  src/slsreceiver.rst
-  src/udpheader.rst
-  src/udpconfig.rst
-  src/udpdetspec.rst
+  
 )
 
 foreach(filename ${SPHINX_SOURCE_FILES})
@@ -70,21 +56,8 @@ configure_file(
   "${SPHINX_BUILD}/conf.py"
   @ONLY)
 
-configure_file(
-  "${CMAKE_CURRENT_SOURCE_DIR}/gen_server_doc.py.in"
-  "${SPHINX_BUILD}/gen_server_doc.py"
-  @ONLY)
-
-  configure_file(
-  "${CMAKE_CURRENT_SOURCE_DIR}/static/extra.css"
-  "${SPHINX_BUILD}/static/css/extra.css"
-  @ONLY)
-
-add_custom_target(server_rst python gen_server_doc.py)  
-
 add_custom_target(docs
               gendoc
-              COMMAND python gen_server_doc.py
               COMMAND ${DOXYGEN_EXECUTABLE} ${DOXYGEN_OUT}
               COMMAND ${SPHINX_EXECUTABLE} -a -b html
               -Dbreathe_projects.slsDetectorPackage=${CMAKE_CURRENT_BINARY_DIR}/xml
@@ -93,11 +66,4 @@ add_custom_target(docs
               ${SPHINX_BUILD}/html
               COMMENT "Generating documentation with Sphinx")
 
-add_custom_target(rst
-              COMMAND ${SPHINX_EXECUTABLE} -a -b html
-              -Dbreathe_projects.slsDetectorPackage=${CMAKE_CURRENT_BINARY_DIR}/xml
-              -c "${SPHINX_BUILD}"
-              ${SPHINX_BUILD}/src 
-              ${SPHINX_BUILD}/html
-              COMMENT "Generating documentation with Sphinx")
 

docs/conf.py.in

@@ -21,7 +21,7 @@ print(sys.path)
 # -- Project information -----------------------------------------------------
 
 project = 'slsDetectorPackage'
-copyright = '2020, PSD Detector Group'
+copyright = '2019, PSD Detector Group'
 author = 'PSD Detector Group'
 version = '@PROJECT_VERSION@'
 
@@ -59,8 +59,4 @@ html_theme = "sphinx_rtd_theme"
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
-html_static_path = ['static']
-
-
-def setup(app):
-    app.add_stylesheet('css/extra.css')  # may also be an URL
+#html_static_path = ['_static']

docs/gen_server_doc.py.in

@@ -1,86 +0,0 @@
-import os 
-import re
-from pathlib import Path
-def remove_comments(text):
-    def replacer(match):
-        s = match.group(0)
-        if s.startswith('/'):
-            return " " # note: a space and not an empty string
-        else:
-            return s
-    pattern = re.compile(
-        r'//.*?$|/\*.*?\*/|\'(?:\\.|[^\\\'])*\'|"(?:\\.|[^\\"])*"',
-        re.DOTALL | re.MULTILINE
-    )
-    return re.sub(pattern, replacer, text)
-
-
-# @CMAKE_CURRENT_BINARY_DIR@
-
-print('\n\n\n\n SERVER CSV')
-
-src = Path('@CMAKE_SOURCE_DIR@')/'slsDetectorServers/'
-detectors = ['Mythen3', 'Gotthard2', 'Eiger', 
-            'Jungfrau', 'Moench', 'Gotthard', 'Ctb']
-
-
-for det in detectors:
-    print(det)
-    in_fname = src/f'{det.lower()}DetectorServer/slsDetectorServer_defs.h'
-    #print(f'Reading: {in_fname}')
-    with open(in_fname) as f:
-        lines = f.read().replace('\\\n', '')
-        lines = lines.splitlines(keepends = True)
-
-    lines = [l.strip('#define').strip(' ') for l in lines if l.startswith('#define')]
-    output = []
-    signals = []
-    fields = ['Name,', 'Value', 'Comment']
-    excluded = ['DAC_NAMES', 'DEFAULT_DAC_VALS', 'CLK_NAMES', 'ONCHIP_DAC_NAMES']
-    header = f'{fields[0]:35}{fields[1]:35}\n'
-    output.append(header)
-    signals.append(header)
-    dac_names = []
-    dac_values = []
-    for line in lines:
-        name, *parts = line.split()
-        arg = ' '.join(parts)
-        value, *comments = arg.split('//') 
-        value = value.strip('() ')
-        # value = value.replace(', ', ' ')
-        value = value.replace('\"', '')
-        if name not in excluded:
-            name += ','
-            if name.startswith('SIGNAL_'):
-                signals.append(f'{name:35}{value}\n')
-            else:
-                output.append(f'{name:35}\"{value}\"\n')
-        elif name == 'DAC_NAMES':
-            dac_names = [v.strip(', ') for v in value.split()]
-            dac_names = [n+',' for n in dac_names]
-        elif name == 'DEFAULT_DAC_VALS':
-            dac_values = remove_comments(value).strip('{}; ')
-            dac_values = dac_values.replace(',', '').split()
-            dac_values = [v.strip('') for v in dac_values]
-
-    print(f"dac_names: {len(dac_names)}, dac_values={len(dac_values)}")
-    if len(dac_values) == 0:
-        dac_values = ['N/A']*len(dac_names)
-
-    
-
-    rstpath = Path('@CMAKE_SOURCE_DIR@')/'docs/src/'
-
-    out_fname = Path.cwd()/f'src/{det.lower()}.csv'
-    out_dac_fname = Path.cwd()/f'src/{det.lower()}-dacs.csv'
-    #print(f'Writing: {out_fname}')
-    with open(out_fname, 'w') as f:
-        f.writelines(output)
-
-    output = [f'{n:35}{v}\n' for n,v in zip(dac_names, dac_values)]
-    output.insert(0, header)
-
-    with open(out_dac_fname, 'w') as f:
-        f.writelines(output)
-
-print('END\n\n\n\n')

docs/src/commandline.rst

@@ -4,44 +4,13 @@ Command line interface
 Usage
 -------------
 
-Commands can be used either with sls_detector_get or sls_detector_put
+Commands can be uses either with sls_detector_get or sls_detector_put
 
 .. code-block::
 
     sls_detector_get vrf
 
-Help
---------
-
-.. code-block::
-
-    # get list of commands
-    sls_detector_get list
-
-    # search for a particular command using a word
-    sls_detector_get list | grep adc
-
-    # get help for a particular command
-    sls_detector_get -h fpath
-    sls_detector_help fpath
-  
-
 Commands
 -----------
 
 .. include:: ../commands.rst
-
-
-Depreciated commands
-------------------------
-
-.. note ::
-	All the dac commands are preceded with the **dac** command. Use command **daclist** to get correct list of dac command arguments for current detector.
-
-.. csv-table:: Depreciated commands
-   :file: ../depreciated.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-
-

docs/src/consuming.rst

@@ -6,10 +6,10 @@ slsDetectorPackage there are a few different ways to
 consume our package. The recommended way is to use one of the 
 CMake approaches. 
 
-One can test with :ref:`detector simulators<Virtual Detector Servers>` before testing the API with a real detector or when a real detector is not at hand.
+
 
 CMake: slsDetectorPackage as submodule in your project
----------------------------------------------------------------
+---------------------------------------
 
 If you are using CMake to build your integration and want to build everything
 in one go, we support adding slsDetectorPackage as a subfolder in your cmake project. 
@@ -19,7 +19,7 @@ A minimal CMakeLists.txt could look like this:
 .. code-block:: cmake
 
     project(myDetectorIntegration)
-    cmake_minimum_required(VERSION 3.14)
+    cmake_minimum_required(VERSION 3.12)
     add_subdirectory(slsDetectorPackage)
 
     #Add your executable
@@ -43,7 +43,7 @@ should be needed, otherwise specify cmake prefix path.
 
 .. code-block:: cmake 
 
-    cmake_minimum_required(VERSION 3.14)
+    cmake_minimum_required(VERSION 3.12)
     project(myintegration)
 
     find_package(slsDetectorPackage 5.0 REQUIRED)
@@ -91,7 +91,7 @@ manually when invoking g++. This can sometimes be handy for a quick try.
 
 .. code-block:: cpp
 
-    #include "sls/Detector.h"
+    #include "Detector.h"
     #include <iostream>
     int main(){
 

docs/src/dependencies.rst

@@ -13,42 +13,26 @@ To use the basic building blocks, meaning sls_detector_get/put and
 the shared libraries these are needed: 
 
  * Linux, preferably recent kernel (currently no cross platform support)
- * CMake >= 3.14 
+ * CMake > 3.12 
  * C++11 compatible compiler. (We test with gcc and clang)
+ * ZeroMQ version 4
+
+-----------------------
+GUI
+-----------------------
+
+The GUI is currently using Qt4 but watch out for an upgrade to 5. 
+
+ * Qt 4.8
+ * Qwt 6.1
 
 -----------------------
 Python bindings
 -----------------------
 
  * Python > 3.6
- * pybind11 2.11.0 (packaged in libs)
+ * pybind11 (packaged in libs/)
 
-.. note ::  
-
-    Refer :ref:`pybind11 notes. <pybind for different slsDetectorPackage versions>`  
-
------------------------
-ZeroMQ
------------------------
-
- * Zeromq 4.3.4 (packaged in libs)
-
-.. note ::   
-
-    Refer :ref:`zeromq notes. <zeromq for different slsDetectorPackage versions>` 
-
------------------------
-GUI
------------------------
-
- * Qt 5.9
- * Qwt 6.1.5 (packaged in libs)
-
------------------------
-Moench executables
------------------------
-
- * libtiff
 
 -----------------------
 Documentation
@@ -58,7 +42,7 @@ The documentation that you are reading now is built with
 
  * Doxygen (to extract C++ classes etc.)
  * Breathe (Sphinx plugin to handle doxygen xml)
- * Sphinx with sphinx_rtd_theme 
+ * Sphinx 
 
 -----------------------
 Packaged in libs/
@@ -67,5 +51,3 @@ Packaged in libs/
  * catch2 (unit testing)
  * rapidjson (streaming from receiver)
  * pybind11 (python bindings)  
- * qwt (gui plotting)
- * libzmq (streaming to/from receiver)

docs/src/detector.rst

@@ -1,19 +1,16 @@
 Detector
 ==============================================
 
-The sls::Detector is the public API to control 
+The sls::Detector is the new public API to control 
 detectors from C++. This API is also used internally
 for the Python bindings and the command line interface. 
-If a receiver has been configured, this is also controlled
+If a receiver has been configured this is also controlled
 through this class.
 
 Most, if not all, functions are called in parallel
 and the return value is a thin std::vector wrapper 
-containing results from all modules. (:ref:`Result class<Result Class>`)
+containing results from all modules. (Result<T>)
 
-Here are some :ref:`examples <Cplusplus Api Examples>` on how to use the API.
-
-.. _Cplusplus Api Examples:
 .. doxygenclass:: sls::Detector
    :members:
    :undoc-members:

docs/src/examples.rst

@@ -1,4 +1,3 @@
-.. _Cplusplus Api Examples:
 
 
 
@@ -37,7 +36,7 @@ Running a config file [e1]
 
 .. code-block:: cpp
 
-    #include "sls/Detector.h"
+    #include "Detector.h"
     ...
     sls::Detector det;
     det.loadConfig("path/to/config/file.config");
@@ -54,8 +53,8 @@ then set up the detector.
 
     jungfrauDetectorServer_virtual
 
-This launches a virtual Jungfrau detector server. As default it uses port 1952 and 1953
-for communication over TCP. Most commands go on 1952 and only a few such as stop and status on 1953. 
+This launches a virtual Jungfrau detector server. As default is uses port 1952 and 1953
+for communication over TCP. Most commands go on 1952 and only stop and status on 1953. 
 
 **Run example to configure**
 
@@ -91,10 +90,7 @@ std::vector.
     sls::Result<int> res1{1, 1, 1};
     std::cout << "res1: " << res1 << '\n';
     res1.squash();
-    # return -1 if different
     res1.squash(-1);
-    # throw exception with custom message if different
-    res1.tsquash("Values are different);
 
 
 
@@ -109,7 +105,7 @@ as converting to floating point.
 
 .. code-block:: cpp
 
-    #include "sls/Detector.h"
+    #include "Detector.h"
     #include <chrono>
     ...
     std::chrono::microseconds t0{500};

docs/src/firmware.rst

@@ -1,402 +0,0 @@
-Firmware Upgrade
-=================
-
-Eiger
--------------
-
-Download 
-^^^^^^^^^^^^^
-- `bcp script <https://github.com/slsdetectorgroup/slsDetectorFirmware/blob/master/binaries/eiger/bcp>`__
-
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `bit files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-Upgrade
-^^^^^^^^
-#. Tftp must be already installed on your pc to use the bcp script.
-
-#. Copy new servers to the board. See :ref:`how to upgrade detector servers<Detector Server Upgrade>` for more detals. A reboot should have started the new linked servers automatically. For Eiger, do not reboot yet as we need to program the firmware via bit files.
-
-    * This step is crucial when registers between firmwares change. Failure to do so will result in linux on boards to crash and boards can't be pinged anymore.
-
-#. Bring the board into programmable mode using either of the 2 ways. Both methods result in only the central LED blinking.
-    
-    * **Manual:**
-    
-        Do a hard reset for each half module on back panel boards, between the LEDs, closer to each of the 1G ethernet connectors. Push until all LEDs start to blink.
-    
-    * Software:  
-
-        .. code-block:: bash
-
-            # Option 1: if the old server is still running:
-            sls_detector_put execcommand "./boot_recovery"
-
-            # Option 2:
-            ssh root@bebxxx
-            cd executables
-            ./boot_recovery
-
-#. Start a terminal for each half module and run the following to see progress.
-
-    .. code-block:: bash
-    
-    	nc -p 3000 -u bebxxx 3000
-        # Press enter twice to see prompt with board name.
-        > bebxxx
-        # After each bcp command, wait for this terminal to print "Success".
-
-
-#. In another terminal, run the following to update firmware. Please update bit files with great caution as it could make your board inaccessible, if done incorrectly.
-
-    .. code-block:: bash
-    
-        #update back end fpga
-        bcp download.bit bebxxx:/fw0
-
-        #update front left fpga
-        bcp download.bit bebxxx:/febl
-
-        #update front right fpga
-        bcp download.bit bebxxx:/febr
-
-        #update kernel (only if required by us)
-        bcp download.bit bebxxx:/kernel
-
-#. Reboot the detector.
-
-    .. code-block:: bash
-
-        # In the first terminal where we saw "Succeess"
-        # reconfig febX is necessary only if you have flashed a new feb firmware
-        reconfig febl
-        reconfig febr
-        # will reboot controller
-        reconfig fw0
-
-.. note :: 
-
-    If the detector servers did not start up automatically after reboot, you need to add scripts to do that. See :ref:`Automatic start<Automatic start servers>` for more details.
-
-Jungfrau
--------------
-
-Download 
-^^^^^^^^^^^^^
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `pof files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-
-Upgrade
-^^^^^^^^
-
-.. warning ::
-
-    In case you have had issues in the past with programming via software:
-
-    * 6.1.2 server has a fix for seamless fpga programming
-
-    * We recommend first updating the on-board detector server to 6.1.2 (with client 6.1.x) using command 'updatedetectorserver' or 'copydetectorserver'.
-
-    * Then use command 'programfpga' to only update firmware or use command 'update' to update firmware and server to the latest release.
-
-
-
-Check :ref:`firmware troubleshooting <blackfin firmware troubleshooting>` if you run into issues while programming firmware.
-
-
-
-
-Program from console
-    .. code-block:: bash
-
-        # These instructions are for upgrades from v5.0.0. For earlier versions, please contact us.
-
-        # Always ensure that the client and server software are of the same release.
-
-        # copies server, links new server to jungfrauDetectorServer, 
-        # removes old server from respawn, sets up new lnked server to respawn
-        # programs fpga, reboots
-
-        #  older versions: v5.0.0 - 6.0.0 using tftp from tftp folder of pc
-        sls_detector_put update jungfrauDetectorServervxxx pcxxx xx.pof
-
-        # v6.1.1 - present (copies server from the full path provided)
-        sls_detector_put update jungfrauDetectorServervxxx xx.pof
-
-        # Or only program firmware
-        sls_detector_put programfpga xxx.pof
-
-
-
-Gotthard I
------------
-
-Download 
-^^^^^^^^^^^^^
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `pof files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-
-.. _firmware upgrade using blaster for blackfin:
-
-Upgrade
-^^^^^^^^
-.. warning ::
-    | Gotthard firmware cannot be upgraded remotely and requires the use of USB-Blaster.
-    | It is generally updated by us.
-
-#. Download `Altera Quartus software or Quartus programmer <https://fpgasoftware.intel.com/20.1/?edition=standard&platform=linux&product=qprogrammer#tabs-4>`__.
-   
-
-#. Start Quartus programmer, click on Hardware Setup. In the "Currently selected hardware" window, select USB-Blaster.
-
-#. In the Mode combo box, select "Active Serial Programming".
-
-#. Plug the end of your USB-Blaster with the adaptor provided to the connector 'AS config' on the Gotthard board.
-
-#. Click on 'Add file'. Select programming (pof) file provided by us.
-
-#. Check "Program/Configure" and "Verify". Push the start button. Wait until the programming process is finished.
-
-#. In case of error messages, check the polarity of cable (that pin1 corresponds) and that the correct programming connector is selected.
-
-#. Reboot the detector.
-
-
-Mythen III
------------
-
-Download 
-^^^^^^^^^^^^^
-
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `rbf files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-
-Upgrade
-^^^^^^^^
-
-Program from console
-    .. code-block:: bash
-
-        # Always ensure that the client and server software are of the same release.
-
-        # copies server, links new server to mythen3DetectorServer, 
-        # removes old server from respawn, sets up new lnked server to respawn
-        # programs fpga, reboots
-
-        #  older versions: v5.0.0 - 6.0.0 using tftp from tftp folder of pc
-        sls_detector_put update mythen3DetectorServervxxx pcxxx xxx.rbf
-
-        # v6.1.1 - present (copies server from the full path provided)
-        sls_detector_put update mythen3DetectorServervxxx xxx.rbf
-
-        # Or only program firmware
-        sls_detector_put programfpga xxx.rbf
-
-.. note :: 
-
-    If the detector servers did not start up automatically after reboot, you need to add scripts to do that. See :ref:`Automatic start<Automatic start servers>` for more details.
-
-Gotthard II
--------------
-
-Download 
-^^^^^^^^^^^^^
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `rbf files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-Upgrade
-^^^^^^^^
-
-Program from console
-    .. code-block:: bash
-
-        # Always ensure that the client and server software are of the same release.
-        
-        # copies server, links new server to gotthard2DetectorServer, 
-        # removes old server from respawn, sets up new lnked server to respawn
-        # programs fpga, reboots
-
-        #  older versions: v5.0.0 - 6.0.0 using tftp from tftp folder of pc
-        sls_detector_put update gotthard2DetectorServervxxx pcxxx xxx.rbf
-
-        # v6.1.1 - present (copies server from the full path provided)
-        sls_detector_put update gotthard2DetectorServervxxx xxx.rbf
-
-        # Or only program firmware
-        sls_detector_put programfpga xxx.rbf
-
-.. note :: 
-
-    If the detector servers did not start up automatically after reboot, you need to add scripts to do that. See :ref:`Automatic start<Automatic start servers>` for more details.
-
-Moench
--------
-
-Download 
-^^^^^^^^^^^^^
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `pof files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-
-
-Upgrade
-^^^^^^^^
-
-.. warning ::
-
-    In case you have had issues in the past with programming via software:
-
-    * 6.1.2 server has a fix for seamless fpga programming
-
-    * We recommend first updating the on-board detector server to 6.1.2 (with client 6.1.x) using command 'updatedetectorserver' or 'copydetectorserver'.
-
-    * Then use command 'programfpga' to only update firmware or use command 'update' to update firmware and server to the latest release.
-
-
-
-Check :ref:`firmware troubleshooting <blackfin firmware troubleshooting>` if you run into issues while programming firmware.
-
-
-Program from console
-    .. code-block:: bash
-
-        # Always ensure that the client and server software are of the same release.
-
-        # copies server, links new server to moenchDetectorServer, 
-        # removes old server from respawn, sets up new lnked server to respawn
-        # programs fpga, reboots
-
-        #  older versions: v5.0.0 - 6.0.0 using tftp from tftp folder of pc
-        sls_detector_put update moenchDetectorServervxxx pcxxx xx.pof
-
-        # v6.1.1 - present (copies server from the full path provided)
-        sls_detector_put update moenchDetectorServervxxx xx.pof
-
-        # Or only program firmware
-        sls_detector_put programfpga xxx.pof
-
-Ctb
-----
-
-Download 
-^^^^^^^^^^^^^
-- detector server corresponding to package in slsDetectorPackage/serverBin
-
-- `pof files <https://github.com/slsdetectorgroup/slsDetectorFirmware>`__
-
-
-
-Upgrade
-^^^^^^^^
-
-Check :ref:`firmware troubleshooting <blackfin firmware troubleshooting>` if you run into issues while programming firmware.
-
-
-Program from console
-    .. code-block:: bash
-
-        # Always ensure that the client and server software are of the same release.
-        
-        # copies server, links new server to ctbDetectorServer, 
-        # removes old server from respawn, sets up new lnked server to respawn
-        # programs fpga, reboots
-
-        #  older versions: v5.0.0 - 6.0.0 using tftp from tftp folder of pc
-        sls_detector_put update ctbDetectorServervxxx pcxxx xx.pof
-
-        # v6.1.1 - present (copies server from the full path provided)
-        sls_detector_put update ctbDetectorServervxxx xx.pof
-
-        # Or only program firmware
-        sls_detector_put programfpga xxx.pof
-
-
-.. _blackfin firmware troubleshooting:
-
-Firmware Troubleshooting with blackfin
-----------------------------------------
-
-1. v4.x.x client after programming will most likely reboot the blackfin processor, regardless of error.
-
-2. v5.x.x-rcx client after programming will not reboot the blackfin processor, if error occurred.
-
-3. If a reboot occured with an incomplete firmware in flash, the blackfin will most likely not find the mtd3 drive. To see if this drive exists:
-
-  .. code-block:: bash
-    
-    # connect to the board
-    telnet bchipxxx
-
-    # view of mtd3 existing
-    root:/> more /proc/mtd
-    dev:    size   erasesize  name
-    mtd0: 00040000 00020000 "bootloader(nor)"
-    mtd1: 00100000 00020000 "linux kernel(nor)"
-    mtd2: 002c0000 00020000 "file system(nor)"
-    mtd3: 01000000 00010000 "bitfile(spi)"
-
-4. If one can see the mtd3 drive, one can already try to flash again using the **programfpga** command (without rebooting blackfin or detector). 
-
-5. If one can't list it, read the next section to try to get the blackfin to list it.
-
-How to get back mtd3 drive remotely (udpating kernel)
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-    You have 2 alternatives to update the kernel.
-
-    1. Commands via software (>= v6.0.0)
-
-        .. code-block:: bash
-
-            sls_detector_put updatekernel /home/...path-to-kernel-image
-
-
-    2. or command line 
-    
-        .. code-block:: bash
-            
-            # step 1: get the kernel image (uImage.lzma) from slsdetectorgroup
-            # and copy it to pc's tftp folder
-
-            # step 2: connect to the board
-            telnet bchipxxx
-
-            #step 3: go to directory for space
-            cd /var/tmp/
-
-            # step 3: copy kernel to board
-            tftp pcxxx -r uImage.lzma -g
-
-            # step 4: verify kernel copied properly
-            ls -lrt
-            
-            # step 5: erase flash
-            flash_eraseall /dev/mtd1
-            
-            # step 6: copy new image to kernel drive
-            cat uImage.lzma > /dev/mtd1
-            
-            # step 7:
-            sync
-            
-            # step 8:
-            reboot
-            
-            # step 9: verification
-            telnet bchipxxx
-            uname -a # verify kernel date
-            more /proc/mtd # verify mtd3 is listed
-            
-
-Last Resort using USB Blaster
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-If none of these steps work, the last resort might be physically upgrading the firmware using a USB blaster, which also requires opening up the detector. Instructions for all the blackfin detectors are the same as the one for :ref:`gotthard firmware upgrade <firmware upgrade using blaster for blackfin>`.

docs/src/gendoc.cpp

@@ -1,5 +1,3 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 /** 
  * Utility program to generate input files for the command line 
  * documentation. Uses the string returned from sls_detector_help cmd
@@ -11,9 +9,10 @@
 #include <string>
 #include <vector>
 
+
 #include "CmdProxy.h"
-#include "sls/Detector.h"
-#include "sls/sls_detector_defs.h"
+#include "Detector.h"
+#include "sls_detector_defs.h"
 
 std::string replace_all(const std::string &src, const std::string &from,
                         const std::string &to) {
@@ -45,20 +44,13 @@ int main() {
 
     for (const auto &cmd : commands) {
         std::ostringstream os;
-        std::cout << cmd << '\n';
         proxy.Call(cmd, {}, -1, slsDetectorDefs::HELP_ACTION, os);
 
         auto tmp = os.str().erase(0, cmd.size());
         auto usage = tmp.substr(0, tmp.find_first_of('\n'));
         tmp.erase(0, usage.size());
-        auto help = replace_all(tmp, "\n\t", "\n\t\t| ");
+        auto help = replace_all(tmp, "\n\t", "\n\t\t");
         fs << '\t' << cmd << usage << help << "\n";
     }
 
-    std::ofstream fs2("depreciated.csv");
-    fs2 << "Old, New\n";
-    auto cmds = proxy.GetDepreciatedCommands();
-    for (auto it : cmds) {
-        fs2 << it.first << ", " << it.second << '\n';
-    }
 }

docs/src/index.rst

@@ -8,8 +8,8 @@ Welcome to slsDetectorPackage's documentation!
 
 .. note :: 
 
-    This is the documentation for the latest development version of slsDetectorPackage.
-    For further documentation, visit the official page: https://www.psi.ch/en/detectors/documentation
+    This is the documentation for the latest development version of slsDetectorPackage
+    For documentation on current and previous releases visit the official page: https://www.psi.ch/en/detectors/documentation
 
 .. toctree::
     :maxdepth: 1
@@ -25,14 +25,13 @@ Welcome to slsDetectorPackage's documentation!
 
     detector
     result
-    receiver_api
+    receiver
     examples
 
 .. toctree::
     :caption: Python API
     :maxdepth: 2
 
-    pygettingstarted
     pydetector
     pyenums
     pyexamples
@@ -42,7 +41,6 @@ Welcome to slsDetectorPackage's documentation!
     :maxdepth: 2
 
     commandline  
-    quick_start_guide
 
 .. toctree::
     :caption: Developer
@@ -51,43 +49,6 @@ Welcome to slsDetectorPackage's documentation!
     type_traits
     ToString
 
-.. toctree::
-    :caption: Firmware
-    :maxdepth: 2
-
-    firmware 
-
-.. toctree::
-    :caption: Detector Server
-    :maxdepth: 2
-
-    servers
-    serverupgrade
-    virtualserver
-    serverdefaults
-
-
-.. toctree::
-    :caption: Detector UDP Header
-    :maxdepth: 2
-
-    udpheader
-    udpconfig
-    udpdetspec
-
-.. toctree::
-    :caption: Receiver
-    :maxdepth: 2
-
-    receivers
-    slsreceiver
-
-.. toctree::
-    :caption: Troubleshooting
-
-    troubleshooting
-
-
 .. Indices and tables
 .. ==================
 

docs/src/installation.rst

@@ -1,28 +1,28 @@
-.. warning ::
-    
-    Before building from source make sure that you have the 
-    :doc:`dependencies <../dependencies>` installed. If installing using conda, conda will 
-    manage the dependencies. Avoid also installing packages with pip. 
-   
-
-.. _Installation:
-
 
 Installation
-===============
+==============================================
+
+Build from source using CMake
+---------------------------------
+
+.. note :: 
+
+    The default branch of our git repository is developer. It contains the 
+    latest development version. It is expected to compile and work but 
+    features might be added or tweaked. In some cases the API might also change
+    without being communicated. If absolute stability of the API is needed please
+    use one of the release versions. 
+
+.. code-block:: bash
+
+    git clone https://github.com/slsdetectorgroup/slsDetectorPackage.git
+    mkdir build && cd build
+    cmake ../slsDetectorPackage -DCMAKE_INSTALL_PREFIX=/your/install/path
+    make -j12
+    make install
 
 Install binaries using conda
--------------------------------
-
-Conda is not only useful to manage python environments but can also
-be used as a user space package manager. Dates in the tag (for eg. 2020.07.23.dev0) 
-are from the developer branch. Please use released tags for stability.
-
-We have three different packages available:
-
-    * **slsdetlib** shared libraries and command line utilities 
-    * **slsdetgui** GUI
-    * **slsdet** Python bindings
+--------------------------------
 
 .. code-block:: bash
 
@@ -31,149 +31,18 @@ We have three different packages available:
     conda config --add channels slsdetectorgroup
     conda config --set channel_priority strict
 
-    #create and activate an environment with our library
-    #replace 6.1.1 with the required tag
-    conda create -n myenv slsdetlib=6.1.1
-    conda activate myenv
+    #cerate an environment with our library, then activate
+    conda create -n myenv slsdetlib=2020.03.18.dev2
+    codna activate myenv
 
     #ready to use
     sls_detector_get exptime
     etc ...
 
 
-.. code-block:: bash
 
-    #List available versions
-    # lib and binaries
-    conda search slsdetlib
-    # python
-    conda search slsdet
-    # gui
-    conda search slsdetgui
-
-
-
-
-Build from source
--------------------
-
-1. Download Source Code from github
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-.. code-block:: bash
-
-    git clone https://github.com/slsdetectorgroup/slsDetectorPackage.git --branch 6.1.1
-
-.. note ::   
-
-      For v6.x.x of slsDetectorPackage and older, refer :ref:`pybind11 notes on cloning. <pybind for different slsDetectorPackage versions>`  
-
-.. _build from source using cmake:
-
-
-
-2. Build from Source
-^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Build using CMake
-^^^^^^^^^^^^^^^^^^^^^^
-
-.. code-block:: bash
-
-    # outside slsDetecorPackage folder
-    mkdir build && cd build
-
-    # configure & generate Makefiles using cmake
-    # by listing all your options (alternately use ccmake described below)
-    # cmake3 for some systems
-    cmake ../slsDetectorPackage -DCMAKE_INSTALL_PREFIX=/your/install/path
-
-    # compiled to the build/bin directory
-    make -j12 #or whatever number of cores you are using to build
-
-    # install headers and libs in /your/install/path directory
-    make install
-
-
-Instead of the cmake command, one can use ccmake to get a list of options to configure and generate Makefiles at ease.
-
-.. code-block:: bash
-
-    # ccmake3 for some systems
-    ccmake ..
- 
-    # choose the options
-    # first press [c] - configure (maybe multiple times till you see [g])
-    # then press [g] - generate
-
-
-===============================     ===============================
-Example cmake options               Comment
-===============================     ===============================
--DSLS_USE_PYTHON=ON                 Python
--DPython_FIND_VIRTUALENV=ONLY       Python from the conda env 
--DSLS_USE_GUI=ON                    GUI
--DSLS_USE_HDF5=ON                   HDF5
--DSLS_USE_SIMULATOR=ON              Simulator
-===============================     ===============================
-
-.. note ::   
-
-    For v7.x.x of slsDetectorPackage and older, refer :ref:`zeromq notes for cmake option to hint library location. <zeromq for different slsDetectorPackage versions>` 
-
-
-Build using in-built cmk.sh script
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-
-.. code-block:: bash
-
-    The binaries are generated in slsDetectorPackage/build/bin directory.
-
-    Usage: $0 [-b] [-c] [-d <HDF5 directory>] [-e] [-g] [-h] [-i] 
-    [-j <Number of threads>] [-k <CMake command>] [-l <Install directory>] 
-    [-m] [-n] [-p] [-r] [-s] [-t] [-u] [-z]  
-    -[no option]: only make
-    -b: Builds/Rebuilds CMake files normal mode
-    -c: Clean
-    -d: HDF5 Custom Directory
-    -e: Debug mode
-    -g: Build/Rebuilds gui
-    -h: Builds/Rebuilds Cmake files with HDF5 package
-    -i: Builds tests
-    -j: Number of threads to compile through
-    -k: CMake command
-    -l: Install directory
-    -m: Manuals
-    -n: Manuals without compiling doxygen (only rst)
-    -p: Builds/Rebuilds Python API
-    -r: Build/Rebuilds only receiver
-    -s: Simulator
-    -t: Build/Rebuilds only text client
-    -u: Chip Test Gui
-    -z: Moench zmq processor
-
-    
-    # display all options
-    ./cmk.sh -?
-
-    # new build and compile in parallel (recommended basic option):
-    ./cmk.sh -cbj5
-
-    # new build, python and compile in parallel:
-    ./cmk.sh -cbpj5
-
-    #For rebuilding only certain sections
-    ./cmk.sh -tg #only text client and gui
-    ./cmk.sh -r #only receiver
-
-.. note ::   
-
-    For v7.x.x of slsDetectorPackage and older, refer :ref:`zeromq notes for cmk script option to hint library location. <zeromq for different slsDetectorPackage versions>` 
-
-
-Build on old distributions
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Build from source on old distributions
+-----------------------------------------
 
 If your linux distribution doesn't come with a C++11 compiler (gcc>4.8) then 
 it's possible to install a newer gcc using conda and build the slsDetectorPackage
@@ -182,74 +51,14 @@ using this compiler
 .. code-block:: bash
 
     #Create an environment with the dependencies
-    conda create -n myenv gxx_linux-64 cmake
+    conda create -n myenv gxx_linux-64 cmake zmq
     conda activate myenv
-
-    # outside slsDetecorPackage folder
-    mkdir build && cd build
     cmake ../slsDetectorPackage -DCMAKE_PREFIX_PATH=$CONDA_PREFIX
     make -j12
 
 
-.. note ::   
-
-    For v7.x.x of slsDetectorPackage and older, refer :ref:`zeromq notes for dependencies for conda. <zeromq for different slsDetectorPackage versions>` 
-
-
-
-Build slsDetectorGui (Qt5)
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-1. Using pre-built binary on conda
-    .. code-block:: bash
-
-        conda create -n myenv slsdetgui=7.0.0
-        conda activate myenv
-
-
-2. Using system installation on RHEL7
-    .. code-block:: bash
-
-        yum install qt5-qtbase-devel.x86_64
-        yum install qt5-qtsvg-devel.x86_64 
-
-
-3. Using conda
-    .. code-block:: bash
-
-        #Add channels for dependencies and our library
-        conda config --add channels conda-forge
-        conda config --add channels slsdetectorgroup
-        conda config --set channel_priority strict
-
-        # create environment to compile
-        # on rhel7
-        conda create -n slsgui gxx_linux-64 gxx_linux-64 mesa-libgl-devel-cos6-x86_64 qt
-        # on fedora or newer systems
-        conda create -n slsgui qt
-
-        # when using conda compilers, would also need libgl, but no need for it on fedora unless maybe using it with ROOT
-
-        # activate environment
-        conda activate slsgui
-
-        # compile with cmake outside slsDetecorPackage folder
-        mkdir build && cd build
-        cmake ../slsDetectorPackage -DSLS_USE_GUI=ON
-        make -j12
-
-        # or compile with cmk.sh
-        cd slsDetectorPackage
-        ./cmk.sh -cbgj9
-
-.. note ::   
-
-    For v7.x.x of slsDetectorPackage and older, refer :ref:`zeromq notes for dependencies for conda. <zeromq for different slsDetectorPackage versions>` 
-
-
-
 Build this documentation
-^^^^^^^^^^^^^^^^^^^^^^^^
+-------------------------------
 
 The documentation for the slsDetectorPackage is build using a combination 
 of Doxygen, Sphinx and Breathe. The easiest way to install the dependencies
@@ -257,63 +66,4 @@ is to use conda
 
 .. code-block:: bash
 
-    conda create -n myenv python=3.12 sphinx sphinx_rtd_theme breathe doxygen numpy
-
-
-.. code-block:: bash
-
-    # using cmake or ccmake to enable DSLS_BUILD_DOCS
-    # outside slsDetecorPackage folder
-    mkdir build && cd build
-    cmake ../slsDetectorPackage -DSLS_BUILD_DOCS=ON
-
-    make docs # generate API docs and build Sphinx RST
-    make rst # rst only, saves time in case the API did not change
-
-
-Pybind and Zeromq
-^^^^^^^^^^^^^^^^^^^
-
-.. _pybind for different slsDetectorPackage versions:
-
-
-| **Pybind for Python**
-| v8.0.0+:
-|   pybind11 (v2.11.0) is built 
-|   * by default from tar file in repo (libs/pybind/v2.11.0.tar.gz) 
-|   * or use advanced option SLS_FETCH_PYBIND11_FROM_GITHUB [`link <https://github.com/pybind/pybind11>`__].
-|
-| v7.x.x:
-|   pybind11 packaged into 'libs/pybind'. No longer a submodule. No need for "recursive" or "submodule update".
-| 
-| Older versions:
-|   pybind11 is a submodule. Must be cloned using "recursive" and updated when switching between versions using the following commands.
-
-.. code-block:: bash
-
-    # Note: Only for v6.x.x versions and older
-
-    # clone using recursive to get pybind11 submodule
-    git clone --recursive https://github.com/slsdetectorgroup/slsDetectorPackage.git
-
-    # update submodule when switching between releases
-    cd slsDetectorPackage
-    git submodule update --init
-
-
-.. _zeromq for different slsDetectorPackage versions:
-
-
-
-| **Zeromq**
-| v8.0.0+:
-|   zeromq (v4.3.4) is built 
-|   * by default from tar file in repo (libs/libzmq/libzmq-4.3.4.tar.gz) 
-|   * or use advanced option SLS_FETCH_ZMQ_FROM_GITHUB [`link <https://github.com/zeromq/libzmq.git>`__].
-|
-| v7.x.x and older:
-|   zeromq must be installed and one can hint its location using
-|   * cmake option:'-DZeroMQ_HINT=/usr/lib64' or 
-|   * option '-q' in cmk.sh script: : ./cmk.sh -cbj5 -q /usr/lib64
-|   * 'zeromq' dependency added when installing using conda
-
+    conda create -n myenv python sphinx sphinx_rtd_theme

docs/src/pydetector.rst

@@ -7,4 +7,3 @@ Detector
     :members:  
     :undoc-members:
     :show-inheritance:
-    :inherited-members:

docs/src/pyenums.rst

@@ -4,86 +4,9 @@ Enums
 These enums are defined in slsDetectorDefs in the C++ package and 
 exposed to Python through pybind11.
 
-
-::  
-
-    # Most settings are represented as enums that can be 
-    # explicitly imported
-
-    from slsdet import Detector, fileFormat
-    d = Detector()
-    d.fformat = fileFormat.BINARY
-
-    # Altough not recommended for convenience all enums 
-    # and some other things can be impored using *
-
-    from slsdet import *
-    d.speed = speedLevel.FULL_SPEED 
-
-    # To list the available enums, use dir()
-
-    import slsdet.enums
-    for enum in dir(slsdet.enums):
-        # filter out special memebers
-        if not enum.startswith('_'):
-            print(enum)
-
-
-.. py:currentmodule:: slsdet
+.. py:currentmodule:: sls_detector
 
 .. autoclass:: runStatus
+    :members:  
     :undoc-members:
-
-.. autoclass:: detectorType
-    :undoc-members:
-
-.. autoclass:: frameDiscardPolicy
-    :undoc-members:
-
-.. autoclass:: fileFormat
-    :undoc-members:
-
-.. autoclass:: dimension
-    :undoc-members:
-
-.. autoclass:: externalSignalFlag
-    :undoc-members:
-
-.. autoclass:: timingMode
-    :undoc-members:
-
-.. autoclass:: dacIndex
-    :undoc-members:
-
-.. autoclass:: detectorSettings
-    :undoc-members:
-
-.. autoclass:: clockIndex
-    :undoc-members:
-
-.. autoclass:: speedLevel
-    :undoc-members:
-
-.. autoclass:: readoutMode
-    :undoc-members:
-
-.. autoclass:: burstMode
-    :undoc-members:
-
-.. autoclass:: timingSourceType
-    :undoc-members:
-
-.. autoclass:: M3_GainCaps
-    :undoc-members:    
-
-.. autoclass:: portPosition
-    :undoc-members:
-
-.. autoclass:: streamingInterface
-    :undoc-members:
-
-.. autoclass:: vetoAlgorithm
-    :undoc-members:
-
-.. autoclass:: gainMode
-    :undoc-members:
+    :show-inheritance:

docs/src/pyexamples.rst

@@ -1,92 +1,7 @@
 Examples
 ================
 
-Some short examples on how to use slsdet. If something is missing don't hesitate to
-open an issue in our our  `github repo
-<https://github.com/slsdetectorgroup/slsDetectorPackage>`_. 
-
-
-------------------------------------
-Setting exposure time 
-------------------------------------
-
-Setting and reading back exposure time can be done either using a Python 
-datetime.timedelta, DurationWrapper or by setting the time in seconds. 
-
-::
-
-    # Set exposure time to 1.2 seconds
-    >>> d.exptime = 1.2
-    >>> d.exptime = 5e-07
-
-    # Setting exposure time using timedelta (upto microseconds precision)
-    import datetime as dt
-    >>> d.exptime = dt.timedelta(seconds = 1.2)
-    >>> d.exptime = dt.timedelta(seconds = 1, microseconds = 3)
-
-    # With timedelta any arbitrary combination of units can be used
-    >>> t = dt.timedelta(microseconds = 100, seconds = 5.3, minutes = .3)
-
-    # using DurationWrapper to set in seconds
-    >>> from slsdet import DurationWrapper
-    >>> d.exptime = DurationWrapper(1.2)
-    
-    # using DurationWrapper to set in ns
-    >>> t = DurationWrapper()
-    >>> t.set_count(500)
-    >>> d.exptime = t
-
-    # To set exposure time for individual detector one have to resort
-    # to the C++ style API.
-    # Sets exposure time to 1.2 seconds for module 0, 6 and 12
-    >>> d.setExptime(1.2, [0, 6, 12]) 
-    >>> d.setExptime(dt.timedelta(seconds = 1.2), [0, 6, 12]) 
-
-    # to get in seconds
-    >>> d.period
-    181.23
-
-    # to get in DurationWrapper
-    >>> d.getExptime()
-    [sls::DurationWrapper(total_seconds: 181.23 count: 181230000000)]
-
-
-
-------------------------------------
-Converting numbers to hex
-------------------------------------
-
-Python support entering numbers in  format by using the 0x prefix. However, when reading 
-back you will get a normal integer. This can then be converted to a hex string representation
-using the built in hex() function. 
-
-.. code-block :: python
-
-    from slsdet import Detector
-    >>> d = Detector()
-    >>> d.patwait0 = 0xaa
-    >>> d.patwait0
-    170
-
-    # Convert to  string
-    >>> hex(d.patwait0)
-    '0xaa'
-
-For multiple values one can use a list comprehension to loop over the values. 
-
-.. code-block :: python
-
-    >>> values = [1,2,3,4,5]
-    >>> [(v) for v in values]
-    ['0x1', '0x2', '0x3', '0x4', '0x5']
-
-    # or to a single string by passing the list to .join
-    >>> ', '.join([hex(v) for v in values])
-    '0x1, 0x2, 0x3, 0x4, 0x5'
-
-
-
-    
+Some short hints on how to use the detector
 
 ------------------------
 Simple threshold scan
@@ -159,39 +74,37 @@ But lets start looking at the at the manual way:
 ::
 
     import time
-    from slsdet import Detector, runStatus
+    from sls_detector import Eiger
+    d = Eiger()
 
+    n = 10
+    t = 1
 
-    n_frames = 10
-    t_exp = 1
+    d.exposure_time = t
+    d.n_frames = n
+    d.reset_frames_caught()
 
-    # Set exposure time and number of frames
-    d = Detector()
-    d.exptime = t_exp
-    d.frames = n_frames
-
-    # Start the measurement
+    #Start the measurement
     t0 = time.time()
-    d.startDetector()
-    d.startReceiver()
+    d.start_receiver()
+    d.start_detector()
 
-    # Wait for the detector to be ready or do other important stuff
-    time.sleep(t_exp * n_frames)
+    #Wait for the detector to be ready or do other important stuff
+    time.sleep(t*n)
 
-    # check if the detector is ready otherwise wait a bit longer
-    while d.status != runStatus.IDLE:
+    #check if the detector is ready otherwise wait a bit longer
+    while d.status != 'idle':
         time.sleep(0.1)
 
-    # Stop the receiver after we got the frames
-    # Detector is already idle so we don't need to stop it
-    d.stopReceiver()
-
-    lost = d.rx_framescaught - n_frames
-    print(
-        f"{n_frames} frames of {t_exp}s took {time.time()-t0:{.3}}s with {lost} frames lost "
-    )
+    #Stop the receiver after we got the frames
+    #Detector is already idle so we don't need to stop it
+    d.stop_receiver()
 
+    lost = d.frames_caught - n
+    print(f'{n} frames of {t}s took {time.time()-t0:{.3}}s with {lost} frames lost ')
 
+    #Reset to not interfere with a potential next measurement
+    d.reset_frames_caught()
 
 Instead launching d.acq() from a different process is a bit easier since the control of receiver and detector
 is handled in the acq call. However, you need to join the process used otherwise a lot of zombie processes would
@@ -201,113 +114,30 @@ hang around until the main process exits.
 
     import time
     from multiprocessing import Process
-    from slsdet import Detector, runStatus
+    from sls_detector import Eiger
 
+    def acquire():
+        """
+        Create a new Eiger object that still referes to the same actual detector
+        and same shared memory. Then launch acq.
+        """
+        detector = Eiger()
+        detector.acq()
 
-    d = Detector()
+    #This is the detector we use throughout the session
+    d = Eiger()
 
-    #Create a separate process to run acquire in
-    p = Process(target=d.acquire)
+    #Process to run acquire
+    p = Process(target=acquire)
 
     #Start the thread and short sleep to allow the acq to start
     p.start()
     time.sleep(0.01)
 
     #Do some other work
-    while d.status != runStatus.IDLE:
-        print("Working")
+    while d.busy is True:
+        print(d.busy)
         time.sleep(0.1)
 
     #Join the process
     p.join()
-
-
-------------------------------
-Setting and getting times
-------------------------------
-
-::
-
-    import datetime as dt
-    from slsdet import Detector
-    from slsdet.utils import element_if_equal
-
-    d = Detector()
-
-    # The simplest way is to set the exposure time in 
-    # seconds by using the exptime property
-    # This sets the exposure time for all modules
-    d.exptime = 0.5
-
-    # exptime also accepts a python datetime.timedelta (upto microseconds resolution)
-    t = dt.timedelta(milliseconds = 2.3)
-    d.exptime = t
-
-    # or combination of units
-    t = dt.timedelta(minutes = 3, seconds = 1.23)
-    d.exptime = t
-
-    # using DurationWrapper to set in seconds
-    >>> from slsdet import DurationWrapper
-    >>> d.exptime = DurationWrapper(1.2)
-    
-    # using DurationWrapper to set in ns
-    >>> t = DurationWrapper()
-    >>> t.set_count(500)
-    >>> d.exptime = t
-
-    # exptime however always returns the time in seconds
-    >>> d.exptime
-    181.23 
-
-    # To get back the exposure time for each module 
-    # it's possible to use getExptime, this also returns
-    # the values as  DurationWrapper
-
-    >>> d.getExptime()
-    [sls::DurationWrapper(total_seconds: 181.23 count: 181230000000)]
-
-    # In case the values are the same it's possible to use the
-    # element_if_equal function to reduce the values to a single 
-    # value
-
-    >>> t = d.getExptime()
-    >>> element_if_equal(t)
-    sls::DurationWrapper(total_seconds: 1.2 count: 1200000000)
-
-
---------------
-Reading dacs
---------------
-
-::
-
-    from slsdet import Detector, Eiger, dacIndex
-
-    #using the specialized class
-    e = Eiger()
-    >>> e.dacs
-    ========== DACS =========
-    vsvp      :    0    0
-    vtrim     : 2480 2480
-    vrpreamp  : 3300 3300
-    vrshaper  : 1400 1400
-    vsvn      : 4000 4000
-    vtgstv    : 2556 2556
-    vcmp_ll   : 1000 1000
-    vcmp_lr   : 1000 1000
-    vcal      :    0    0
-    vcmp_rl   : 1000 1000
-    rxb_rb    : 1100 1100
-    rxb_lb    : 1100 1100
-    vcmp_rr   : 1000 1000
-    vcp       : 1000 1000
-    vcn       : 2000 2000
-    vishaper  : 1550 1550
-    iodelay   :  650  650
-
-    # or using the general class and the list
-    d = Detector()
-    for dac in d.daclist:
-        r = d.getDAC(dac, False)
-        print(f'{dac.name:10s} {r}')

docs/src/pygettingstarted.rst

@@ -1,260 +0,0 @@
-Getting Started 
-==================
-
-
---------------------
-Which Python?  
---------------------
-
-We require at least Python 3.6 and strongly recommended that you don't use the system
-Python installation. The examples in this documentation uses `conda
-<https://docs.conda.io/en/latest/miniconda.html>`_ since it provides good support
-also for non Python packages but there are also other alternatives like, pyenv. 
-
-Using something like conda also allows you to quickly switch beteen different Python 
-environments. 
-
----------------------
-Building from Source 
----------------------
-
-If you are not installing slsdet binaries from conda, but instead building from 
-source, please refer to  :ref:`the installation section<Installation>` for details.
-
-Don't forget to compile with the option SLS_USE_PYTHON=ON to enable the Python 
-bindings or if you use the cmk.sh script -p.
-
-.. note ::
-
-    Ensure that the sls det python lib compiled is for the expected python version.
-    For example, build/bin/_slsdet.cpython-39-x86_64-linux-gnu.so for Python v3.9.x
-
-
----------------------
-PYTHONPATH 
----------------------
-
-If you install slsdet binaries using conda everything is set up and you can
-directly start using the Python bindings. However, if you build 
-from source you need to tell Python where to find slsdet to use it. This
-can be done by adding your build/bin directory to PYTHONPATH. 
-
-.. code-block:: bash
-
-    export PYTHONPATH = /path/to/your/build/bin:$PYTHONPATH
-
---------------------------------------
-Which detector class should I use? 
---------------------------------------
-
-We provide a generic class called Detector and detector specific 
-versions like, Eiger, Jungfrau etc. The most or all functionality 
-is there in the base class except the convenient access to dacs
-and temperatures. 
-
-:: 
-
-    from slsdet import Detector, Eiger
-
-    d = Detector()
-    e = Eiger()
-
-    # Both classes can be used to control an Eiger detector
-    d.exptime = 0.5
-    e.period = 1
-
-    # But Eiger gives a simpler interface to the dacs
-    >>> e.dacs
-    ========== DACS =========
-    vsvp           :    0
-    vtrim          : 2480
-    vrpreamp       : 3300
-    vrshaper       : 1400
-    vsvn           : 4000
-    vtgstv         : 2556
-    vcmp_ll        : 1000
-    vcmp_lr        : 1000
-    vcal           :    0
-    vcmp_rl        : 1000
-    rxb_rb         : 1100
-    rxb_lb         : 1100
-    vcmp_rr        : 1000
-    vcp            : 1000
-    vcn            : 2000
-    vishaper       : 1550
-    iodelay        :  650
-
-
-.. note ::
-
-    Depending on user feedback we might move some detector specific
-    functionality to the specialized classes.
-
-
-----------------------------------
-Hey, there seems to be two APIs?
-----------------------------------
-
-To make the Python API approachable, both if you come from the command line 
-or are using the C++ API, we provide two interfaces to the detector. 
-One is property based and tries to stay as close to the command line syntax
-as is possible, and the other one directly maps the C++ API found in Detector.h.
-There is also an underlying design reason for the two APIs since we auto 
-generate the bindings to the C++ code using a mix of pybind11 and clang-tools. 
-The property based API covers most of the functionality but in some cases 
-you have to reach for the C++ like interface. 
-
-
-::  
-
-    d = Detector()
-
-    # C++ like API 
-    d.setExptime(0.1)
-
-    # or a bit more pythonic
-    d.exptime = 0.1
-
-The c++ style API offers more control over access to individual modules
-in a large detector.
-
-:: 
-
-    # Set exposure time for module 1, 5 and 7
-    d.setExptime(0.1, [1,5,7])
-
---------------------
-Finding functions 
---------------------
-
-To find out which properties and methods that a Python object have you
-can use dir()
-
-::
-
-    >>> from slsdet import Detector
-    >>> d = Detector()
-    >>> dir(d)
-    ['__class__', '__delattr__', '__dict__', '__dir__', '__doc__', 
-    '__eq__', '__format__', '__ge__', '__getattribute__', '__gt__', 
-    '__hash__', '__init__', '__init_subclass__', '__le__', '__len__', 
-    '__lt__', '__module__', '__ne__', '__new__', '__reduce__', 
-    '__reduce_ex__', '__repr__', '__setattr__', '__sizeof__', 
-    '__str__', '__subclasshook__', '_adc_register', '_frozen', 
-    '_register', 'acquire', 'adcclk', 'adcphase', 'adcpipeline', 
-    'adcreg', 'asamples', 'auto_comp_disable', 'clearAcquiringFlag', 
-    'clearBit', 'clearROI', 'client_version', 'config',  
-    'counters', 'daclist', 'dacvalues', 'dbitclk', 'dbitphase' ...
-
-Since the list for Detector is rather long it's an good idea to filter it. 
-The following example gives you properties and methods containing time in 
-their name.
-
-:: 
-
-    >>> [item for item in dir(d) if 'time' in item]
-    ['compdisabletime', 'exptime', 'exptimel', 'frametime', 'getExptime', 
-    'getExptimeForAllGates', 'getExptimeLeft', 'getSubExptime', 'patwaittime', 
-    'patwaittime0', 'patwaittime1', 'patwaittime2', 'runtime', 'setExptime', 
-    'setSubExptime', 'subdeadtime', 'subexptime']
-
-
-The above method works on any Python object but for convenience we also 
-included two functions to find names. View prints the names one per line
-while find returns a list of names. 
-
-::
-
-    from slsdet.lookup import view, find
-
-    >>> view('exptime')
-    exptime
-    exptimel
-    getExptime
-    getExptimeForAllGates
-    getExptimeLeft
-    getSubExptime
-    setExptime
-    setSubExptime
-    subexptime
-
-
-    >>> find('exptime')
-    ['exptime', 'getExptime', 'getExptimeForAllGates', 'getExptimeLeft', 
-    'getSubExptime', 'setExptime', 'setSubExptime', 'subexptime']
-
-
-------------------------------------
-Finding out what the function does
-------------------------------------
-
-To access the documentation of a function directly from the Python prompt use help(). 
-
-.. code-block :: python
-
-    >>> help(Detector.period)
-    Help on property:
-
-        Period between frames, accepts either a value in seconds or datetime.timedelta
-        
-        Note
-        -----
-        :getter: always returns in seconds. To get in DurationWrapper, use getPeriod
-        
-        Example
-        -----------
-        >>> # setting directly in seconds
-        >>> d.period = 1.05
-        >>>
-        >>> # setting directly in seconds
-        >>> d.period = 5e-07
-        >>> 
-        >>> # using timedelta (up to microseconds precision)
-        >>> from datatime import timedelta
-        >>> d.period = timedelta(seconds = 1, microseconds = 3)
-        >>> 
-        >>> # using DurationWrapper to set in seconds
-        >>> from slsdet import DurationWrapper
-        >>> d.period = DurationWrapper(1.2)
-        >>> 
-        >>> # using DurationWrapper to set in ns
-        >>> t = DurationWrapper()
-        >>> t.set_count(500)
-        >>> d.period = t
-        >>>
-        >>> # to get in seconds
-        >>> d.period
-        181.23
-        >>> 
-        >>> d.getExptime()
-        [sls::DurationWrapper(total_seconds: 181.23 count: 181230000000)]
-
-
-
-----------------------
-Where are the ENUMs?
-----------------------
-
-To set some of the detector settings like file format you have
-to pass in an enum. 
-
-:: 
-
-    >>> d.setFileFormat(fileFormat.BINARY)
-    
-The enums can be found in slsdet.enums 
-
-::
-
-    import slsdet
-    >>> [e for e in dir(slsdet.enums) if not e.startswith('_')]
-    ['M3_GainCaps', 'burstMode', 'clockIndex', 'cls', 'dacIndex', 'detectorSettings', 
-    'detectorType', 'dimension', 'externalSignalFlag', 'fileFormat', 
-    'frameDiscardPolicy', 'gainMode', 'name', 'polarity', 'portPosition', 
-    'readoutMode', 'runStatus', 'speedLevel', 'streamingInterface', 'timingMode', 
-    'timingSourceType', 'vetoAlgorithm']
-
-
-    # Even though importing using * is not recommended one could
-    # get all the enums like this: 
-    >>> from slsdet.enums import *

docs/src/quick_start_guide.rst

@@ -1,146 +0,0 @@
-Quick Start Guide
-=================
-
-Detector
---------
-Start up detector (with cooling if required). Ensure both control server and stop server is running on-board.
-
-Or use a detector simulator to test. Click :ref:`here<Virtual Detector Servers>` for further instructions.
-
-Receiver
---------
-
-| One has to start the slsReceiver before loading config file or using any receiver commands (prefix: **rx_** )
-
-For a Single Module
-    .. code-block:: bash  
-
-        # default port 1954
-        slsReceiver
-
-        # custom port 2012
-        slsReceiver -t2012
-
-
-For Multiple Modules
-    .. code-block:: bash  
-
-        # slsMultiReceiver [starting port] [number of receivers] [print each frame header for debugging]
-        slsMultiReceiver 2012 2 0 
-
-
-Client
-------
-
-Refer :ref:`Sample Config file` to create config file.
-
-.. code-block:: bash  
-
-    # load config file
-    sls_detector_put config /path/sample.config
-
-    # set number of frames
-    sls_detector_put frames 5
-
-    # acquire
-    sls_detector_acquire
-
-
-.. _Sample Config file:
-
-Sample Config file
-^^^^^^^^^^^^^^^^^^
-There are sample config files for each detector in slsDetectorPackage/examples folder.
-
-For a Single Module
-    .. code-block:: bash  
-
-        # connects to module
-        hostname bchipxxx
-
-        # connects to receiver at default port
-        rx_hostname mpc1922
-        # or to connect to specific port
-        # rx_hostname mpc1922:2012
-
-        # sets destination udp ports (not needed, default is 50001)
-        udp_dstport 50012
-
-        # 1g data out
-        # source udp ips must be same subnet at destintaion udp ips
-        # udp_srcip 192.168.1.112
-        # destination udp ip picked up from rx_hostname (if auto)
-        # udp_dstip auto
-
-        # 10g data out
-        udp_srcip 10.30.20.200
-        udp_dstip 10.30.20.6
-
-        # set file path
-        fpath /tmp
-
-For a Single Module with custom Receiver (not slsReceiver)
-    .. code-block:: bash  
-
-        # connects to module
-        hostname bchipxxx
-
-        # sets destination udp ports (not needed, default is 50001)
-        udp_dstport 50012
-
-        # source udp ips must be same subnet at destintaion udp ips
-        udp_srcip 192.168.1.112
-
-        # destination udp ip 
-        udp_dstip 192.168.1.100
-
-        # source udp mac 
-        udp_srcmac aa:bb:cc:dd:ee:ff
-        
-        # destination udp mac 
-        udp_dstmac 3c:ab:98:bf:50:60
-
-        # set file path
-        fpath /tmp
-
-For Multiple Modules
-    .. code-block:: bash  
-
-        # connects to mulitple modules
-        hostname bchipxxx+bchipyyy+
-
-        # tcp port increases for each module (multi detector command)
-        rx_tcpport 2012
-
-        # connects to receivers at ports 2012 and 2014
-        rx_hostname mpc1922
-
-        # increasing udp ports (multi detector command)
-        udp_dstport 50012
-
-        # source udp ips must be same subnet at destintaion udp ips
-        0:udp_srcip 192.168.1.112
-        1:udp_srcip 192.168.1.114
-
-        # destination udp ip picked up from rx_hostname (if auto)
-        udp_dstip auto
-
-        # set file path
-        fpath /tmp
-
-Gui
-----
-
-Compile with SLS_USE_GUI=ON in cmake or -g option in cmk.sh script. One can also just use the conda binary. Refer :ref:`installation instructions<Installation>`.
-
-.. code-block:: bash  
-
-    slsDetectorGui
-
-
-.. note ::
-    | The streaming high water mark (commmand: rx_zmqhwm) and the receiving high water mark (command: zmqhwm) is by default the lib zmq's default (currently 1000).
-    | At Gui startup, these values are set to 2. Hence, for very fast detectors, many frames will be dropped to be able to view the latest in the gui.
-    | One can still change this setting in the gui in the Plot tab (ZMQ Streaming), from the command line or API.
-    | Both hwm's can be set to a -1 to use the lib's default.
-    | Since the dummy end of acquisition packet streamed from receiver might also be lost, receiver restreams until gui acknowledges.

docs/src/receiver.rst

@@ -1,6 +1,6 @@
 Receiver
 ==============================================
 
-.. doxygenclass:: sls::Receiver
+.. doxygenclass:: slsReceiver
    :members:
 ..    :undoc-members:

docs/src/receivers.rst

@@ -1,38 +0,0 @@
-Receivers
-=================
-
-Receiver processes can be run on same or different machines as the client, receives the data from the detector (via UDP packets).
-When using the slsReceiver/ slsMultiReceiver, they can be further configured by the client control software (via TCP/IP) to set file name, file path, progress of acquisition etc.
-
-
-To know more about detector receiver configuration, please check out :ref:`detector udp header and udp commands in the config file <detector udp header>`
-
-Custom Receiver
-----------------
-
-| When using  custom receiver with our package, ensure that **udp_dstmac** is also configured in the config file. This parameter is not required when using slsReceiver.
-
-| Cannot use "auto" for **udp_dstip**.
-
-| Also ensure that there are no **rx_** commands in the config file. These commands are for configuring the slsReceiver.
-
-Example of a custom receiver config file
-
-* The main difference is the lack of **rx_** commands or file commands (eg. fwrite, fpath) and the udp_dstmac is required in config file.
-
-.. code-block:: bash
-
-    # detector hostname
-    hostname bchip052
-
-    # udp destination port (receiver)
-    udp_dstport 50004
-
-    # udp destination ip (receiver)
-    udp_dstip 10.0.1.100
-
-    # udp source ip (same subnet as udp_dstip)
-    udp_srcip 10.0.1.184
-
-    # udp destination mac
-    udp_dstmac 22:47:d5:48:ad:ef

docs/src/result.rst

@@ -1,5 +1,3 @@
-.. _Result Class:
-
 Result
 ==============================================
 

docs/src/serverdefaults.rst

@@ -1,106 +0,0 @@
-Default Values
-==============================================
-
-Mythen3
--------------
-
-.. csv-table:: Default values
-   :file: mythen3.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-DACS
-^^^^^^^^^^^^^
-
-.. csv-table:: Mythen3 DACS
-   :file: mythen3-dacs.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-Gotthard2
--------------
-
-.. csv-table:: Default values
-   :file: gotthard2.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-DACS
-^^^^^^^^^^^^^
-
-.. csv-table:: Gotthard 2 DACS
-   :file: gotthard2-dacs.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-Moench
--------------
-
-.. csv-table:: Default values
-   :file: moench.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-DACS
-^^^^^^^^^^^^^
-
-.. csv-table:: Moench DACS
-   :file: moench-dacs.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-Ctb
--------------
-
-.. csv-table:: Default values
-   :file: ctb.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-Eiger
--------------
-
-.. csv-table:: Default values
-   :file: eiger.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-DACS
-^^^^^^^^^^^^^
-
-.. csv-table:: Eiger DACS
-   :file: eiger-dacs.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-Jungfrau
--------------
-
-.. csv-table:: Default values
-   :file: jungfrau.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-DACS
-^^^^^^^^^^^^^
-
-.. csv-table:: Jungfrau DACS
-   :file: jungfrau-dacs.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-Gotthard
--------------
-
-.. csv-table:: Default values
-   :file: gotthard.csv
-   :widths: 35, 35
-   :header-rows: 1
-
-DACS
-^^^^^^^^^^^^^
-
-.. csv-table:: Gotthard DACS
-   :file: gotthard-dacs.csv
-   :widths: 35, 35
-   :header-rows: 1

docs/src/servers.rst

@@ -1,100 +0,0 @@
-Getting Started
-===============
-
-Detector Servers include:
-   * Control server [default port: 1952]
-      * Almost all client communication.
-   * Stop server [default port: 1953]
-      *  Client requests for detector status, stop acquisition, temperature, advanced read/write registers.
-
-When using a blocking acquire command (sls_detector_acquire or Detector::acquire), the control server is blocked until end of acquisition. However, stop server commands could be used in parallel.
-
-
-Location
----------
-   slsDetectorPackage/serverBin/ folder in every release.
-
-
-.. _Detector Server Arguments:
-
-Arguments
----------
-
-   .. code-block:: bash  
-
-      Possible arguments are:
-         -v, --version            : Software version
-         -p, --port <port>        : TCP communication port with client. 
-         -g, --nomodule           : [Mythen3][Gotthard2] 
-                                    Generic or No Module mode. Skips detector type checks. 
-         -f, --phaseshift <value> : [Gotthard] only. Sets phase shift. 
-         -d, --devel              : Developer mode. Skips firmware checks. 
-         -u, --update             : Update mode. Skips firmware checks and initial detector setup. 
-         -i, --ignore-config      : [Eiger][Jungfrau][Gotthard][Gotthard2][Moench] 
-                                    Ignore config file. 
-         -m, --master <master>    : [Eiger][Mythen3][Gotthard][Gotthard2] 
-                                    Set Master to 0 or 1. Precedence over config file. Only for virtual servers except Eiger. 
-         -t, --top <top>          : [Eiger] Set Top to 0 or 1. Precedence over config file. 
-         -s, --stopserver         : Stop server. Do not use as it is created by control server 
-
-
-.. _Automatic start servers:
-Automatic start 
-------------------
-
-One can start the on-board detector server automatically upon powering on the board.
-
-#. Create a soft link to the binary on board 
-   :
-      .. code-block:: bash
-      
-         ln -sf someDetectorServervx.x.x someDetectorServer
-
-
-
-#. Do the following depending on the detector type :
-
-   Eiger
-      .. code-block:: bash
-         
-         # create script in rc5.d on the board
-         vi /etc/rc5.d/S50board_com.sh
-
-         # enter the following (edit server name)
-         #! /bin/sh
-         /home/root/executables/eigerDetectorServer &> /dev/null &
-         exit 0
-
-   Jungfrau | Moench | CTB | Gotthard I
-      .. code-block:: bash
-
-         # Edit inittab on board
-         vi /etc/inittab
-
-         # enter the following line
-         ttyS0::respawn:/./xxxDetectorServer
-
-
-   Gotthard II | Mythen III
-      .. code-block:: bash
-         
-         # create script in init.d on board
-         vi /etc/init.d/S99detServer.sh
-
-         # enter the following (edit server name)
-         #! /bin/sh
-         cd /root >> /dev/null
-         /root/xxxDetectorServer >> /dev/null &
-
-
-#. Sync, reboot and verify
-   :
-      .. code-block:: bash
-      
-         sync
-
-         # physically reboot for Gotthard II or Mythen III
-         reboot
-
-         # verify
-         ps -ef | grep xxxDetectorServer

docs/src/serverupgrade.rst

@@ -1,66 +0,0 @@
-.. _Detector Server Upgrade:
-Upgrade
-========
-
-
-**Location:** slsDetectorPackage/serverBin/ folder for every release.
-
-.. note :: 
-
-    For Mythen3, Gotthard2 and Eiger, you need to add scripts to automatically start detector server upon power on. See :ref:`Automatic start<Automatic start servers>` for more details.
-
- .. note :: 
-
-    Eiger requires a manual reboot. Or killall the servers and restart the new linked one. If you are in the process of updating firmware, then don't reboot yet.
-
-
-6.1.1+ (no tftp required)
----------------------------------------
-
-#. Program from console
-
-    .. code-block:: bash
-
-        # the following command copies new server, creates a soft link to xxxDetectorServerxxx
-        # [Jungfrau][CTB][Moench] also deletes the old server binary and edits initttab to respawn server on reboot
-        # Then, the detector controller will reboot (except Eiger)
-        sls_detector_put updatedetectorserver /complete-path-to-binary/xxxDetectorServerxxx
-
-#. Copy the detector server specific config files or any others required to the detector:
-
-   .. code-block:: bash
-
-        sls_detector_put execcommand "tftp pcxxx -r configxxx -g"
-
-5.0.0 - 6.1.1
---------------
-
-#. Install tftp and copy detector server binary to tftp folder
-#. Program from console
-
-    .. code-block:: bash
-
-        # the following command copies new server from pc tftp folder, creates a soft link to xxxDetectorServerxxx
-        # [Jungfrau][CTB][Moench] also edits initttab to respawn server on reboot
-        # Then, the detector controller will reboot (except Eiger)
-        sls_detector_put copydetectorserver xxxDetectorServerxxx pcxxx
-
-#. Copy the detector server specific config files or any others required to the detector:
-
-   .. code-block:: bash
-
-        sls_detector_put execcommand "tftp pcxxx -r configxxx -g"
-
-
-Troubleshooting with tftp
-^^^^^^^^^^^^^^^^^^^^^^^^^
-
-#. tftp write error: There is no space left. Please delete some old binaries and try again.
-
-#. text file busy: You are trying to copy the same server.
-
-
-< 5.0.0
---------
-
-Please contact us.

docs/src/slsreceiver.rst

@@ -1,360 +0,0 @@
-slsReceiver/ slsMultiReceiver
-================================
-
-| One has to start the slsReceiver before loading config file or using any receiver commands (prefix: **rx_** )
-
-For a Single Module
-    .. code-block:: bash  
-
-        # default port 1954
-        slsReceiver
-
-        # custom port 2012
-        slsReceiver -t2012
-
-
-For Multiple Modules
-    .. code-block:: bash  
-
-        # each receiver (for each module) requires a unique tcp port (if all on same machine)
-
-        # using slsReceiver in multiple consoles
-        slsReceiver
-        slsReceiver -t1955
-
-        # slsMultiReceiver [starting port] [number of receivers]
-        slsMultiReceiver 2012 2
-
-        # slsMultiReceiver [starting port] [number of receivers] [print each frame header for debugging]
-        slsMultiReceiver 2012 2 1
-
-
-Client Commands 
------------------
-
-| One can remove **udp_dstmac** from the config file, as the slsReceiver fetches this from the **udp_ip**.
-
-| One can use "auto" for **udp_dstip** if one wants to use default ip of **rx_hostname**.
-
-| The first command to the receiver (**rx_** commands) should be **rx_hostname**. The following are the different ways to establish contact.
-
-    .. code-block:: bash  
-
-        # default receiver tcp port (1954)
-        rx_hostname xxx
-
-        # custom receiver port
-        rx_hostname xxx:1957
-
-        # custom receiver port
-        rx_tcpport 1954
-        rx_hostname xxx
-
-        # multi modules with custom ports
-        rx_hostname xxx:1955+xxx:1956+
-        
-        
-        # multi modules using increasing tcp ports when using multi detector command
-        rx_tcpport 1955
-        rx_hostname xxx
-
-        # or specify multi modules with custom ports on same rxr pc
-        0:rx_tcpport 1954
-        1:rx_tcpport 1955
-        2:rx_tcpport 1956
-        rx_hostname xxx
-
-        # multi modules with custom ports on different rxr pc
-        0:rx_tcpport 1954
-        0:rx_hostname xxx
-        1:rx_tcpport 1955
-        1:rx_hostname yyy
-
-
-| Example commands:
-
-    .. code-block:: bash 
-
-        # to get a list of receiver commands (these dont include file commands)
-        sls_detector_get list | grep rx_
-
-        # some file commands are:
-        fwrite
-        foverwrite
-        findex
-        fpath
-        fname
-        fmaster
-        fformat
-
-        # to get help on a single commands
-        sls_detector_get -h rx_framescaught
-
-
-ZMQ: Json Header Format
-------------------------
-
-
-**Change in field names from slsDetectorPackage v6.x.x to v7.0.0**
-
-* detSpec1 <- bunchId
-* detSpec2 <- reserved
-* detSpec3 <- debug
-* detSpec4 <- roundRNumber
-
-
-**Format**
-
-    .. code-block:: bash 
-
-        {
-            "jsonversion": unsigned int,
-            "bitmode": unsigned int,
-            "fileIndex": unsigned long int,
-            "detshape": [
-                unsigned int,
-                unsigned int
-            ],
-            "shape": [
-                unsigned int,
-                unsigned int
-            ],
-            "size": unsigned int,
-            "acqIndex": unsigned long int,
-            "frameIndex": unsigned long int,
-            "progress": double,
-            "fname": string,
-            "data": unsigned int,
-            "completeImage": unsigned int,
-
-            "frameNumber": unsigned long long int,
-            "expLength": unsigned int,
-            "packetNumber": unsigned int,
-            "detSpec1": unsigned long int,
-            "timestamp": unsigned long int,
-            "modId": unsigned int,
-            "row": unsigned int,
-            "column": unsigned int,
-            "detSpec2": unsigned int,
-            "detSpec3": unsigned int,
-            "detSpec4": unsigned int,
-            "detType": unsigned int,
-            "version": unsigned int,
-            
-            "flipRows": unsigned int,
-            "quad": unsigned int,
-            "addJsonHeader": {
-                string : string
-            }
-        }
-
-   +--------------+----------------------------------------------+
-   |   Field      |       Description                            |
-   +--------------+----------------------------------------------+
-   | jsonversion  | Version of the json header.                  |
-   |              | Value at 4 for v6.x.x and v7.x.x             |
-   +--------------+----------------------------------------------+
-   | bitmode      | Bits per pixel [4|8|16|32]                   |
-   +--------------+----------------------------------------------+
-   | fileIndex    | Current file acquisition index               |
-   +--------------+----------------------------------------------+
-   | detshape     | Geometry of the entire detector              |
-   +--------------+----------------------------------------------+
-   | shape        | Geometry of the current port streamed out    |
-   +--------------+----------------------------------------------+
-   | size         | Size of image of current port in bytesout    |
-   +--------------+----------------------------------------------+
-   | acqIndex     | Frame number from the detector (redundant)   |
-   +--------------+----------------------------------------------+
-   | frameIndex   | Frame number of current acquisition          |
-   |              | (Starting at 0)                              |
-   +--------------+----------------------------------------------+
-   | progress     | Progress of current acquisition in %         |
-   +--------------+----------------------------------------------+
-   | fname        | Current file name                            |
-   +--------------+----------------------------------------------+
-   | data         | 1 if there is data following                 |
-   |              | 0 if dummy header                            |
-   +--------------+----------------------------------------------+
-   | completeImage| 1 if no missing packets for this frame       |
-   |              | in this port, else 0                         |
-   +--------------+----------------------------------------------+
-   | frameNumber  | Frame number                                 |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | expLength    | subframe number (32 bit eiger)               |
-   |              | or real time exposure time in 100ns (others) |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | packetNumber | Number of packets caught for that frame      |
-   +--------------+----------------------------------------------+
-   | detSpec1     | See :ref:`here<Detector Specific Fields>`    |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | timestamp    | Timestamp with 10 MHz clock                  |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | modId        | Module Id                                    |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | row          | Row number in detector                       |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | column       | Column number in detector                    |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | detSpec2     | See :ref:`here<Detector Specific Fields>`    |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | detSpec3     | See :ref:`here<Detector Specific Fields>`    |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | detSpec4     | See :ref:`here<Detector Specific Fields>`    |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | detType      | Detector type enum                           |
-   | detSpec3     | See :ref:`Detector enum<Detector Enum>`      |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | version      | Detector header version. At 2                |
-   |              | [From detector udp header]                   |
-   +--------------+----------------------------------------------+
-   | flipRows     | 1 if rows should be flipped.                 |
-   |              | Usually for Eiger bottom.                    |
-   +--------------+----------------------------------------------+
-   | quad         | 1 if its an Eiger quad.                      |
-   +--------------+----------------------------------------------+
-   | addJsonHeader| Optional custom parameters that is required  |
-   |              | for processing code.                         |
-   +--------------+----------------------------------------------+
-
-
-SLS Receiver Header Format
---------------------------
-
-It is 112 bytes and consists of:
-    * 48 bytes of the SLS Detector Header (described in :ref:`the current detector header <detector udp header>`)
-    * 64 bytes of packet mask
-
-.. code-block:: cpp 
-    
-    typedef struct {
-        uint64_t frameNumber;
-        uint32_t expLength;
-        uint32_t packetNumber;
-        uint64_t detSpec1;
-        uint64_t timestamp;
-        uint16_t modId;
-        uint16_t row;
-        uint16_t column;
-        uint16_t detSpec2;
-        uint32_t detSpec3;
-        uint16_t detSpec4;
-        uint8_t detType;
-        uint8_t version;
-    } sls_detector_header;
-
-    struct sls_receiver_header {
-        sls_detector_header detHeader; /**< is the detector header */
-        sls_bitset packetsMask;        /**< is the packets caught bit mask */
-    };
-
-
-.. note :: 
-
-    | The packetNumber in the SLS Receiver Header will be modified to number of packets caught by receiver for that frame. For eg. Jungfrau will have 128 packets per frame. If it is less, then this is a partial frame due to missing packets.
-    
-    | Furthermore, the bit mask will specify which packets have been received.
-
-
-
-
-File format
---------------
-
-Master file is in json format.
-
-The file name format is [fpath]/[fname]_dx_fy_[findex].raw, where x is module index and y is file index. **fname** is file name prefix and by default "run". **fpath** is '/' by default.
-
-
-Each acquisition will have an increasing acquisition index or findex (if file write enabled). This can be retrieved by using **findex** command. 
-
-
-Each acquisition can have multiple files (the file index number **y**), with **rx_framesperfile** being the maximum number of frames per file. The default varies for each detector type.
-
-
-Some file name examples:
-
-    .. code-block:: bash
-
-        # first file
-        path-to-file/run_d0_f0_0.raw
-
-        # second file after reaching max frames in first file
-        path-to-file/run_d0_f1_0.raw
-        
-        # second acquisition, first file
-        path-to-file/run_d0_f0_1.raw
-
-
-Each acquisition will create a master file that can be enabled/disabled using **fmaster**. This should have parameters relevant to the acquisition.
-
-
-**Binary file format**
-
-This is the default file format. 
-
-
-Each data file will consist of frames, each consisting of slsReceiver Header followed by data for 1 frame.
-
-
-Master file is of ASCII format and will also include the format of the slsReceiver Header.
-
-
-**HDF5 file formats**
-
-#. Compile the package with HDF5 option enabled
-
-    #. Using cmk script: ./cmk.sh -hj9 -d [path of hdf5 dir]
-
-    #. Enable using cmake **-DCMAKE_INSTALL_PREFIX=/path/to/hdf/installation** and **-DSLS_USE_HDF5=ON**
-
-#. Start Receiver process
-
-#. Load config file
-
-#. Set file format from client or in config file
-    .. code-block:: bash
-
-        sls_detector_put fformat hdf5
-
-
-| For multiple, modules, a virtual file linking all the modules is created. Both the data files and virtual files are linked in the master file.
-
-
-Performance 
--------------
-
-Please refer to Receiver PC Tuning options and slsReceiver Tuning under `Troubleshooting <https://slsdetectorgroup.github.io/devdoc/troubleshooting.html>`_.
-
-
-Using Callbacks
-----------------
-
-One can get a callback in the receiver for each frame to:
-    * manipulate the data that will be written to file, or
-    * disable file writing in slsReceiver and take care of the data for each call back
-
-When handling callbacks, the control should be returned as soon as possible, to prevent packet loss from fifo being full.
-
-**Example**
-    * `main cpp file <https://github.com/slsdetectorgroup/api-examples/blob/master/e4-receiver_callbacks.cpp>`_ 
-    * `cmake file <https://github.com/slsdetectorgroup/api-examples/blob/master/CMakeLists.txt>`_. 
-    * how to install the slsDetectorPackage with cmake is provided :ref:`here <build from source using cmake>`.
-    * compile the example **e4-rxr** by:
-
-        .. code-block:: bash
-
-            cmake ../path/to/your/source -DCMAKE_PREFIX_PATH=/path/to/sls/install
-            make
-            

docs/src/troubleshooting.rst

@@ -1,443 +0,0 @@
-Troubleshooting
-=================
-
-If something is missing, don't hesitate to
-open an issue at our  `github repo issues
-<https://github.com/slsdetectorgroup/slsDetectorPackage/issues>`_. 
-
-Common
-------
-
-
-1. Total Failure of Packet Delivery
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-#. Data cable plugged into the wrong interface on board (Jungfrau)
-    * Please ensure that the data cable is plugged into the rightmost interface (default for single interface). The inner one is disabled for PCB v1.0 and must be selected via command for PCB v2.0.
-
-#. Link up and speed
-    * Check ethtool and find if Link Deteced:Yes and Speed is acceptable (>10k).
-    * Check to see if the 10G link is up (blue or red LED on board, close to SFP+). If not:
-
-       * Check transeiver and fibers are compatible (all MMF 850nm or all SMF 1030nm)
-       * Check fiber
-       * Check fiber polarity (if short range, unplug the link anywhere, and look at the light/dark pattern: dark has to mate with light)
-
-#. Detector is not acquiring (Not Eiger)
-    * Take an acquisition with many images and using the following steps instead of acquire:
-
-        .. code-block:: bash
-
-            sls_detector_put status start
-            # keep executing this command to see if the number of frames left keeps decreasing,
-            # which means the detector is acquiring.
-            sls_detector_get framesl 
-
-            # If you are using multiple modules, the previous command can return -1 because each module will return different values. Then, check for a single module instead: sls_detector_get 0:framesl
-
-
-#. Detector is not sending data (Except Eiger)
-    * Check the board to see if the green LED close to SFP is blinking (detector is sending data). If not, detector is not operated properly (period too short/long, no trigger in trigger mode) or misconfigured and needs reboot.
-
-#. Power supply
-    * Check if power supply has enough current. 
-    * For Jungfrau, refer to :ref:`Jungfrau Power Supply Troubleshooting<Jungfrau Troubleshooting Power Supply>`.
-
-#. Ethernet interface not configured for Jumbo frames (10Gb)
-    * Ensure that the interfaces (on NIC and the switch) used in receiver pc have MTU 9000 (jumbo frames) enabled.
-
-
-#. Check if 'rx_frames' counter in 'ifconfig' do not increment for interface.
-    * If no, check switch configuration if present. Port counters of switch can also help to identify problem.
-    * If yes, but receiver software does not see it:
-
-        * Check no firewall (eg. firewalld) is present or add rules
-        * Check that selinux is disabled ( or add rules)
-        
-#. Source UDP IP in config file (Not Eiger)
-    * Ensure it is valid and does not end if 0 or 255. Also ensure that the source ip 'udp_srcip' is in the same subnet as destination ip 'udp_dstip' and the masking in the interface configuration ensures this rule.
-    * Eg. If interface IP is 102.10.10.110 and mask is 255.255.255.0, udp_srcip has to be 102.10.10.xxx (same subnet)
-    * Use ifconfig and route commands to verify etheret interface configuration
-
-
-#. Netstat and netcat
-    * Try with netstat to see if its really listening to the right interface. Or netcat to see if you get packets.
-
-#. Wireshark or Tcpdump
-    * Use one of these to confirm that you receive packets (with the right filtering ie. source and destination ports, ip).
-
-
-
-2. Partial or Random Packet Loss (Performance)
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-.. note ::
-    
-    The following suggestions are for convenience. Please do not follow blindly, research each parameter and adapt it to your system.
-
-#. Receiver PC is not tuned for socket buffer size and input packet queue or other parameters.
-    * Refer to :ref:`Receiver PC Tuning<Receiver PC Tuning>`
-
-#. Wiring
-    * Faulty wiring or connecting cable to incorrect interface.
-
-
-#. Pinging the subnet (receiving only a few number of packets each time)
-    * If a switch is used between a receiver pc and detector instead of plugging the cables directly, one might have to ping any ip in the subnet of the Ethernet interface constantly so that it does not forget the ip during operation.
-    * Eg. if rx_udpip is 10.2.3.100, then ping constantly 10.2.3.xxx, where xxx is any ip other than 100.
-    * Using slsReceiver, you can use a command that does this for you:
-        .. code-block:: bash
-        
-            # arping the interface in a separate thread every minute
-            sls_detector_put rx_arping 1
-
-
-#. Only the slaves get no data 
-    * Check trigger cabling and trigger configuration
-    * When you cannot stop Jungfrau slaves in sync mode, refer to :ref:`Cannot stop slaves<Jungfrau Troubleshooting Sync Slaves Cannot Stop>`.
-
-.. _Receiver PC Tuning:
-
-Receiver PC Tuning Options
-^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-.. note ::
-
-    | xth1 is example interface name in the following examples. 
-    | These settings are lost at pc reboot.
-
-#. Increase maximum receive socket buffer size and socket input packet queue. 
-    * Temporarily (until shut down)
-        .. code-block:: bash
-            
-            # check size
-            sysctl -a | grep rmem
-            sysctl -a | grep backlog
-
-            # set max and default (use 1Gb for Jungfrau and 100Mb for others)
-            sysctl net.core.rmem_max=$((100*1024*1024)) 
-            sysctl net.core.rmem_default=$((100*1024*1024))
-            sysctl net.core.netdev_max_backlog=250000
-
-
-    * Permanently
-            .. code-block:: bash
-
-                # edit /etc/sysctl.conf file
-                # set max and default (use 1Gb for Jungfrau and 100Mb for others)
-                net.core.rmem_max = 104857600
-                net.core.rmem_default= 104857600
-                net.core.netdev_max_backlog = 250000
-
-                # save file and run the following
-                sysctl -p
-
-    .. note ::
-        This is the most basic setting, which is sometimes more than enough.
-
-#. For 10Gb,
-    * MTU must be set up to 9000 for jumbo frames on detector, switch and server NIC
-    
-    * Set up static MAC address tables with separated VLANs
-
-#. Write to memory if not a large disk and pc not fast enough.
-    .. code-block:: bash
-
-        mount -t tmpfs none /ramdisk_folder
-        # or
-        mount -t tmpfs none /mnt/ramdisk -o size=10G
-        # check how many GB memory you can allocate, to avoid swapping otherwise    
-
-
-
-#. Modify ethtool settings. 
-    * rx ring parameters
-        .. code-block:: bash
-
-            # check 
-            ethtool -g xth1
-
-            # set to max value in your pc settings
-            ethtool -G xth1 rx 4096 
-
-    * coalesce settings (might not always work)
-        .. code-block:: bash
-
-            # check 
-            ethtool -c xth1
-
-            # enable adaptive xoalescence parameters
-            ethtool -C xth1 adaptive-rx on
-
-            # set to max value in your pc settings
-            ethtool -C xth1 rx-usecs 100 
-
-    * pause parameters
-        .. code-block:: bash
-
-            # check 
-            ethtool -a xth1
-
-            # set to max value in your pc settings
-            ethtool -A xth1 rx on
-    
-    * generic receiver offload (might not always work)
-        .. code-block:: bash
-
-            # check
-            ethtool -k xth1
-
-            # enable generic receiver offload
-            ethtool -K xth1 gro
-        
-
-#. Disable power saving in CPU frequency scaling and set system to performance 
-    * Check current policy (default might be powersave or schedutil)
-        .. code-block:: bash
-            
-            # check current active governor and range of cpu freq policy
-            cpupower frequency-info --policy
-            # list all available governors for this kernel
-            cpupower frequency-info --governors  
-
-    * Temporarily (until shut down)
-        .. code-block:: bash
-            
-            # set to performance
-            sudo cpupower frequency-set -g performance
-
-            # or
-            cpufreq-info
-            for i in ‘seq 0 7‘; do cpufreq-set -c $i -g performance; done
-            
-    * Permanently
-        .. code-block:: bash
-            
-            # edit /etc/sysconfig/cpupower to preference
-
-            # enable or disable permanently
-            sudo systemctl enable cpupower
-
-#. Give user speicific user scheduling privileges.
-    .. code-block:: bash
-
-        # edit /etc/security/limits.conf
-        # add following line or similar depending on your distribution
-        username rtprio 99
-
-    .. note ::
-
-        This is also set if slsReceiver is run as root user.
-        
-#. Some more advanced options: 
-    .. warning ::
-        
-        Please do not try if you do not understand
-
-    #. reduce the number of queue per NIC to the number of expected streams: ethtool -L xth0 combined 2 
-    #. assign each queue to its stream:  ethtool -U xth0 flow-type tcp4 dst-port 50004 action 1
-    #. assign to each queue (IRQ) one CPU on the right socket:  echo "3"> /proc/irq/47/smp_affinity_list    #change the numbers looking at /proc/interrupts
-    #. disable irqbalance service 
-    #. Be sure that the switch knows the receiver mac address. Most switches reset the mac lists every few minutes, and since the receiver only receives, there is not a periodic refresh of the mac list. In this case, one can set a fixed mac list in the switch, or setup some kind of script arping or pinging out from that interface (will be available in 7.0.0). 
-    #. assign the receiver numa node (also with -m) to the socket where the NIC is attached. To know it, cat /sys/class/net/ethxxx/device/numa_node
-    #. ensure file system performance can handle sustained high data rate:
-        
-        * One can use dd: 
-
-            .. code-block:: bash
-	            
-                dd if=/dev/zero of=/testpath/testfile bs=1M count=100000
-        * Or better fio (which needs to be installed) 
-
-            .. code-block:: bash
-	        
-                fio --name=global –directory=/testpath/ --rw=write --ioengine=libaio --direct=0 --size=200G -- 	numjobs=2 --iodepth=1 --bs=1M –name=job
-
-slsReceiver Tuning
-^^^^^^^^^^^^^^^^^^
-
-#. Starting receiver as root to have scheduling privileges.
-
-#. For 10g, enable flow control
-
-    .. code-block:: bash
-
-        sls_detector_put flowcontrol10g 1
-
-#. Increase slsReceiver ring buffer depth 
-    This can be tuned depending on the number of receivers (modules) and memory available.
-
-    .. code-block:: bash
-
-        # sugggested not to use more than half memory of CPU socket in case of NUMA systems) for this
-
-        sls_detector_get rx_fifodepth
-        # sets number of frames in fifo to 1024 ~1GB per receiver. Default is 2500
-        sls_detector_put rx_fifodepth 1024
-
-#. Increase number of frames per file 
-    This can reduce time taken to open and close files.
-
-    .. code-block:: bash
-
-        sls_detector_get rx_framesperfile
-        sls_detector_put rx_framesperfile 20000
-        # writes all frames into a single file
-        sls_detector_put rx_framesperfile 0
-
-#. Disable file write
-    This can ensure it is not the file system performance hampering high date rate.
-
-    .. code-block:: bash
-
-        sls_detector_put fwrite 0
-
-
-Shared memory error
-^^^^^^^^^^^^^^^^^^^
-For errors due to access or size, use any of the following suggestions.
-    #. Delete shared memory files and try again
-    #. Use environment variable to use a different shared memory ending in jfxx
-        
-        .. code-block:: bash
-
-            # shared memory ending in jfxx
-            export SLSDETNAME=jfxx
-
-    #. USe a different multi shared memory ID
-        .. code-block:: bash
-    
-            sls_detector_put 2-config xxxx.config
-            # or
-            sls_detector_put 2-hostname bchipxxx
-
-To list all shared memory files of sls detector package.
-    .. code-block:: bash
-        
-        ll /dev/shm/slsDetectorPackage*
-        -rw-------. 1 l_d l_d  136 Oct  1 11:42 /dev/shm/slsDetectorPackage_multi_0
-        -rw-------. 1 l_d l_d 3476 Oct  1 11:42 /dev/shm/slsDetectorPackage_multi_0_sls_0
-        -rw-------. 1 l_d l_d 3476 Oct  1 11:42 /dev/shm/slsDetectorPackage_multi_0_sls_1
-
-Cannot connect to detector
-^^^^^^^^^^^^^^^^^^^^^^^^^^
-Ensure both control and stop servers are running on the detector.
-    .. code-block:: bash
-
-        ps -ef | grep jungfrauDetectorServer*
-
-Cannot connect to receiver
-^^^^^^^^^^^^^^^^^^^^^^^^^^
-Start receiver before running a client command that needs to communicate with receiver.
-
-Receiver: cannot bind socket
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-#. slsReceiver or slsMultiReceiver is already open somewhere.
-    * Kill it and restart it.
-
-#. Tcp port is in use by another application.
-    * Start Receiver with a different tcp port and adjust it config file
-        .. code-block:: bash
-
-            # restart receiver with different port
-            slsReceiver -t1980
-
-            # adjust in config file
-            rx_hostname pcxxxx:1980
-
-.. _common troubleshooting multi module data:
-
-Cannot get multi module data
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Possible causes could be the following:
-
-#. Network
-    * If you have a direct connection, check to see if the network cables are connected correctly to corresponding interfaces on the PC side. Check also the network configuration and that the detectors and receivers are in the corresponding subnet.
-
-#. Power Supply
-    * Check power supply current limit.
-    * For Jungfrau, refer to :ref:`Jungfrau Power Supply Troubleshooting<Jungfrau Troubleshooting Power Supply>`.
-
-
-Cannot ping module (Nios)
-^^^^^^^^^^^^^^^^^^^^^^^^^
-
-If you executed "reboot" command on the board, you cannot ping it anymore unless you power cycle. To reboot the controller, please use the software command ("rebootcontroller"), which talks to the microcontroller.
-
-Gotthard2
----------
-
-Cannot get data without a module attached
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-You cannot get data without a module attached as a specific pin is floating. Attach module to get data.
-
-
-Gotthard
-----------
-
-
-Missing first frame or next frame after a delay
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Connect the data link from the Module directly to receiver pc or to a private network.
-
-
-Jungfrau
----------
-
-Temperature event occured
-^^^^^^^^^^^^^^^^^^^^^^^^^
-This will occur only if:
-* temp_threshold (threshold temperature) has been set to a value
-* temp_control (temperature control) set to 1
-* and the temperature overshooted the threshold temperature.
-
-**Consequence**
-* sls_detector_get temp_event will give 1 # temperature event occured
-* the chip will be powered off
-
-**Solution**
-* Even after fixing the cooling, any subsequent powerchip command will fail unless the temperature event has been cleared.
-
-* Clear the temperature event
-    .. code-block:: bash
-        
-        # gives the current chip power status (zero currently as chip powered off)
-        sls_detector_get powerchip 
-
-        # clear temperature event
-        sls_detector_put temp_event 0
-
-        # power on the chip
-        sls_detector_put powerchip 1 
-
-
-.. _Jungfrau Troubleshooting Power Supply:
-
-Cannot get multi module data
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-#. Check :ref:`Common Multi Module Troubleshooting<common troubleshooting multi module data>`
-#. Power Supply
-    * Jungfrau needs a ~4A per module for a short time at startup. If not, it reboots misconfigured.
-    * Comment out this line in the config file: powerchip 1
-    * Powering on the chip increases the power consumption by a considerable amount. If commenting out this line aids in getting data (strange data due to powered off chip), then it could be the power supply current limit. Fix it (possibly to 8A current limit) and uncomment the powerchip line back in config file.
-
-
-
-.. _Jungfrau Troubleshooting Sync Slaves Cannot Stop:
-
-Cannot stop slaves in sync mode
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-#. If cabling is accessible, ensure termination board and flatband cable between the masters and the slaves are connnected properly. Then try to stop.
-#. If cabling is inaccessible, unsync first so that the slaves can get the stop directly from the client using the command. Then, don't use sync mode until the cabling is fixed.
-
-    .. code-block:: bash
-        
-        # unsync, slaves command will fail as it is still in waiting state
-        sls_detector_put sync 0
-
-        # stop should now be successful as master does not determine the stop anymore
-        sls_detector_put stop

docs/src/udpconfig.rst

@@ -1,37 +0,0 @@
-.. _detector udp header:
-
-
-Config file
-============
-
-Commands to configure the UDP in the config file:
-
-.. note :: 
-
-    These command are recommended to be placed before "rx_hostname" if it is used.
-
-Source Port
------------
-    Hardcoded in detector server, starting at 32410.
-
-udp_srcip - Source IP
----------------------
-    IP address of detector UDP interface to send packets from. Do not use for Eiger 1Gb interface (uses its hardware IP). For others, must be in the same subnet as **udp_dstip**.
-
-udp_srcmac - Source MAC
------------------------
-    MAC address of detector UDP interface to send packets from. Do not use for Eiger (uses hardware mac). For others, it is not necessary, but can help for switch and debugging to put unique values for each module.
- 
-
-udp_dstport - Desintation Port
--------------------------------
-    Port in receiver pc to listen to packets from the detector.
-
-udp_dstip - Destination IP
---------------------------
-    IP address of interface in receiver pc to listen to packets from detector. If **auto** is used (only when using slsReceiver/ slsMultiReceiver), the IP of **rx_hostname** is picked up.
-
-udp_dstmac - Destination MAC
-----------------------------
-    MAC address of interface in receiver pc to list to packets from detector. Only required when using custom receiver, else slsReceiver/slsMultiReceiver picks it up from **udp_dstip**.
-

docs/src/udpdetspec.rst

@@ -1,152 +0,0 @@
-.. _detector specific fields:
-
-Detector Specific Fields
-========================
-
-Please check out :ref:`the current detector header <detector udp header>` to see 
-where the detector specific fields are placed.
-
-
-
-Eiger
-------
-
-.. table:: Detector Specific Field
-   
-   +----------+------------------------------+
-   | expLength| Sub Frame Number             |
-   +----------+------------------------------+
-   | detSpec1 | 0x0                          |
-   +----------+------------------------------+
-   | detSpec2 | 0x0                          |
-   +----------+------------------------------+
-   | detSpec3 | e14a                         |
-   +----------+------------------------------+
-   | detSpec4 | Round Robin Interface Number |
-   +----------+------------------------------+
-
-
-Jungfrau
----------
-
-.. table:: Detector Specific Field
-
-   +----------+------------------------------+
-   | detSpec1 | Bunch Id [#]_                |
-   +----------+------------------------------+
-   | detSpec2 | 0                            |
-   +----------+------------------------------+
-   | detSpec3 | DAQ info                     |
-   +----------+------------------------------+
-   | detSpec4 | 0                            |
-   +----------+------------------------------+
-
-
-.. table:: DAQ Info Field
-
-   +----------+--------------------+----------------------------------------------+
-   |   Bits   |       Name         |   Description                                |
-   +----------+--------------------+-----+----------------------------------------+
-   | 0        | High gain          |  1  | High Gain enabled                      |
-   |          |                    +-----+----------------------------------------+
-   |          |                    |  0  | High Gain disabled                     |
-   +----------+--------------------+-----+----------------------------------------+
-   | 1        | Fix gain stage 1   |  1  | Gain stage 1 fixed. The switch that    |
-   |          |                    |     | selects the gains stage 1 is active all|
-   |          |                    |     | the time.                              |
-   |          |                    +-----+----------------------------------------+
-   |          |                    |  0  | Gain stage 1 unset. The switch that    |
-   |          |                    |     | selects the gains stage 1 is inactive  |
-   |          |                    |     | all the time.                          |
-   +----------+--------------------+-----+----------------------------------------+
-   | 2        | Fix gain stage 2   |  1  | Gain stage 2 fixed. The switch that    |
-   |          |                    |     | selects the gains stage 2 is active all|
-   |          |                    |     | the time.                              |
-   |          |                    +-----+----------------------------------------+
-   |          |                    |  0  | Gain stage 2 unset. The switch that    |
-   |          |                    |     | selects the gains stage 2 is inactive  |
-   |          |                    |     | all the time.                          |
-   +----------+--------------------+-----+----------------------------------------+
-   | 4        | Comparator reset   |  1  | On-chip comparator in reset state.     | 
-   |          |                    |     | Dynamic-gain switching is therefore    |
-   |          |                    |     | disabled.                              |
-   |          |                    +-----+----------------------------------------+
-   |          |                    |  0  | On-chip comparator active.             |
-   +----------+--------------------+-----+-----+-----+----------------------------+
-   | 7-5      | Jungfrau chip      |Bit 7|Bit 6|Bit 5| Description                |
-   |          | version            +-----+-----+-----+----------------------------+
-   |          |                    | 0   |   0 |  0  | v1.0                       |
-   |          |                    +-----+-----+-----+----------------------------+
-   |          |                    | 0   |   0 |  1  | v1.1                       |
-   |          |                    +-----+-----+-----+----------------------------+
-   |          |                    | 0   |   1 |  X  | Reserved                   |
-   |          |                    +-----+-----+-----+----------------------------+
-   |          |                    | 1   |   X |  X  | Reserved                   |
-   +----------+--------------------+-----+-----+-----+----------------------------+
-   | 11-8     | Storage cell select|Storage cell used for this exposure. This     |
-   |          |                    |field defines the storage cell that was used  |
-   |          |                    |to acquire the data of this frame             |
-   +----------+--------------------+-----+----------------------------------------+
-   | 12       | Force switching    |  1  | Forced switching to gain stage 1 at the|
-   |          | to gain stage 1    |     | start of the exposure period.          |
-   |          |                    +-----+----------------------------------------+
-   |          |                    |  0  | Disabled forced gain switching to gain |
-   |          |                    |     | stage 1. Dynamic gain switching        |
-   |          |                    |     | conditions apply.                      |
-   +----------+--------------------+-----+----------------------------------------+
-   | 13       | Force switching    |  1  | Forced switching to gain stage 2 at the|
-   |          | to gain stage 2    |     | start of the exposure period.          |
-   |          |                    +-----+----------------------------------------+
-   |          |                    | 0   | Disabled forced gain switching to gain |
-   |          |                    |     | stage 2. Dynamic gain switching        |
-   |          |                    |     | conditions apply.                      |
-   +----------+--------------------+-----+-----+-----+----------------------------+
-   | 23-16    |  10-Gigabit event  |The 8-bit event code contains value of the    |
-   |          |  code              |event received over the 10 GbE interface by   |
-   |          |                    |JUNGFRAU detector at the moment of the frame  |
-   |          |                    |acquisition.                                  |
-   +----------+--------------------+-----+----------------------------------------+
-   | 31       | External input flag|  1  | External input flag detected in the    |
-   |          |                    |     | last exposure.                         |
-   |          |                    +-----+----------------------------------------+
-   |          |                    |  0  | External input flag not detected in the|
-   |          |                    |     | last exposure.                         |
-   +----------+--------------------+-----+----------------------------------------+
-
-
-
-Gotthard2
-----------
-
-.. table:: Detector Specific Field
-
-   +----------+------------------------------+
-   | detSpec1 | Train Id [#]_                |
-   +----------+------------------------------+
-   | detSpec2 | Bunch Id [#]_                |
-   +----------+------------------------------+
-   | detSpec3 | 0                            |
-   +----------+------------------------------+
-   | detSpec4 | 0                            |
-   +----------+------------------------------+
-
-
-Mythen3
-----------
-
-.. table:: Detector Specific Field
-
-   +----------+------------------------------+
-   | detSpec1 | 0                            |
-   +----------+------------------------------+
-   | detSpec2 | 0                            |
-   +----------+------------------------------+
-   | detSpec3 | 0                            |
-   +----------+------------------------------+
-   | detSpec4 | 0                            |
-   +----------+------------------------------+
-
-
-.. [#] **Bunch Id**: bunch identification number received by the detector at the moment of frame acquisition.
-.. [#] **Train Id**: train identification number received by the detector at the moment of frame acquisition.
-.. [#] **Bunch Id**: bunch identification number to identify every single exposure during a burst acquisition.

docs/src/udpheader.rst

@@ -1,125 +0,0 @@
-.. _detector udp header:
-
-Format
-=======
-
-The UDP data format for the packets consist of a common header for all detectors, followed by the data for that one packet.
-
-
-Current Version
----------------------------
-
-**v2.0 (slsDetectorPackage v7.0.0+)**
-
-.. table:: <---------------------------------------------------- 8 bytes per row --------------------------------------------->
-    :align: center
-    :widths: 30,30,30,15,15
-
-    +---------------------------------------------------------------+
-    |                          frameNumber                          |
-    +-------------------------------+-------------------------------+
-    |            expLength          |         packetNumber          |
-    +-------------------------------+-------------------------------+
-    |                         **detSpec1**                          |
-    +---------------------------------------------------------------+
-    |                           timestamp                           |
-    +---------------+---------------+---------------+---------------+
-    |     modId     |      row      |     column    |  **detSpec2** |
-    +---------------+---------------+---------------+-------+-------+
-    |          **detSpec3**         |  **detSpec4** |detType|version|
-    +-------------------------------+---------------+-------+-------+
-
-
-.. note :: 
-
-    Since there is no difference in the format of the UDP header from the detector
-    from the previous version (v2.0), the version number stays the same.
-    
-    Only the struture member names have changed in sls_detector_defs.h
-
-
-
-Description
-------------
-
-* **Detector specific field** descriptions are found :ref:`here<detector specific fields>`.
-
-* **frameNumber**: framenumber to which the current packet belongs to.
-
-* **expLength**: measured exposure time of the frame in tenths of microsecond. It is instead the sub frame number for Eiger.
-
-* **packetNumber**: packet number of the frame to which the current data belongs to.
-
-* **timestamp**: time measured at the start of frame exposure since the start of the current measurement. It is expressed in tenths of microsecond.
-
-* **modId**: module ID picked up from det_id_[detector type].txt on the detector cpu.
-
-* **row**: row position of the module in the detector system. It is calculated by the order of the module in hostname command, as well as the detsize command.
-
-* **column**: column position of the module in the detector system.  It is calculated by the order of the module in hostname command, as well as the detsize command.
-
-* **detType**: detector type from enum of detectorType in the package.
-
-* **version**: current version of the detector header (0x2).
-
-
-Detector Enum
---------------
-
-    ================    ========
-    Detector Type        Value
-    ================    ========
-    GENERIC             0
-    EIGER               1
-    GOTTHARD            2    
-    JUNGFRAU            3    
-    CHIPTESTBOARD       4        
-    MOENCH              5
-    MYTHEN3             6
-    GOTTHARD2           7    
-    ================    ========
-
-
-
-Previous Versions
------------------
-**v2.0 (Package v4.0.0 -  6.x.x)**
-
-.. table:: <---------------------------------------------------- 8 bytes ---------------------------------------------------->
-    :align: center
-    :widths: 30,30,30,15,15
-
-    +---------------------------------------------------------------+
-    |                          frameNumber                          |
-    +-------------------------------+-------------------------------+
-    |            expLength          |         packetNumber          |
-    +-------------------------------+-------------------------------+
-    |                            bunchid                            |
-    +---------------------------------------------------------------+
-    |                           timestamp                           |
-    +---------------+---------------+---------------+---------------+
-    |     modId     |    **row**    |   **column**  |  **reserved** |
-    +---------------+---------------+---------------+-------+-------+
-    |             debug             |  roundRNumber |detType|version|
-    +-------------------------------+---------------+-------+-------+
-
-**v1.0 (Package v3.0.0 -  3.1.5)**
-
-.. table:: <---------------------------------------------------- 8 bytes ---------------------------------------------------->
-    :align: center
-    :widths: 30,30,30,15,15
-
-    +---------------------------------------------------------------+
-    |                          frameNumber                          |
-    +-------------------------------+-------------------------------+
-    |            expLength          |         packetNumber          |
-    +-------------------------------+-------------------------------+
-    |                            bunchid                            |
-    +---------------------------------------------------------------+
-    |                           timestamp                           |
-    +---------------+---------------+---------------+---------------+
-    |     modId     |    xCoord     |     yCoord    |    zCoord     |
-    +---------------+---------------+---------------+-------+-------+
-    |             debug             |  roundRNumber |detType|version|
-    +-------------------------------+---------------+-------+-------+
-

docs/src/virtualserver.rst

@@ -1,158 +0,0 @@
-.. _Virtual Detector Servers:
-Simulators
-===========
-
-Compilation
------------
-
-* Using CMake, turn on the option 
-    .. code-block:: bash  
-        
-        SLS_USE_SIMULATOR=ON
-
-* Using cmk.sh script,
-     .. code-block:: bash  
-        
-        ./cmk.sh -bsj9 # option -s is for simulator
-
-
-Binaries
-^^^^^^^^
-    .. code-block:: bash  
-
-        eigerDetectorServer_virtual
-        jungfrauDetectorServer_virtual
-        gotthardDetectorServer_virtual
-        gotthard2DetectorServer_virtual
-        mythen3DetectorServer_virtual
-        moenchDetectorServer_virtual
-        ctbDetectorServer_virtual
-
-
-Arguments
----------
-
-The arguments are the same as the :ref:`normal server arguments<Detector Server Arguments>`.
-
-When using multiple modules, use different ports for each virtual server.
-    .. code-block:: bash  
-
-        # will start control server at port 1912 and stop server at port 1913
-        jungfrauDetectorServer --port 1912 &
-
-        # will start second control server at port 1914 and stop server at port 1915
-        jungfrauDetectorServer --port 1914 &
-
-
-Client
-------
-
-.. code-block:: bash  
-
-    # hostname should include the port (if not default)
-    sls_detector_put hostname localhost:1912+localhost:1914+
-
-    # or use virtual command, instead of hostname
-    # connects to 2 servers at localhost 
-    # (control servers: 1912, 1914; stop servers: 1913, 1915)
-    sls_detector_put virtual 2 1912 
-
-Use the same in the config file.
-Detector API has a method 'isVirtualDetectorServer' to check if on-board detector server is virtual.
-
-
-Sample Config file
-^^^^^^^^^^^^^^^^^^
-There are sample config files for each detector in slsDetectorPackage/examples folder.
-
-For a Single Module (Basic)
-    .. code-block:: bash  
-
-        hostname localhost
-        rx_hostname localhost
-        udp_dstip auto
-
-
-For a Single Module (With Options)
-    .. code-block:: bash  
-
-        # connects to control port 1912
-        hostname localhost:1912+
-
-        # connects to receiver at ports 2012
-        rx_hostname mpc1922:2012+
-
-        # sets destination udp ports (not needed, default is 50001)
-        udp_dstport 50012
-
-        # source udp ips must be same subnet at destintaion udp ips
-        # takes the same ip as hostname
-        udp_srcip auto
-
-        # destination udp ip picked up from rx_hostname (if auto)
-        udp_dstip auto
-
-        # set file path
-        fpath /tmp
-
-For Multiple Modules
-    .. code-block:: bash  
-
-        # connects to control ports 1912, 1914 and stop ports 1913, 1915
-        virtual 2 1912
-        # or hostname localhost:1912+localhost:1914+
-
-        # increasing receiver tcp ports (multi detector command)
-        rx_tcpport 2012
-
-        # connects to reciever at port 2012 and 2013
-        rx_hostname mpc1922
-
-        # sets increasing destination udp ports
-        udp_dstport 50012
-
-        # source udp ips must be same subnet at destintaion udp ips
-        0:udp_srcip 192.168.1.112
-        1:udp_srcip 192.168.1.114
-
-        # destination udp ip picked up from rx_hostname (if auto)
-        udp_dstip auto
-
-        # set file path
-        fpath /tmp
-
-Receivers
-----------
-Same as if you would use an actual detector
-
-For a Single Module
-    .. code-block:: bash  
-
-        slsReceiver -t2012
-
-
-For Multiple Modules
-    .. code-block:: bash  
-
-        # slsMultiReceiver [starting port] [number of receivers] [print each frame header for debugging]
-        slsMultiReceiver 2012 2 0 
-
-Gui
-----
-| Same as if you would use an actual detector.
-| Compile with SLS_USE_GUI=ON in cmake or -g option in cmk.sh script.
-
-.. code-block:: bash  
-
-    slsDetectorGui
-
-Limitations
------------
-
-#. Data coming out of virtual server is fake. 
-
-#. A stop will stop the virtual acquisition only at the start of every new frame.
-
-#. Triggers are counted as number of virtual frames. trigger command to send a software trigger (Mythen3 & Eiger) is not implemented in virtual server.
-
-#. firmware version and serial number will give 0.

docs/static/extra.css

@@ -1,4 +0,0 @@
-/* override table no-wrap */
-.wy-table-responsive table td, .wy-table-responsive table th {
-    white-space: normal;
-}

evalVersionVariables.sh

@@ -0,0 +1,22 @@
+GITREPO1='git remote -v'
+GITREPO2=" | grep \"fetch\" | cut -d' ' -f1"
+BRANCH1='git branch -v'
+BRANCH2=" | grep '*' | cut -d' ' -f2"
+REPUID1='git log --pretty=format:"%H" -1'
+AUTH1_1='git log --pretty=format:"%cn" -1'
+AUTH1_2=" | cut -d' ' -f1"
+AUTH2_1='git log --pretty=format:"%cn" -1'
+AUTH2_2=" | cut -d' ' -f2"
+FOLDERREV1='git log --oneline . '   #used for all the individual server folders
+FOLDERREV2=" | wc -l"  #used for all the individual server folders
+REV1='git log --oneline  '
+REV2=" | wc -l"
+
+GITREPO=`eval $GITREPO1  $GITREPO2`
+BRANCH=`eval $BRANCH1  $BRANCH2`
+REPUID=`eval $REPUID1`
+AUTH1=`eval $AUTH1_1  $AUTH1_2`
+AUTH2=`eval $AUTH2_1  $AUTH2_2`
+REV=`eval $REV1  $REV2`
+FOLDERREV=`eval $FOLDERREV1  $FOLDERREV2`
+

examples/badchannel.txt

@@ -1,6 +0,0 @@
-0
-10, 30
-40:45 50:52
-1279
-# all bad channels are applied for all counters in deector
-

examples/eiger_10Gb.config

@@ -1,43 +1,33 @@
-# detetctor geometry, long side of the module first
-detsize 1024 512 
-
-# detector hostname for controls
+detsizechan 1024 512 
+#detetctor geometry, long side of the module first
 hostname beb059+beb058+ 
+#1Gb detector hostname for controls
 
-# increasing receiver tcp port (multi detector command)
-rx_tcpport 1991
+0:rx_tcpport 1991 
+#tcpport for the first halfmodule                 
+0:rx_udpport 50011 
+#udp port first quadrant, first halfmodule       
+0:rx_udpport2 50012 
+#udp port second quadrant, first halfmodule       
+0:rx_udpip 10.0.30.210 
+#udp IP of the receiver over 10Gb              
+0:detectorip 10.0.30.100 
+#first half module 10 Gb IP 
+
+1:rx_tcpport 1992 
+#tcpport for the second halfmodule                  
+1:rx_udpport 50013 
+#udp port first quadrant, second halfmodule     
+1:rx_udpport2 50014 
+#udp port second quadrant, second halfmodule  
+1:rx_udpip 10.0.40.210  
+#udp IP of the receiver over 10Gb, 
+#can be the same or different from 0:rx_udpip                                   
+1:detectorip 10.0.40.101 
+#second half module 10 Gb IP 
 
-# 1Gb receiver pc hostname to configure receiver
 rx_hostname x12sa-vcons 
+#1Gb receiver pc hostname
 
-# or 1Gb receiver pc hostname with tcp port to configure receiver
-#rx_hostname x12sa-vcons:1991+x12sa-vcons:1992
-
-# increasing udp destination ports for all half modules
-udp_dstport 50011
-
-# udp port first quadrant, first halfmodule         
-#0:udp_dstport 50011 
-# udp port second quadrant, first halfmodule       
-#0:udp_dstport2 50012 
-# udp port first quadrant, second halfmodule       
-#1:udp_dstport 50013 
-# udp port second quadrant, second halfmodule  
-#1:udp_dstport2 50014 
-    
-# udp IP of the receiver over 10Gb              
-0:udp_dstip 10.0.30.210 
-
-# first half module 10 Gb IP (same subnet as 0:udp_dstip)
-0:udp_srcip 10.0.30.100 
-
-# udp IP of the receiver over 10Gb, 
-1:udp_dstip 10.0.40.210  
-
-# second half module 10 Gb IP 
-# can be the same or different from 0:rx_udpip 
-# butsame subnet as 1:udp_dstip                              
-1:udp_srcip 10.0.40.101 
-
-# output directory
-fpath /sls/X12SA/data/x12saop/Data10/Eiger0.5M
+outdir /sls/X12SA/data/x12saop/Data10/Eiger0.5M
+threaded 1

examples/eiger_1Gb.config

@@ -1,26 +1,24 @@
-# detetctor geometry, long side of the module first
-detsize 1024 512 
-
-# detector hostname for controls
+detsizechan 1024 512 
+#detetctor geometry, long side of the module first
 hostname beb059+beb058+ 
+#1Gb detector hostname for controls
 
-# increasing receiver tcp port (multi detector command)
-rx_tcpport 1991
-
-# 1Gb receiver pc hostname to configure receiver
-rx_hostname x12sa-vcons
-
-# increasing udp destination ports for all half modules
-udp_dstport 50011
-
-# udp port first quadrant, first halfmodule         
-#0:udp_dstport 50011 
+0:rx_tcpport 1991 
+#tcpport for the first halfmodule                 
+0:rx_udpport 50011 
+#udp port first quadrant, first halfmodule         
+0:rx_udpport2 50012 
 #udp port second quadrant, first halfmodule       
-#0:udp_dstport2 50012 
-# udp port first quadrant, second halfmodule       
-#1:udp_dstport 50013 
-# udp port second quadrant, second halfmodule  
-#1:udp_dstport2 50014 
 
-# output directory
-fpath /sls/X12SA/data/x12saop/Data10/Eiger0.5M
+1:rx_tcpport 1992 
+#tcpport for the second halfmodule               
+1:rx_udpport 50013 
+#udp port first quadrant, second halfmodule       
+1:rx_udpport2 50014 
+#udp port second quadrant, second halfmodule  
+    
+rx_hostname x12sa-vcons 
+#1Gb receiver pc hostname
+
+outdir /sls/X12SA/data/x12saop/Data10/Eiger0.5M
+threaded 1

examples/gotthard.config

@@ -1,12 +1,27 @@
-# detector hostname
 hostname bchip007
 
-# receiver pc hostname of 1Gb IP of the machine
-rx_hostname my_receiver_hostname
-
-# output directory
-fpath  /bigRAID/datadir_gotthard/rec_test_data
-
-# high voltage
-highvoltage 120
+#0:port 1952
+#0:stopport 1953
+#0:rx_tcpport 1956 must also have this in receiver config file
+0:angdir 1.000000
+0:moveflag 0.000000
+0:extsig:0 off
+#0:detectorip 129.129.202.9
+0:detectormac 00:aa:bb:cc:dd:ee
+0:rx_udpport 50004
+0:rx_udpip 129.129.202.98
+0:rx_hostname pc6898
+0:outdir /bigRAID/datadir_gotthard/rec_test_data
+0:vhighvoltage 120
+master -1
+sync none
+outdir /bigRAID/datadir_gotthard/rec_test_data
+headerbefore none
+headerafter none
+headerbeforepar none
+headerafterpar none
+badchannels none
+angconv none
+globaloff 0.000000
+binsize 0.001000
 

examples/gotthard2_veto_file.txt

@@ -1,129 +0,0 @@
-#Gain index    ADU value (12 bit)
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655
-1               3655

examples/gotthard2_veto_photon.txt

@@ -1,129 +1,132 @@
-#G0 pedestal    G1 pedestal    G2 pedestal    G0 gain    G1 gain    G2 gain     #G1 Energy      #G2 Energy
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
-100             100             100             10        1             0.1     300	            7000
+#G1 Energy #G2 Energy
+300	7000
+
+#G0 pedestal    G1 pedestal    G2 pedestal    G0 gain    G1 gain    G2 gain (for every channel) ADU
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1
+100        100        100        10        1        0.1