readoutspeed in rx master file and other master file inconsistencies (#1245)

readout speed added to json and h5 master files.
Also fixed master file inconsistencies

Sserver binaries
- update server binaries because readoutspeed needs to be sent to receiver with rx_hostname command

API
- added const to Detector class set/getburstmode

Python
- updated python bindings (burstmode const and roi arguments)

Cmd generation
- added pragma once in Caller.in.h as Caller is included in test files

m3: num channels due to #counters < 3
* workaround for m3 for messed up num channels (client always assumes all counters enabled and adds them to num channels), fix for hdf5

g2: exptime master file inconsistency
- exptime didnt match because of round of when setting burst mode (sets to a different clk divider)
- so updating actual time for all timers (exptime, period, subexptime etc, )  in Module class, get timer values from detector when setting it and then send to receiver to write in master file

ctb image size incorrect:
-  write actual size into master file and not the reserved size (digital reduces depending on dbit list and dbit offset)
- added a calculate ctb image size free function in generalData.h that is used there as well as for the tests.


master file inconsistencies
- refactored master attributes writing using templates
-    names changed to keep it consistent between json and hdf5 master file (Version, Pixels, Exposure Times, GateDelays, Acquisition Period, etc.)
-  datatypes changed to keep it simple where possible: imageSize, dynamicRange, tengiga, quad, readnrows, analog, analogsamples, digital, digitalsamples, dbitreorder, dbitoffset, transceivermask, transeiver, transceiversamples, countermask, gates =>int
- replacing "toString" with arrays, objects etc for eg for scan, rois, etc.
- json header always written (empty dataset or empty brackets)
- hdf5 needs const char* so have to convert strings to it, but taking care that strings exist prior to push_back
- master attributes (redundant string literals->error prone

tests for master file
- suppressed deprecated functions in rapidjson warnings just for the tests
- added slsREceiverSoftware/src to allow access to receiver_defs.h to test binary/hdf5 version
- refactored acquire tests by moving all the acquire tests from individual detector type files to a single one=test-Caller-acquire.cpp
- set some default settings (loadBasicSettings) for a basic acquire at load config part for the test_simulator python scripts. so minimum number of settings for detector to be set for any acquire tests.
- added tests to test master files for json and hdf5= test-Caller-master-attributes.cpp
- added option to add '-m' markers for tests using test_simulator python script

slsDetectorSoftware/tests/Caller/test-Caller-rx.cpp

@@ -738,43 +738,19 @@ TEST_CASE("rx_roi", "[.cmdcall]") {
         // check master file creation
         // TODO: check roi in master file
         {
-            auto prev_write = det.getFileWrite().tsquash(
-                "inconsistent file write values in test");
-            auto prev_path = det.getFilePath().tsquash(
-                "inconsistent file path values in test");
-            auto prev_format = det.getFileFormat().tsquash(
-                "inconsistent file format values in test");
-            auto prev_index = det.getAcquisitionIndex().tsquash(
-                "inconsistent file index values in test");
-            auto prev_fname = det.getFileNamePrefix().tsquash(
-                "inconsistent file name prefix values in test");
-
-            det.setFileWrite(true);
-            det.setFilePath("/tmp");
-            det.setFileNamePrefix("test");
-
-            det.setAcquisitionIndex(0);
-            det.setFileFormat(defs::BINARY);
-            REQUIRE_NOTHROW(caller.call("acquire", {}, -1, PUT));
-            std::string file_path = "/tmp/test_master_0.json";
-            REQUIRE(std::filesystem::exists(file_path) == true);
+            create_files_for_acquire(det, caller);
+            testFileInfo file_info;
+            std::string master_file_prefix =
+                file_info.getMasterFileNamePrefix();
 
+            std::string fname = master_file_prefix + ".json";
+            REQUIRE(std::filesystem::exists(fname) == true);
 #ifdef HDF5C
-            det.setAcquisitionIndex(0);
-            det.setFileFormat(defs::HDF5);
-            REQUIRE_NOTHROW(caller.call("acquire", {}, -1, PUT));
-            file_path = "/tmp/test_master_0.h5";
-            REQUIRE(std::filesystem::exists(file_path) == true);
-            file_path = "/tmp/test_virtual_0.h5";
-            REQUIRE(std::filesystem::exists(file_path) == true);
+            fname = master_file_prefix + ".h5";
+            REQUIRE(std::filesystem::exists(fname) == true);
+            fname = file_info.getVirtualFileName();
+            REQUIRE(std::filesystem::exists(fname) == true);
 #endif
-
-            det.setFileWrite(prev_write);
-            if (!prev_path.empty())
-                det.setFilePath(prev_path);
-            det.setFileFormat(prev_format);
-            det.setAcquisitionIndex(prev_index);
-            det.setFileNamePrefix(prev_fname);
         }
 
         for (int i = 0; i != det.size(); ++i) {
@@ -801,7 +777,11 @@ TEST_CASE("rx_clearroi", "[.cmdcall]") {
             REQUIRE(oss.str() == "rx_clearroi successful\n");
         }
         for (int i = 0; i != det.size(); ++i) {
-            det.setRxROI(prev_val);
+            if (prev_val.size() == 1 && prev_val[0].completeRoi()) {
+                det.clearRxROI();
+            } else {
+                det.setRxROI(prev_val);
+            }
         }
     }
 }