mirror of
https://github.com/slsdetectorgroup/slsDetectorPackage.git
synced 2025-06-12 21:07:13 +02:00
energyCalibration updated with Sophie's version
This commit is contained in:
@ -0,0 +1,47 @@
|
||||
#module add CBFlib/0.9.5
|
||||
INCDIR=-I. -I../ -I../interpolations -I../interpolations/etaVEL -I../dataStructures -I../../slsSupportLib/include/ -I../../slsReceiverSoftware/include/
|
||||
|
||||
LDFLAG= ../tiffIO.cpp -L/usr/lib64/ -lpthread -lm -lstdc++ -pthread -lrt -ltiff -O3 -std=c++11
|
||||
|
||||
MAIN=jungfrauClusterFinder.cpp
|
||||
|
||||
|
||||
all: jungfrauClusterFinder jungfrauMakeEta jungfrauInterpolation jungfrauNoInterpolation jungfrauPhotonCounter jungfrauAnalog
|
||||
|
||||
|
||||
|
||||
jungfrauClusterFinder: jungfrauClusterFinder.cpp $(INCS) clean
|
||||
g++ -o jungfrauClusterFinder jungfrauClusterFinder.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DSAVE_ALL
|
||||
|
||||
|
||||
jungfrauClusterFinderHighZ: jungfrauClusterFinder.cpp $(INCS) clean
|
||||
g++ -o jungfrauClusterFinderHighZ jungfrauClusterFinder.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DSAVE_ALL -DHIGHZ
|
||||
|
||||
|
||||
|
||||
|
||||
jungfrauMakeEta: jungfrauInterpolation.cpp $(INCS) clean
|
||||
g++ -o jungfrauMakeEta jungfrauInterpolation.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DFF
|
||||
|
||||
jungfrauInterpolation: jungfrauInterpolation.cpp $(INCS) clean
|
||||
g++ -o jungfrauInterpolation jungfrauInterpolation.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF)
|
||||
|
||||
jungfrauNoInterpolation: jungfrauNoInterpolation.cpp $(INCS) clean
|
||||
g++ -o jungfrauNoInterpolation jungfrauNoInterpolation.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF)
|
||||
|
||||
jungfrauPhotonCounter: jungfrauPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o jungfrauPhotonCounter jungfrauPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER
|
||||
|
||||
jungfrauAnalog: jungfrauPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o jungfrauAnalog jungfrauPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER -DANALOG
|
||||
|
||||
jungfrauPhotonCounterHighZ: jungfrauPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o jungfrauPhotonCounterHighZ jungfrauPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER -DHIGHZ
|
||||
|
||||
jungfrauAnalogHighZ: jungfrauPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o jungfrauAnalogHighZ jungfrauPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER -DANALOG -DHIGHZ
|
||||
|
||||
clean:
|
||||
rm -f jungfrauClusterFinder jungfrauMakeEta jungfrauInterpolation jungfrauNoInterpolation jungfrauPhotonCounter jungfrauAnalog
|
||||
|
||||
|
||||
@ -0,0 +1,47 @@
|
||||
#module add CBFlib/0.9.5
|
||||
INCDIR=-I. -I../ -I../interpolations -I../interpolations/etaVEL -I../dataStructures -I../../slsSupportLib/include/ -I../../slsReceiverSoftware/include/
|
||||
|
||||
LDFLAG= ../tiffIO.cpp -L/usr/lib64/ -lpthread -lm -lstdc++ -pthread -lrt -ltiff -O3 -std=c++11
|
||||
|
||||
MAIN=moench03ClusterFinder.cpp
|
||||
|
||||
|
||||
all: moenchClusterFinder moenchMakeEta moenchInterpolation moenchNoInterpolation moenchPhotonCounter moenchAnalog
|
||||
|
||||
|
||||
|
||||
moenchClusterFinder: moench03ClusterFinder.cpp $(INCS) clean
|
||||
g++ -o moenchClusterFinder moench03ClusterFinder.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DSAVE_ALL -DNEWRECEIVER
|
||||
|
||||
|
||||
moenchClusterFinderHighZ: moench03ClusterFinder.cpp $(INCS) clean
|
||||
g++ -o moenchClusterFinderHighZ moench03ClusterFinder.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DSAVE_ALL -DNEWRECEIVER -DHIGHZ
|
||||
|
||||
|
||||
|
||||
|
||||
moenchMakeEta: moench03Interpolation.cpp $(INCS) clean
|
||||
g++ -o moenchMakeEta moench03Interpolation.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DFF
|
||||
|
||||
moenchInterpolation: moench03Interpolation.cpp $(INCS) clean
|
||||
g++ -o moenchInterpolation moench03Interpolation.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF)
|
||||
|
||||
moenchNoInterpolation: moench03NoInterpolation.cpp $(INCS) clean
|
||||
g++ -o moenchNoInterpolation moench03NoInterpolation.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF)
|
||||
|
||||
moenchPhotonCounter: moenchPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o moenchPhotonCounter moenchPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER
|
||||
|
||||
moenchAnalog: moenchPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o moenchAnalog moenchPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER -DANALOG
|
||||
|
||||
moenchPhotonCounterHighZ: moenchPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o moenchPhotonCounterHighZ moenchPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER -DHIGHZ
|
||||
|
||||
moenchAnalogHighZ: moenchPhotonCounter.cpp $(INCS) clean
|
||||
g++ -o moenchAnalogHighZ moenchPhotonCounter.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWRECEIVER -DANALOG -DHIGHZ
|
||||
|
||||
clean:
|
||||
rm -f moenchClusterFinder moenchMakeEta moenchInterpolation moenchNoInterpolation moenchPhotonCounter moenchAnalog
|
||||
|
||||
|
||||
23
slsDetectorCalibration/jungfrauExecutables/Makefile.zmq
Normal file
23
slsDetectorCalibration/jungfrauExecutables/Makefile.zmq
Normal file
@ -0,0 +1,23 @@
|
||||
|
||||
INCDIR= -I. -I../dataStructures ../tiffIO.cpp -I../ -I../interpolations/ -I../../slsSupportLib/include/ -I../../slsReceiverSoftware/include/ -I../../libs/rapidjson/
|
||||
LDFLAG= -L/usr/lib64/ -lpthread -lm -lstdc++ -lzmq -pthread -lrt -ltiff -O3 -std=c++11 -Wall -L../../build/bin/ -lSlsSupport
|
||||
#-L../../bin -lhdf5 -L.
|
||||
|
||||
#DESTDIR?=../bin
|
||||
|
||||
all: moenchZmqProcess moenchZmq04Process
|
||||
#moenchZmqProcessCtbGui
|
||||
|
||||
moenchZmqProcess: moenchZmqProcess.cpp clean
|
||||
g++ -o moenchZmqProcess moenchZmqProcess.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWZMQ -DINTERP
|
||||
|
||||
moenchZmq04Process: moenchZmqProcess.cpp clean
|
||||
g++ -o moench04ZmqProcess moenchZmqProcess.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWZMQ -DINTERP -DMOENCH04
|
||||
|
||||
#moenchZmqProcessCtbGui: moenchZmqProcess.cpp clean
|
||||
# g++ -o moenchZmqProcessCtbGui moenchZmqProcess.cpp $(LDFLAG) $(INCDIR) $(LIBHDF5) $(LIBRARYCBF) -DNEWZMQ -DINTERP -DCTBGUI
|
||||
|
||||
clean:
|
||||
rm -f moenchZmqProcess
|
||||
|
||||
|
||||
BIN
slsDetectorCalibration/jungfrauExecutables/jungfrauClusterFinder
Executable file
BIN
slsDetectorCalibration/jungfrauExecutables/jungfrauClusterFinder
Executable file
Binary file not shown.
@ -0,0 +1,161 @@
|
||||
//#include "sls/ansi.h"
|
||||
#include <iostream>
|
||||
|
||||
|
||||
//#include "moench03T1ZmqData.h"
|
||||
#include "jungfrauHighZSingleChipData.h"
|
||||
|
||||
|
||||
#include "multiThreadedAnalogDetector.h"
|
||||
#include "singlePhotonDetector.h"
|
||||
|
||||
#include <stdio.h>
|
||||
#include <map>
|
||||
#include <fstream>
|
||||
#include <sys/stat.h>
|
||||
|
||||
#include <ctime>
|
||||
using namespace std;
|
||||
|
||||
|
||||
int main(int argc, char *argv[]) {
|
||||
|
||||
|
||||
if (argc<6) {
|
||||
cout << "Usage is " << argv[0] << "indir outdir fname runmin runmax " << endl;
|
||||
return 1;
|
||||
}
|
||||
int p=10000;
|
||||
int fifosize=1000;
|
||||
int nthreads=1;
|
||||
int nsubpix=25;
|
||||
int etabins=nsubpix*10;
|
||||
double etamin=-1, etamax=2;
|
||||
int csize=3;
|
||||
int nx=400, ny=400;
|
||||
int save=1;
|
||||
int nsigma=5;
|
||||
int nped=1000;
|
||||
int ndark=100;
|
||||
int ok;
|
||||
int iprog=0;
|
||||
|
||||
|
||||
|
||||
|
||||
jungfrauHighZSingleChipData *decoder=new jungfrauHighZSingleChipData();
|
||||
|
||||
decoder->getDetectorSize(nx,ny);
|
||||
cout << "nx " << nx << " ny " << ny << endl;
|
||||
|
||||
//moench03T1ZmqData *decoder=new moench03T1ZmqData();
|
||||
singlePhotonDetector *filter=new singlePhotonDetector(decoder,csize, nsigma, 1, 0, nped, 200);
|
||||
// char tit[10000];
|
||||
cout << "filter " << endl;
|
||||
|
||||
|
||||
|
||||
|
||||
int* image;
|
||||
filter->newDataSet();
|
||||
|
||||
|
||||
int ff, np;
|
||||
int dsize=decoder->getDataSize();
|
||||
cout << " data size is " << dsize;
|
||||
|
||||
|
||||
char data[dsize];
|
||||
|
||||
ifstream filebin;
|
||||
char *indir=argv[1];
|
||||
char *outdir=argv[2];
|
||||
char *fformat=argv[3];
|
||||
int runmin=atoi(argv[4]);
|
||||
int runmax=atoi(argv[5]);
|
||||
|
||||
char fname[10000];
|
||||
char outfname[10000];
|
||||
char imgfname[10000];
|
||||
char pedfname[10000];
|
||||
char fn[10000];
|
||||
|
||||
std::time_t end_time;
|
||||
|
||||
FILE *of=NULL;
|
||||
cout << "input directory is " << indir << endl;
|
||||
cout << "output directory is " << outdir << endl;
|
||||
cout << "fileformat is " << fformat << endl;
|
||||
|
||||
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
|
||||
char* buff;
|
||||
multiThreadedAnalogDetector *mt=new multiThreadedAnalogDetector(filter,nthreads,fifosize);
|
||||
|
||||
|
||||
mt->setDetectorMode(ePhotonCounting);
|
||||
mt->setFrameMode(eFrame);
|
||||
mt->StartThreads();
|
||||
mt->popFree(buff);
|
||||
|
||||
|
||||
cout << "mt " << endl;
|
||||
|
||||
int ifr=0;
|
||||
|
||||
|
||||
for (int irun=runmin; irun<runmax; irun++) {
|
||||
sprintf(fn,fformat,irun);
|
||||
sprintf(fname,"%s/%s.raw",indir,fn);
|
||||
sprintf(outfname,"%s/%s.clust",outdir,fn);
|
||||
sprintf(imgfname,"%s/%s.tiff",outdir,fn);
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
cout << fname << " " << outfname << " " << imgfname << endl;
|
||||
filebin.open((const char *)(fname), ios::in | ios::binary);
|
||||
// //open file
|
||||
if (filebin.is_open()){
|
||||
of=fopen(outfname,"w");
|
||||
if (of) {
|
||||
mt->setFilePointer(of);
|
||||
// cout << "file pointer set " << endl;
|
||||
} else {
|
||||
cout << "Could not open "<< outfname << " for writing " << endl;
|
||||
mt->setFilePointer(NULL);
|
||||
return 1;
|
||||
}
|
||||
// //while read frame
|
||||
ff=-1;
|
||||
while (decoder->readNextFrame(filebin, ff, np,buff)) {
|
||||
|
||||
mt->pushData(buff);
|
||||
mt->nextThread();
|
||||
mt->popFree(buff);
|
||||
ifr++;
|
||||
if (ifr%10000==0) cout << ifr << " " << ff << endl;
|
||||
ff=-1;
|
||||
}
|
||||
cout << "--" << endl;
|
||||
filebin.close();
|
||||
while (mt->isBusy()) {;}//wait until all data are processed from the queues
|
||||
if (of)
|
||||
fclose(of);
|
||||
|
||||
mt->writeImage(imgfname);
|
||||
mt->clearImage();
|
||||
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
|
||||
} else
|
||||
cout << "Could not open "<< fname << " for reading " << endl;
|
||||
|
||||
|
||||
}
|
||||
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
@ -0,0 +1,237 @@
|
||||
//#include "sls/ansi.h"
|
||||
#include <iostream>
|
||||
|
||||
|
||||
//#include "moench03T1ZmqData.h"
|
||||
#ifdef NEWRECEIVER
|
||||
#ifndef RECT
|
||||
#include "moench03T1ReceiverDataNew.h"
|
||||
#endif
|
||||
|
||||
#ifdef RECT
|
||||
#include "moench03T1ReceiverDataNewRect.h"
|
||||
#endif
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
#ifdef CSAXS_FP
|
||||
#include "moench03T1ReceiverData.h"
|
||||
#endif
|
||||
#ifdef OLDDATA
|
||||
#include "moench03Ctb10GbT1Data.h"
|
||||
#endif
|
||||
|
||||
#ifdef REORDERED
|
||||
#include "moench03T1ReorderedData.h"
|
||||
#endif
|
||||
|
||||
// #include "interpolatingDetector.h"
|
||||
//#include "etaInterpolationPosXY.h"
|
||||
// #include "linearInterpolation.h"
|
||||
// #include "noInterpolation.h"
|
||||
#include "multiThreadedAnalogDetector.h"
|
||||
#include "singlePhotonDetector.h"
|
||||
//#include "interpolatingDetector.h"
|
||||
|
||||
#include <stdio.h>
|
||||
#include <map>
|
||||
#include <fstream>
|
||||
#include <sys/stat.h>
|
||||
|
||||
#include <ctime>
|
||||
using namespace std;
|
||||
|
||||
|
||||
int main(int argc, char *argv[]) {
|
||||
|
||||
|
||||
if (argc<6) {
|
||||
cout << "Usage is " << argv[0] << "indir outdir fname runmin runmax " << endl;
|
||||
return 1;
|
||||
}
|
||||
int p=10000;
|
||||
int fifosize=1000;
|
||||
int nthreads=1;
|
||||
int nsubpix=25;
|
||||
int etabins=nsubpix*10;
|
||||
double etamin=-1, etamax=2;
|
||||
int csize=3;
|
||||
int nx=400, ny=400;
|
||||
int save=1;
|
||||
int nsigma=5;
|
||||
int nped=1000;
|
||||
int ndark=100;
|
||||
int ok;
|
||||
int iprog=0;
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
#ifdef NEWRECEIVER
|
||||
#ifdef RECT
|
||||
cout << "Should be rectangular!" <<endl;
|
||||
#endif
|
||||
moench03T1ReceiverDataNew *decoder=new moench03T1ReceiverDataNew();
|
||||
cout << "RECEIVER DATA WITH ONE HEADER!"<<endl;
|
||||
#endif
|
||||
|
||||
#ifdef CSAXS_FP
|
||||
moench03T1ReceiverData *decoder=new moench03T1ReceiverData();
|
||||
cout << "RECEIVER DATA WITH ALL HEADERS!"<<endl;
|
||||
#endif
|
||||
|
||||
#ifdef OLDDATA
|
||||
moench03Ctb10GbT1Data *decoder=new moench03Ctb10GbT1Data();
|
||||
cout << "OLD RECEIVER DATA!"<<endl;
|
||||
#endif
|
||||
|
||||
#ifdef REORDERED
|
||||
moench03T1ReorderedData *decoder=new moench03T1ReorderedData();
|
||||
cout << "REORDERED DATA!"<<endl;
|
||||
#endif
|
||||
|
||||
|
||||
decoder->getDetectorSize(nx,ny);
|
||||
cout << "nx " << nx << " ny " << ny << endl;
|
||||
|
||||
//moench03T1ZmqData *decoder=new moench03T1ZmqData();
|
||||
singlePhotonDetector *filter=new singlePhotonDetector(decoder,csize, nsigma, 1, 0, nped, 200);
|
||||
// char tit[10000];
|
||||
cout << "filter " << endl;
|
||||
|
||||
|
||||
|
||||
// filter->readPedestals("/scratch/ped_100.tiff");
|
||||
// interp->readFlatField("/scratch/eta_100.tiff",etamin,etamax);
|
||||
// cout << "filter "<< endl;
|
||||
|
||||
|
||||
int size = 327680;////atoi(argv[3]);
|
||||
|
||||
int* image;
|
||||
//int* image =new int[327680/sizeof(int)];
|
||||
filter->newDataSet();
|
||||
|
||||
|
||||
int ff, np;
|
||||
int dsize=decoder->getDataSize();
|
||||
cout << " data size is " << dsize;
|
||||
|
||||
|
||||
char data[dsize];
|
||||
|
||||
ifstream filebin;
|
||||
char *indir=argv[1];
|
||||
char *outdir=argv[2];
|
||||
char *fformat=argv[3];
|
||||
int runmin=atoi(argv[4]);
|
||||
int runmax=atoi(argv[5]);
|
||||
|
||||
char fname[10000];
|
||||
char outfname[10000];
|
||||
char imgfname[10000];
|
||||
char pedfname[10000];
|
||||
// strcpy(pedfname,argv[6]);
|
||||
char fn[10000];
|
||||
|
||||
std::time_t end_time;
|
||||
|
||||
FILE *of=NULL;
|
||||
cout << "input directory is " << indir << endl;
|
||||
cout << "output directory is " << outdir << endl;
|
||||
cout << "fileformat is " << fformat << endl;
|
||||
|
||||
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
char* buff;
|
||||
multiThreadedAnalogDetector *mt=new multiThreadedAnalogDetector(filter,nthreads,fifosize);
|
||||
|
||||
|
||||
mt->setDetectorMode(ePhotonCounting);
|
||||
mt->setFrameMode(eFrame);
|
||||
mt->StartThreads();
|
||||
mt->popFree(buff);
|
||||
|
||||
|
||||
cout << "mt " << endl;
|
||||
|
||||
int ifr=0;
|
||||
|
||||
|
||||
for (int irun=runmin; irun<runmax; irun++) {
|
||||
sprintf(fn,fformat,irun);
|
||||
sprintf(fname,"%s/%s.raw",indir,fn);
|
||||
sprintf(outfname,"%s/%s.clust",outdir,fn);
|
||||
sprintf(imgfname,"%s/%s.tiff",outdir,fn);
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
cout << fname << " " << outfname << " " << imgfname << endl;
|
||||
filebin.open((const char *)(fname), ios::in | ios::binary);
|
||||
// //open file
|
||||
if (filebin.is_open()){
|
||||
of=fopen(outfname,"w");
|
||||
if (of) {
|
||||
mt->setFilePointer(of);
|
||||
// cout << "file pointer set " << endl;
|
||||
} else {
|
||||
cout << "Could not open "<< outfname << " for writing " << endl;
|
||||
mt->setFilePointer(NULL);
|
||||
return 1;
|
||||
}
|
||||
// //while read frame
|
||||
ff=-1;
|
||||
while (decoder->readNextFrame(filebin, ff, np,buff)) {
|
||||
// cout << "*"<<ifr++<<"*"<<ff<< endl;
|
||||
// cout << ff << " " << np << endl;
|
||||
// //push
|
||||
// for (int ix=0; ix<400; ix++)
|
||||
// for (int iy=0; iy<400; iy++) {
|
||||
// if (decoder->getChannel(buff, ix, iy)<3000 || decoder->getChannel(buff, ix, iy)>8000) {
|
||||
// cout << ifr << " " << ff << " " << ix << " " << iy << " " << decoder->getChannel(buff, ix, iy) << endl ;
|
||||
// }
|
||||
// }
|
||||
|
||||
mt->pushData(buff);
|
||||
// // //pop
|
||||
mt->nextThread();
|
||||
// // // cout << " " << (void*)buff;
|
||||
mt->popFree(buff);
|
||||
ifr++;
|
||||
if (ifr%10000==0) cout << ifr << " " << ff << endl;
|
||||
ff=-1;
|
||||
}
|
||||
cout << "--" << endl;
|
||||
filebin.close();
|
||||
// //close file
|
||||
// //join threads
|
||||
while (mt->isBusy()) {;}//wait until all data are processed from the queues
|
||||
if (of)
|
||||
fclose(of);
|
||||
|
||||
mt->writeImage(imgfname);
|
||||
mt->clearImage();
|
||||
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
|
||||
} else
|
||||
cout << "Could not open "<< fname << " for reading " << endl;
|
||||
|
||||
|
||||
}
|
||||
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
@ -0,0 +1,250 @@
|
||||
|
||||
#include "sls/ansi.h"
|
||||
#include <iostream>
|
||||
|
||||
//#include "moench03T1ZmqData.h"
|
||||
//#define DOUBLE_SPH
|
||||
//#define MANYFILES
|
||||
|
||||
#ifdef DOUBLE_SPH
|
||||
#include "single_photon_hit_double.h"
|
||||
#endif
|
||||
|
||||
#ifndef DOUBLE_SPH
|
||||
#include "single_photon_hit.h"
|
||||
#endif
|
||||
|
||||
//#include "etaInterpolationPosXY.h"
|
||||
#include "noInterpolation.h"
|
||||
#include "etaInterpolationPosXY.h"
|
||||
//#include "etaInterpolationCleverAdaptiveBins.h"
|
||||
//#include "etaInterpolationRandomBins.h"
|
||||
using namespace std;
|
||||
#define NC 400
|
||||
#define NR 400
|
||||
#define MAX_ITERATIONS (nSubPixels*100)
|
||||
|
||||
#define XTALK
|
||||
|
||||
int main(int argc, char *argv[]) {
|
||||
|
||||
#ifndef FF
|
||||
if (argc<9) {
|
||||
cout << "Wrong usage! Should be: "<< argv[0] << " infile etafile outfile runmin runmax ns cmin cmax" << endl;
|
||||
return 1;
|
||||
}
|
||||
#endif
|
||||
|
||||
#ifdef FF
|
||||
if (argc<7) {
|
||||
cout << "Wrong usage! Should be: "<< argv[0] << " infile etafile runmin runmax cmin cmax" << endl;
|
||||
return 1;
|
||||
}
|
||||
#endif
|
||||
int iarg=4;
|
||||
char infname[10000];
|
||||
char fname[10000];
|
||||
char outfname[10000];
|
||||
#ifndef FF
|
||||
iarg=4;
|
||||
#endif
|
||||
|
||||
#ifdef FF
|
||||
iarg=3;
|
||||
#endif
|
||||
int runmin=atoi(argv[iarg++]);
|
||||
int runmax=atoi(argv[iarg++]);
|
||||
cout << "Run min: " << runmin << endl;
|
||||
cout << "Run max: " << runmax << endl;
|
||||
|
||||
int nsubpix=4;
|
||||
#ifndef FF
|
||||
nsubpix=atoi(argv[iarg++]);
|
||||
cout << "Subpix: " << nsubpix << endl;
|
||||
#endif
|
||||
float cmin=atof(argv[iarg++]);
|
||||
float cmax=atof(argv[iarg++]);
|
||||
cout << "Energy min: " << cmin << endl;
|
||||
cout << "Energy max: " << cmax << endl;
|
||||
//int etabins=500;
|
||||
int etabins=1000;//nsubpix*2*100;
|
||||
double etamin=-1, etamax=2;
|
||||
//double etamin=-0.1, etamax=1.1;
|
||||
double eta3min=-2, eta3max=2;
|
||||
int quad;
|
||||
double sum, totquad;
|
||||
double sDum[2][2];
|
||||
double etax, etay, int_x, int_y;
|
||||
double eta3x, eta3y, int3_x, int3_y, noint_x, noint_y;
|
||||
int ok;
|
||||
int f0=-1;
|
||||
int ix, iy, isx, isy;
|
||||
int nframes=0, lastframe=-1;
|
||||
double d_x, d_y, res=5, xx, yy;
|
||||
int nph=0, badph=0, totph=0;
|
||||
FILE *f=NULL;
|
||||
|
||||
#ifdef DOUBLE_SPH
|
||||
single_photon_hit_double cl(3,3);
|
||||
#endif
|
||||
|
||||
#ifndef DOUBLE_SPH
|
||||
single_photon_hit cl(3,3);
|
||||
#endif
|
||||
|
||||
int nSubPixels=nsubpix;
|
||||
#ifndef NOINTERPOLATION
|
||||
eta2InterpolationPosXY *interp=new eta2InterpolationPosXY(NC, NR, nsubpix, etabins, etamin, etamax);
|
||||
//eta2InterpolationCleverAdaptiveBins *interp=new eta2InterpolationCleverAdaptiveBins(NC, NR, nsubpix, etabins, etamin, etamax);
|
||||
#endif
|
||||
#ifdef NOINTERPOLATION
|
||||
noInterpolation *interp=new noInterpolation(NC, NR, nsubpix);
|
||||
#endif
|
||||
|
||||
|
||||
|
||||
#ifndef FF
|
||||
#ifndef NOINTERPOLATION
|
||||
cout << "read ff " << argv[2] << endl;
|
||||
sprintf(fname,"%s",argv[2]);
|
||||
interp->readFlatField(fname);
|
||||
interp->prepareInterpolation(ok);//, MAX_ITERATIONS);
|
||||
#endif
|
||||
// return 0;
|
||||
#endif
|
||||
#ifdef FF
|
||||
cout << "Will write eta file " << argv[2] << endl;
|
||||
#endif
|
||||
|
||||
int *img;
|
||||
float *totimg=new float[NC*NR*nsubpix*nsubpix];
|
||||
for (ix=0; ix<NC; ix++) {
|
||||
for (iy=0; iy<NR; iy++) {
|
||||
for (isx=0; isx<nsubpix; isx++) {
|
||||
for (isy=0; isy<nsubpix; isy++) {
|
||||
totimg[ix*nsubpix+isx+(iy*nsubpix+isy)*(NC*nsubpix)]=0;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
#ifdef FF
|
||||
sprintf(outfname,argv[2]);
|
||||
#endif
|
||||
|
||||
int irun;
|
||||
for (irun=runmin; irun<runmax; irun++) {
|
||||
sprintf(infname,argv[1],irun);
|
||||
#ifndef FF
|
||||
sprintf(outfname,argv[3],irun);
|
||||
#endif
|
||||
|
||||
f=fopen(infname,"r");
|
||||
if (f) {
|
||||
cout << infname << endl;
|
||||
nframes=0;
|
||||
f0=-1;
|
||||
|
||||
while (cl.read(f)) {
|
||||
totph++;
|
||||
if (lastframe!=cl.iframe) {
|
||||
lastframe=cl.iframe;
|
||||
// cout << cl.iframe << endl;
|
||||
// f0=cl.iframe;
|
||||
if (nframes==0) f0=lastframe;
|
||||
nframes++;
|
||||
}
|
||||
//quad=interp->calcQuad(cl.get_cluster(), sum, totquad, sDum);
|
||||
quad=interp->calcEta(cl.get_cluster(), etax, etay, sum, totquad, sDum);
|
||||
if (sum>cmin && totquad/sum>0.8 && totquad/sum<1.2 && sum<cmax ) {
|
||||
nph++;
|
||||
// if (sum>200 && sum<580) {
|
||||
// interp->getInterpolatedPosition(cl.x,cl.y, totquad,quad,cl.get_cluster(),int_x, int_y);
|
||||
// #ifdef SOLEIL
|
||||
// if (cl.x>210 && cl.x<240 && cl.y>210 && cl.y<240) {
|
||||
// #endif
|
||||
#ifndef FF
|
||||
// interp->getInterpolatedPosition(cl.x,cl.y, cl.get_cluster(),int_x, int_y);
|
||||
interp->getInterpolatedPosition(cl.x,cl.y, etax, etay, quad,int_x, int_y);
|
||||
// cout <<"**************"<< endl;
|
||||
// cout << cl.x << " " << cl.y << " " << sum << endl;
|
||||
// cl.print();
|
||||
// cout << int_x << " " << int_y << endl;
|
||||
// cout <<"**************"<< endl;
|
||||
// if (etax!=0 && etay!=0 && etax!=1 && etay!=1)
|
||||
interp->addToImage(int_x, int_y);
|
||||
if (int_x<0 || int_y<0 || int_x>400 || int_y>400) {
|
||||
cout <<"**************"<< endl;
|
||||
cout << cl.x << " " << cl.y << " " << sum << endl;
|
||||
cl.print();
|
||||
cout << int_x << " " << int_y << endl;
|
||||
cout <<"**************"<< endl;
|
||||
}
|
||||
#endif
|
||||
#ifdef FF
|
||||
// interp->addToFlatField(cl.get_cluster(), etax, etay);
|
||||
// #ifdef UCL
|
||||
// if (cl.x>50)
|
||||
// #endif
|
||||
// if (etax!=0 && etay!=0 && etax!=1 && etay!=1)
|
||||
interp->addToFlatField(etax, etay);
|
||||
// if (etax==0 || etay==0) cout << cl.x << " " << cl.y << endl;
|
||||
|
||||
#endif
|
||||
// #ifdef SOLEIL
|
||||
// }
|
||||
// #endif
|
||||
|
||||
if (nph%1000000==0) cout << nph << endl;
|
||||
if (nph%10000000==0) {
|
||||
#ifndef FF
|
||||
interp->writeInterpolatedImage(outfname);
|
||||
#endif
|
||||
#ifdef FF
|
||||
interp->writeFlatField(outfname);
|
||||
#endif
|
||||
|
||||
}
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
|
||||
fclose(f);
|
||||
#ifdef FF
|
||||
interp->writeFlatField(outfname);
|
||||
#endif
|
||||
|
||||
#ifndef FF
|
||||
interp->writeInterpolatedImage(outfname);
|
||||
|
||||
img=interp->getInterpolatedImage();
|
||||
for (ix=0; ix<NC; ix++) {
|
||||
for (iy=0; iy<NR; iy++) {
|
||||
for (isx=0; isx<nsubpix; isx++) {
|
||||
for (isy=0; isy<nsubpix; isy++) {
|
||||
totimg[ix*nsubpix+isx+(iy*nsubpix+isy)*(NC*nsubpix)]+=img[ix*nsubpix+isx+(iy*nsubpix+isy)*(NC*nsubpix)];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
cout << "Read " << nframes << " frames (first frame: " << f0 << " last frame: " << lastframe << " delta:" << lastframe-f0 << ") nph="<< nph <<endl;
|
||||
interp->clearInterpolatedImage();
|
||||
#endif
|
||||
|
||||
} else
|
||||
cout << "could not open file " << infname << endl;
|
||||
}
|
||||
#ifndef FF
|
||||
sprintf(outfname,argv[3],11111);
|
||||
WriteToTiff(totimg, outfname,NC*nsubpix,NR*nsubpix);
|
||||
#endif
|
||||
|
||||
#ifdef FF
|
||||
interp->writeFlatField(outfname);
|
||||
#endif
|
||||
|
||||
cout << "Filled " << nph << " (/"<< totph <<") " << endl;
|
||||
return 0;
|
||||
}
|
||||
|
||||
@ -0,0 +1,453 @@
|
||||
//#include "sls/ansi.h"
|
||||
#include <iostream>
|
||||
#define CORR
|
||||
|
||||
#define C_GHOST 0.0004
|
||||
|
||||
#define CM_ROWS 50
|
||||
|
||||
//#define VERSION_V1
|
||||
|
||||
//#include "moench03T1ZmqData.h"
|
||||
#ifdef NEWRECEIVER
|
||||
#ifndef RECT
|
||||
#include "moench03T1ReceiverDataNew.h"
|
||||
#endif
|
||||
|
||||
#ifdef RECT
|
||||
#include "moench03T1ReceiverDataNewRect.h"
|
||||
#endif
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
#ifdef CSAXS_FP
|
||||
#include "moench03T1ReceiverData.h"
|
||||
#endif
|
||||
#ifdef OLDDATA
|
||||
#include "moench03Ctb10GbT1Data.h"
|
||||
#endif
|
||||
|
||||
// #include "interpolatingDetector.h"
|
||||
//#include "etaInterpolationPosXY.h"
|
||||
// #include "linearInterpolation.h"
|
||||
// #include "noInterpolation.h"
|
||||
#include "multiThreadedCountingDetector.h"
|
||||
//#include "multiThreadedAnalogDetector.h"
|
||||
#include "singlePhotonDetector.h"
|
||||
#include "moench03GhostSummation.h"
|
||||
#include "moench03CommonMode.h"
|
||||
//#include "interpolatingDetector.h"
|
||||
|
||||
#include <stdio.h>
|
||||
#include <map>
|
||||
#include <fstream>
|
||||
#include <sys/stat.h>
|
||||
|
||||
#include <ctime>
|
||||
using namespace std;
|
||||
|
||||
|
||||
int main(int argc, char *argv[]) {
|
||||
|
||||
|
||||
if (argc<4) {
|
||||
cout << "Usage is " << argv[0] << "indir outdir fname [runmin] [runmax] [pedfile] [threshold] [nframes] [xmin xmax ymin ymax] [gainmap]" << endl;
|
||||
cout << "threshold <0 means analog; threshold=0 means cluster finder; threshold>0 means photon counting" << endl;
|
||||
cout << "nframes <0 means sum everything; nframes=0 means one file per run; nframes>0 means one file every nframes" << endl;
|
||||
return 1;
|
||||
}
|
||||
|
||||
int p=10000;
|
||||
int fifosize=1000;
|
||||
int nthreads=10;
|
||||
int nsubpix=25;
|
||||
int etabins=nsubpix*10;
|
||||
double etamin=-1, etamax=2;
|
||||
int csize=3;
|
||||
int save=1;
|
||||
int nsigma=5;
|
||||
int nped=10000;
|
||||
int ndark=100;
|
||||
int ok;
|
||||
int iprog=0;
|
||||
|
||||
int cf=0;
|
||||
|
||||
#ifdef NEWRECEIVER
|
||||
#ifdef RECT
|
||||
cout << "Should be rectangular!" <<endl;
|
||||
#endif
|
||||
moench03T1ReceiverDataNew *decoder=new moench03T1ReceiverDataNew();
|
||||
cout << "RECEIVER DATA WITH ONE HEADER!"<<endl;
|
||||
#endif
|
||||
|
||||
#ifdef CSAXS_FP
|
||||
moench03T1ReceiverData *decoder=new moench03T1ReceiverData();
|
||||
cout << "RECEIVER DATA WITH ALL HEADERS!"<<endl;
|
||||
#endif
|
||||
|
||||
#ifdef OLDDATA
|
||||
moench03Ctb10GbT1Data *decoder=new moench03Ctb10GbT1Data();
|
||||
cout << "OLD RECEIVER DATA!"<<endl;
|
||||
#endif
|
||||
|
||||
int nx=400, ny=400;
|
||||
|
||||
decoder->getDetectorSize(nx,ny);
|
||||
|
||||
int ncol_cm=CM_ROWS;
|
||||
double xt_ghost=C_GHOST;
|
||||
moench03CommonMode *cm=NULL;
|
||||
moench03GhostSummation *gs;
|
||||
double *gainmap=NULL;
|
||||
float *gm;
|
||||
|
||||
|
||||
|
||||
int size = 327680;////atoi(argv[3]);
|
||||
|
||||
int* image;
|
||||
//int* image =new int[327680/sizeof(int)];
|
||||
|
||||
int ff, np;
|
||||
//cout << " data size is " << dsize;
|
||||
|
||||
|
||||
|
||||
ifstream filebin;
|
||||
char *indir=argv[1];
|
||||
char *outdir=argv[2];
|
||||
char *fformat=argv[3];
|
||||
int runmin=0;
|
||||
|
||||
// cout << "argc is " << argc << endl;
|
||||
if (argc>=5) {
|
||||
runmin=atoi(argv[4]);
|
||||
}
|
||||
|
||||
int runmax=runmin;
|
||||
|
||||
if (argc>=6) {
|
||||
runmax=atoi(argv[5]);
|
||||
}
|
||||
|
||||
char *pedfile=NULL;
|
||||
if (argc>=7) {
|
||||
pedfile=argv[6];
|
||||
}
|
||||
double thr=0;
|
||||
double thr1=1;
|
||||
|
||||
if (argc>=8) {
|
||||
thr=atof(argv[7]);
|
||||
}
|
||||
|
||||
|
||||
int nframes=0;
|
||||
|
||||
if (argc>=9) {
|
||||
nframes=atoi(argv[8]);
|
||||
}
|
||||
|
||||
int xmin=0, xmax=nx, ymin=0, ymax=ny;
|
||||
if (argc>=13) {
|
||||
xmin=atoi(argv[9]);
|
||||
xmax=atoi(argv[10]);
|
||||
ymin=atoi(argv[11]);
|
||||
ymax=atoi(argv[12]);
|
||||
}
|
||||
|
||||
|
||||
char *gainfname=NULL;
|
||||
if (argc>13) {
|
||||
gainfname=argv[13];
|
||||
cout << "Gain map file name is: " << gainfname << endl;
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
char ffname[10000];
|
||||
char fname[10000];
|
||||
char imgfname[10000];
|
||||
char cfname[10000];
|
||||
char fn[10000];
|
||||
|
||||
std::time_t end_time;
|
||||
|
||||
FILE *of=NULL;
|
||||
cout << "input directory is " << indir << endl;
|
||||
cout << "output directory is " << outdir << endl;
|
||||
cout << "input file is " << fformat << endl;
|
||||
cout << "runmin is " << runmin << endl;
|
||||
cout << "runmax is " << runmax << endl;
|
||||
if (pedfile)
|
||||
cout << "pedestal file is " << pedfile << endl;
|
||||
if (thr>0)
|
||||
cout << "threshold is " << thr << endl;
|
||||
cout << "Nframes is " << nframes << endl;
|
||||
|
||||
uint32 nnx, nny;
|
||||
double *gmap;
|
||||
|
||||
// if (gainfname) {
|
||||
// gm=ReadFromTiff(gainfname, nny, nnx);
|
||||
// if (gm && nnx==nx && nny==ny) {
|
||||
// gmap=new double[nx*ny];
|
||||
// for (int i=0; i<nx*ny; i++) {
|
||||
// gmap[i]=gm[i];
|
||||
// }
|
||||
// delete gm;
|
||||
// } else
|
||||
// cout << "Could not open gain map " << gainfname << endl;
|
||||
// }
|
||||
|
||||
#ifdef CORR
|
||||
cout << "Applying common mode " << ncol_cm << endl;
|
||||
cm=new moench03CommonMode(ncol_cm);
|
||||
|
||||
|
||||
cout << "Applying ghost corrections " << xt_ghost << endl;
|
||||
gs=new moench03GhostSummation(decoder, xt_ghost);
|
||||
#endif
|
||||
|
||||
singlePhotonDetector *filter=new singlePhotonDetector(decoder,csize, nsigma, 1, cm, nped, 200, -1, -1, gainmap, gs);
|
||||
|
||||
if (gainfname) {
|
||||
|
||||
if (filter->readGainMap(gainfname))
|
||||
cout << "using gain map " << gainfname << endl;
|
||||
else
|
||||
cout << "Could not open gain map " << gainfname << endl;
|
||||
} else
|
||||
thr=0.15*thr;
|
||||
filter->newDataSet();
|
||||
int dsize=decoder->getDataSize();
|
||||
|
||||
|
||||
char data[dsize];
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
//#ifndef ANALOG
|
||||
if (thr>0) {
|
||||
cout << "threshold is " << thr << endl;
|
||||
//#ifndef ANALOG
|
||||
filter->setThreshold(thr);
|
||||
//#endif
|
||||
cf=0;
|
||||
|
||||
} else
|
||||
cf=1;
|
||||
//#endif
|
||||
|
||||
|
||||
filter->setROI(xmin,xmax,ymin,ymax);
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
|
||||
char* buff;
|
||||
|
||||
// multiThreadedAnalogDetector *mt=new multiThreadedAnalogDetector(filter,nthreads,fifosize);
|
||||
multiThreadedCountingDetector *mt=new multiThreadedCountingDetector(filter,nthreads,fifosize);
|
||||
#ifndef ANALOG
|
||||
mt->setDetectorMode(ePhotonCounting);
|
||||
cout << "Counting!" << endl;
|
||||
if (thr>0) {
|
||||
cf=0;
|
||||
}
|
||||
#endif
|
||||
//{
|
||||
#ifdef ANALOG
|
||||
mt->setDetectorMode(eAnalog);
|
||||
cout << "Analog!" << endl;
|
||||
cf=0;
|
||||
//thr1=thr;
|
||||
#endif
|
||||
// }
|
||||
|
||||
mt->StartThreads();
|
||||
mt->popFree(buff);
|
||||
|
||||
|
||||
// cout << "mt " << endl;
|
||||
|
||||
int ifr=0;
|
||||
|
||||
double ped[nx*ny], *ped1;
|
||||
|
||||
|
||||
if (pedfile) {
|
||||
|
||||
cout << "PEDESTAL " << endl;
|
||||
sprintf(imgfname,"%s/pedestals.tiff",outdir);
|
||||
|
||||
if (string(pedfile).find(".tif")==std::string::npos){
|
||||
sprintf(fname,"%s.raw",pedfile);
|
||||
cout << fname << endl ;
|
||||
std::time(&end_time);
|
||||
cout << "aaa" << std::ctime(&end_time) << endl;
|
||||
|
||||
|
||||
mt->setFrameMode(ePedestal);
|
||||
// sprintf(fn,fformat,irun);
|
||||
filebin.open((const char *)(fname), ios::in | ios::binary);
|
||||
// //open file
|
||||
if (filebin.is_open()){
|
||||
ff=-1;
|
||||
while (decoder->readNextFrame(filebin, ff, np,buff)) {
|
||||
if (np==40) {
|
||||
mt->pushData(buff);
|
||||
mt->nextThread();
|
||||
mt->popFree(buff);
|
||||
ifr++;
|
||||
if (ifr%100==0)
|
||||
cout << ifr << " " << ff << " " << np << endl;
|
||||
} else
|
||||
cout << ifr << " " << ff << " " << np << endl;
|
||||
ff=-1;
|
||||
}
|
||||
filebin.close();
|
||||
while (mt->isBusy()) {;}
|
||||
|
||||
} else
|
||||
cout << "Could not open pedestal file "<< fname << " for reading " << endl;
|
||||
} else {
|
||||
float *pp=ReadFromTiff(pedfile, nny, nnx);
|
||||
if (pp && nnx==nx && nny==ny) {
|
||||
for (int i=0; i<nx*ny; i++) {
|
||||
ped[i]=pp[i];
|
||||
}
|
||||
delete [] pp;
|
||||
mt->setPedestal(ped);
|
||||
// ped1=mt->getPedestal();
|
||||
|
||||
// for (int i=0; i<nx*ny; i++) {
|
||||
|
||||
// cout << ped[i]<<"/"<<ped1[i] << " " ;
|
||||
// }
|
||||
cout << "Pedestal set from tiff file " << pedfile << endl;
|
||||
} else {
|
||||
cout << "Could not open pedestal tiff file "<< pedfile << " for reading " << endl;
|
||||
}
|
||||
}
|
||||
mt->writePedestal(imgfname);
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
}
|
||||
|
||||
|
||||
|
||||
ifr=0;
|
||||
int ifile=0;
|
||||
|
||||
mt->setFrameMode(eFrame);
|
||||
|
||||
for (int irun=runmin; irun<=runmax; irun++) {
|
||||
cout << "DATA " ;
|
||||
// sprintf(fn,fformat,irun);
|
||||
sprintf(ffname,"%s/%s.raw",indir,fformat);
|
||||
sprintf(fname,ffname,irun);
|
||||
sprintf(ffname,"%s/%s.tiff",outdir,fformat);
|
||||
sprintf(imgfname,ffname,irun);
|
||||
sprintf(ffname,"%s/%s.clust",outdir,fformat);
|
||||
sprintf(cfname,ffname,irun);
|
||||
cout << fname << " " ;
|
||||
cout << imgfname << endl;
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
// cout << fname << " " << outfname << " " << imgfname << endl;
|
||||
filebin.open((const char *)(fname), ios::in | ios::binary);
|
||||
// //open file
|
||||
ifile=0;
|
||||
if (filebin.is_open()){
|
||||
if (thr<=0 && cf!=0) { //cluster finder
|
||||
if (of==NULL) {
|
||||
of=fopen(cfname,"w");
|
||||
if (of) {
|
||||
mt->setFilePointer(of);
|
||||
cout << "file pointer set " << endl;
|
||||
} else {
|
||||
cout << "Could not open "<< cfname << " for writing " << endl;
|
||||
mt->setFilePointer(NULL);
|
||||
return 1;
|
||||
}
|
||||
}
|
||||
}
|
||||
// //while read frame
|
||||
ff=-1;
|
||||
ifr=0;
|
||||
while (decoder->readNextFrame(filebin, ff, np,buff)) {
|
||||
if (np==40) {
|
||||
// cout << "*"<<ifr++<<"*"<<ff<< endl;
|
||||
// cout << ff << " " << np << endl;
|
||||
// //push
|
||||
mt->pushData(buff);
|
||||
// // //pop
|
||||
mt->nextThread();
|
||||
// // // cout << " " << (void*)buff;
|
||||
mt->popFree(buff);
|
||||
|
||||
|
||||
|
||||
|
||||
ifr++;
|
||||
if (ifr%100==0) cout << ifr << " " << ff << endl;
|
||||
if (nframes>0) {
|
||||
if (ifr%nframes==0) {
|
||||
//The name has an additional "_fXXXXX" at the end, where "XXXXX" is the initial frame number of the image (0,1000,2000...)
|
||||
|
||||
sprintf(ffname,"%s/%s_f%05d.tiff",outdir,fformat,ifile);
|
||||
sprintf(imgfname,ffname,irun);
|
||||
//cout << "Writing tiff to " << imgfname << " " << thr1 << endl;
|
||||
mt->writeImage(imgfname, thr1);
|
||||
mt->clearImage();
|
||||
ifile++;
|
||||
}
|
||||
}
|
||||
} else
|
||||
cout << ifr << " " << ff << " " << np << endl;
|
||||
ff=-1;
|
||||
}
|
||||
cout << "--" << endl;
|
||||
filebin.close();
|
||||
// //close file
|
||||
// //join threads
|
||||
while (mt->isBusy()) {;}
|
||||
if (nframes>=0) {
|
||||
if (nframes>0) {
|
||||
sprintf(ffname,"%s/%s_f%05d.tiff",outdir,fformat,ifile);
|
||||
sprintf(imgfname,ffname,irun);
|
||||
} else {
|
||||
sprintf(ffname,"%s/%s.tiff",outdir,fformat);
|
||||
sprintf(imgfname,ffname,irun);
|
||||
}
|
||||
cout << "Writing tiff to " << imgfname << " " << thr1 <<endl;
|
||||
mt->writeImage(imgfname, thr1);
|
||||
mt->clearImage();
|
||||
if (of) {
|
||||
fclose(of);
|
||||
of=NULL;
|
||||
mt->setFilePointer(NULL);
|
||||
}
|
||||
}
|
||||
std::time(&end_time);
|
||||
cout << std::ctime(&end_time) << endl;
|
||||
} else
|
||||
cout << "Could not open "<< fname << " for reading " << endl;
|
||||
}
|
||||
if (nframes<0){
|
||||
sprintf(ffname,"%s/%s.tiff",outdir,fformat);
|
||||
strcpy(imgfname,ffname);
|
||||
cout << "Writing tiff to " << imgfname << " " << thr1 <<endl;
|
||||
mt->writeImage(imgfname, thr1);
|
||||
}
|
||||
|
||||
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
1026
slsDetectorCalibration/jungfrauExecutables/jungfrauZmqProcess.cpp
Normal file
1026
slsDetectorCalibration/jungfrauExecutables/jungfrauZmqProcess.cpp
Normal file
File diff suppressed because it is too large
Load Diff
Reference in New Issue
Block a user