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removed manual client and gui
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||||
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|
||||
1Fs+14>rrE,JJcF@%!Bc[Ts8N)rs8N)us8N)os8N)ss8N)us8E#us8N)trr<&rrr<&ts8N(Ms7l
|
||||
VFs7$$h!7HGufDbk6QFHni!<)rq!;6Bh!<)rt!!*&u!<)rt!;c`o!.k1Ds+14>rrE,JJcF@%!Bc
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||||
[&rr<%Ms6BW8s7$$h!7HGufDbk6QA>M?!.k18s+14>rrEX]J\0RH!jifCL]@ASJcG$8JcG6>!N@
|
||||
;p&_IZs'jpfgs+14<s+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+13$s0)HRs+13$s+13Rs+13$s+1
|
||||
3$s0)HQ~>
|
||||
%%EndData
|
||||
showpage
|
||||
%%Trailer
|
||||
end
|
||||
%%EOF
|
||||
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|
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|
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|
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|
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|
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@ -1,78 +0,0 @@
|
||||
DESTDIR?=../docs
|
||||
|
||||
#manual-api manual-calwiz manual-client manual-gui manual-main
|
||||
|
||||
|
||||
TEX=latex
|
||||
|
||||
MAINTEXS= slsDetectorClientHowTo.tex
|
||||
|
||||
DVIS = $(MAINTEXS:.tex=.dvi)
|
||||
PSS = $(MAINTEXS:.tex=.ps)
|
||||
PDFS = $(MAINTEXS:.tex=.pdf)
|
||||
HTMLS = $(MAINTEXS:%.tex=%)
|
||||
|
||||
|
||||
all: docs pdf html
|
||||
echo $(PWD)
|
||||
echo $(PDFS)
|
||||
echo $(HTMLS)
|
||||
|
||||
docs: createdocs docspdf docshtml removedocs
|
||||
|
||||
createdocs: slsDetectorClient.doxy slsDetectorCommand.cpp
|
||||
doxygen slsDetectorClient.doxy
|
||||
|
||||
docspdf:
|
||||
cd slsDetectorClientDocs/latex && make
|
||||
$(shell test -d $(DESTDIR) || mkdir -p $(DESTDIR))
|
||||
$(shell test -d $(DESTDIR)/pdf || mkdir -p $(DESTDIR)/pdf)
|
||||
mv slsDetectorClientDocs/latex/refman.pdf $(DESTDIR)/pdf/slsDetectorClientDocs.pdf
|
||||
|
||||
docshtml:
|
||||
$(shell test -d $(DESTDIR) || mkdir -p $(DESTDIR))
|
||||
$(shell test -d $(DESTDIR)/html || mkdir -p $(DESTDIR)/html)
|
||||
$(shell test -d $(DESTDIR)/html/slsDetectorClientDocs && rm -r $(DESTDIR)/html/slsDetectorClientDocs)
|
||||
mv slsDetectorClientDocs/html $(DESTDIR)/html/slsDetectorClientDocs
|
||||
|
||||
removedocs:
|
||||
rm -rf slsDetectorClientDocs;
|
||||
|
||||
pdf: $(PDFS)
|
||||
$(shell test -d $(DESTDIR) || mkdir -p $(DESTDIR))
|
||||
$(shell test -d $(DESTDIR)/pdf || mkdir -p $(DESTDIR)/pdf)
|
||||
mv $(PDFS) $(DESTDIR)/pdf
|
||||
|
||||
|
||||
html: $(HTMLS)
|
||||
|
||||
$(HTMLS): $(MAINTEXS)
|
||||
$(shell test -d $(DESTDIR) || mkdir -p $(DESTDIR))
|
||||
$(shell test -d $(DESTDIR)/html || mkdir -p $(DESTDIR)/html)
|
||||
$(shell test -d $(DESTDIR)/html/$@ && rm -r $(DESTDIR)/html/$@)
|
||||
latex $@.tex
|
||||
latex2html -split 4 $@.tex
|
||||
mv $@ $(DESTDIR)/html
|
||||
|
||||
|
||||
|
||||
%.dvi : %.tex
|
||||
latex $<
|
||||
latex $<
|
||||
|
||||
%.ps : %.dvi
|
||||
dvips -o $@ $<
|
||||
|
||||
|
||||
%.pdf : %.ps
|
||||
ps2pdf $< $@
|
||||
|
||||
|
||||
clean:
|
||||
echo "cleaning for manual-client"
|
||||
rm -rf *.aux *.log *.toc *.out $(DVIS) $(PSS) $(PDFS) $(HTMLS)
|
||||
rm -rf slsDetectorClientDocs
|
||||
rm -rf $(DESTDIR)/html/slsDetectorClientDocs
|
||||
rm -rf $(DESTDIR)/html/slsDetectorClientHowTo
|
||||
rm -rf $(DESTDIR)/pdf/slsDetectorClientDocs.pdf
|
||||
rm -rf $(DESTDIR)/pdf/slsDetectorClientHowTo.pdf
|
||||
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|
Before Width: | Height: | Size: 16 KiB |
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|
Before Width: | Height: | Size: 28 KiB |
@ -1,180 +0,0 @@
|
||||
/*acquisition commands */
|
||||
"acquire"; // starts the detector, acquires, saves, postprocesses the data
|
||||
"data"; // get all the data (detector should already be started)
|
||||
"frame"; // get one frame (detector should already be started)
|
||||
"status"; // can put start or stop, returns idel, error, running, data...
|
||||
/*configuration commands */
|
||||
"free";// frees shared memory
|
||||
"add";// adds ne detector to multydetector structure
|
||||
"remove";// removes detector from multidetector structure
|
||||
"type"; // adds ne detector of type to multidetector structure - type can be Mythen , Gotthard...
|
||||
"hostname"; // for slsDetector sets the hostname, for multislsdetector adds new detector with hostname
|
||||
"id"; // returns the id of a detector
|
||||
"master"; // sets/gets the master for synchronization of multidetector
|
||||
"sync"; // sets/gets synchronization mode of a multidetector (none, trigger, gating, compementary)
|
||||
"help";// help for a command
|
||||
"exitserver";// shuts down detector server - do not use!
|
||||
/* data processing commands */
|
||||
"flatfield"; // sets/gets flatfield file
|
||||
"ffdir"; // sets gets/ flatfield directory
|
||||
"ratecorr"; // sets/gets rate correction tau in ns
|
||||
"badchannels"; // sets/gets badchannel file
|
||||
"angconv"; // sets/gets angularconversion file
|
||||
"globaloff"; // sets/gets beamline globaloffset
|
||||
"fineoff"; // sets/gets experiment fine offset
|
||||
"binsize" ;// sets/gets angular binsize for angular conversion
|
||||
"angdir" ;// sets/ get angular direction (1,-1)
|
||||
"moveflag" ;// sets/gets moveflag for the detector (default is 1)
|
||||
"threaded"; // sets/gets threaded mode (do not use!)
|
||||
"darkimage"; // sets/gets the darkimage for the Gotthard detector
|
||||
"gainimage"; // sets/gets the gainimage for the Gotthard detector
|
||||
"readctr"; // read counters for the Gotthard detector
|
||||
"resetctr"; //resets counters for the Gotthard detector
|
||||
"resmat"; //reset or not the counter before the following acquisition (at the end of the acquisoition the counter is always reset) (very advanced! EIGER only)
|
||||
/* trim/cal directories */
|
||||
"settingsdir"; //sets/gets the directory where the settings files are
|
||||
"trimdir"; // as settingsdir
|
||||
"caldir"; //sets/gets the directory where the calibration files are
|
||||
"trimen"; // sets/gets the energies at which the detector is trimmed (no implemented)
|
||||
/* file name */
|
||||
"outdir"; // sets/gets the output directory
|
||||
"fname"; // sets/gets the file name
|
||||
"index"; // sets/gets the start file index (Automatically incremented during the acquisition)
|
||||
"online"; // checks if the detector is online
|
||||
"checkonline"; // checks if the detector is online by testing the connection
|
||||
"enablefwrite"; // enable/disable file writing
|
||||
/* Acquisition actions */
|
||||
"positions"; // sets/gets number of positions and their values
|
||||
"startscript"; // sets/gets start script
|
||||
"startscriptpar"; // sets/gets start script parameter
|
||||
"stopscript"; // sets/gets stop script
|
||||
"stopscriptpar"; // sets/gets stop script parameter
|
||||
"scriptbefore"; // sets/gets scrip before
|
||||
"scriptbeforepar"; //sets/gets scrip before parameter
|
||||
"scriptafter"; // sets/gets script after
|
||||
"scriptafterpar"; //sets/gets script after parameter
|
||||
"headerafter"; // sets/gets header after script
|
||||
"headerafterpar"; // sets/gets header after parameter
|
||||
"headerbefore"; // sets/gets header before script
|
||||
"headerbeforepar"; // sets/gets header before parameter
|
||||
"scan0script"; // sets/gets scan0 script (or none,threshold, energy,position)
|
||||
"scan0par"; // sets/gets scan0 parameter
|
||||
"scan0prec"; // sets/gets scan0 precision (in file name)
|
||||
"scan0steps"; // sets/gets scan0 number of steps and their values
|
||||
"scan0range"; // sets/gets scan0 range (min, max, step)
|
||||
"scan1script"; // sets/gets scan1 script (or none,threshold, energy,position)
|
||||
"scan1par"; // sets/gets scan1 parameter
|
||||
"scan1prec"; // sets/gets scan1 precision (in file name)
|
||||
"scan1steps"; // sets/gets scan1 number of steps and their values
|
||||
"scan1range"; // sets/gets scan1 range (min, max, step)
|
||||
"encallog"; // sets/gets encallog mode (0,1) for energy calibration
|
||||
"angcallog"; // sets/gets angcallog mode (0,1) for energy calibration
|
||||
/* communication configuration */
|
||||
"clientip"; // sets/gest client ip for Gotthard
|
||||
"clientmac"; // sets/gest client mac for Gotthard
|
||||
"servermac"; // sets/gest server mac for Gotthard
|
||||
"configuremac"; // configure the detector mac for Gotthard
|
||||
"port"; // sets control communication port
|
||||
"stopport"; // sets status communication port
|
||||
"dataport"; // sets data port
|
||||
"lock"; // lock detector (no other PC can connect)
|
||||
"lastclient"; // gest last conencted client
|
||||
/* detector and data size */
|
||||
"nmod"; // sets/gets number of modules
|
||||
"maxmod"; // sets/gets maximum number of modules
|
||||
"dr"; // sets/gets dynamic range
|
||||
/* flags */
|
||||
"flags"; // sets/gets readout flags (none, storeinram, tot)
|
||||
"extsig"; // sets/gets configuration of the lemo conenctors
|
||||
"timing"; // sets/gets detector timing mode (auto, gating, trigger)
|
||||
/* versions/ serial numbers getId */
|
||||
"moduleversion"; // gets module version
|
||||
"detectornumber"; // gets detector mac address
|
||||
"modulenumber"; // gets module serial number
|
||||
"detectorversion"; // gets detector firmware version
|
||||
"softwareversion"; // gets detector software version
|
||||
"thisversion"; // get client software version
|
||||
/* digital test and debugging */
|
||||
"digitest"; // digital test of a module
|
||||
"bustest"; // test of CPU-FPGA communication
|
||||
"digibittest"; // for Gotthard
|
||||
"acqtest"; // for Gotthard
|
||||
"reg"; // read/write register - do not use!
|
||||
/* settings, threshold */
|
||||
"settings"; // set/gets settings (standard, fast, highgain)
|
||||
"threshold"; // set threshold in eV
|
||||
"trimbits"; // set/get trimbit value (for all channels!)
|
||||
"trim"; // trim detector (noise, improve etc.)
|
||||
/* r/w timers */
|
||||
"exptime"; // sets/gets exposure time in s
|
||||
"period"; // sets/gets frame period in s
|
||||
"delay"; // sets/gets delay after trigger in s
|
||||
"gates"; // sets/gets number of gates per frame in gated mode
|
||||
"frames"; // sets/gets number of frames
|
||||
"triggers"; // sets/gets number of triggers (use in trigger mode)
|
||||
"probes"; // sets/gets number of probes (advanced!)
|
||||
"measurements"; // sets/gets number of non-real time measurements
|
||||
/* read only timers */
|
||||
"exptimel"; // gets exposure time left
|
||||
"periodl"; // gets period left
|
||||
"delayl"; // gets delay left
|
||||
"gatesl"; // gets number of gates left
|
||||
"framesl"; // gets number of frames left
|
||||
"triggersl"; // gets number of triggers left
|
||||
"now"; // gets time stamp from the dteector
|
||||
"timestamp"; // gets time stamp for the frames (fifo-style)
|
||||
"framescaught";// gets the entire frames caught by receiver
|
||||
"resetframescaught x"; resets the value of framescaught to x
|
||||
/* speed */
|
||||
"clkdivider"; // sets/gets readout clock divider (advanced!)
|
||||
"setlength";// sets/gets readout set/clear length (advanced!)
|
||||
"waitstates"; // sets/gets CPU waitstates (advanced!)
|
||||
"totdivider"; // sets/gets tot ckdivider (advanced!)
|
||||
"totdutycycle"; // sets/gets tot duty cycle (advanced!)
|
||||
/* settings dump/retrieve */
|
||||
"config"; // loads/save configuration file
|
||||
"parameters"; // loads/save parameters file
|
||||
"setup"; // loads/save complete detector setup
|
||||
/* pots */
|
||||
"vthreshold"; // sets/get vthreshold value (advanced! Mythen and Eiger)
|
||||
"vcalibration"; // sets/get vcalibration value (advanced! Mythen)
|
||||
"vtrimbit"; // sets/get vtrimbit value (advanced! Mythen)
|
||||
"vpreamp"; // sets/get vpreamp value (advanced! Mythen)
|
||||
"vshaper1"; // sets/get vshaper1 value (advanced! Mythen)
|
||||
"vshaper2"; // sets/get vshaper2 value (advanced! Mythen)
|
||||
"highvoltage"; // sets/get highvoltage value (advanced! Chiptest board and Eiger)
|
||||
"vapower"; // sets/get vapower value (advanced! Chiptest board)
|
||||
"vddpower"; // sets/get vddpower value (advanced! Chiptest board)
|
||||
"vshpower"; // sets/get vshpower value (advanced! Chiptest board)
|
||||
"viopower"; // sets/get viopower value (advanced! Chiptest board)
|
||||
"vref_ds"; // sets/get vref_ds value (advanced! Gotthard)
|
||||
"vcascn_pb"; // sets/get vcascn_pb value (advanced! Gotthard)
|
||||
"vcascp_pb"; // sets/get vcascp_pb value (advanced! Gotthard)
|
||||
"vout_cm"; // sets/get vout_cm value (advanced! Gotthard)
|
||||
"vcasc_out"; // sets/get vcasc_out value (advanced! Gotthard)
|
||||
"vin_cm"; // sets/get vin_cm value (advanced! Gotthard)
|
||||
"vsvp"; // sets/get vsvp value (advanced! Eiger)
|
||||
"vsvn"; // sets/get vsvn value (advanced! Eiger)
|
||||
"vtr"; // sets/get vtr value (advanced! Eiger)
|
||||
"vrf"; // sets/get vrf value (advanced! Eiger)
|
||||
"vrs"; // sets/get vrs value (advanced! Eiger)
|
||||
"vtgstv"; // sets/get vtgstv value (advanced! Eiger)
|
||||
"vcmp_ll"; // sets/get vcmp_ll value (advanced! Eiger)
|
||||
"vcmp_lr"; // sets/get vcmp_lr value (advanced! Eiger)
|
||||
"vcall"; // sets/get vcall value (advanced! Eiger)
|
||||
"vcmp_rl"; // sets/get vcmp_rl value (advanced! Eiger)
|
||||
"vcmp_rr"; // sets/get vcmp_rr value (advanced! Eiger)
|
||||
"rxb_rb"; // sets/get rxb_rb value (advanced! Eiger)
|
||||
"rxb_lb"; // sets/get rxb_rb value (advanced! Eiger)
|
||||
"vcp"; // sets/get vcp value (advanced! Eiger)
|
||||
"vcn"; // sets/get vcn value (advanced! Eiger)
|
||||
"vis"; // sets/get vis value (advanced! Eiger)
|
||||
"iodelay"; // sets/get iodelay value (advanced! Eiger)
|
||||
|
||||
"vref_comp"; // sets/get vref_comp value (advanced! Gotthard)
|
||||
"ib_test_c"; // sets/get ib_test_c value (advanced! Gotthard)
|
||||
"temp_adc"; // get adc temperature (advanced! Gotthard)
|
||||
"temp_fpga"; //get fpga temperature (advanced! Gotthard)
|
||||
"pulsechip n"; //advanc ed! EIGER: pulses the chip $n$ times with the enable. If n$=-1$, the chip will be set into normal mode.
|
||||
"pulse n x y"; // Pulses pixel at coordinates (x,y) $n$-times.
|
||||
"pulsenmove n x y"; //Pulses pixel $n$-times and moves relatively by x value (x axis) and y value (y axis)
|
||||
@ -1,59 +0,0 @@
|
||||
The slsDetectorGUI is based on Qt4 with Qwt libraries.
|
||||
|
||||
-Qt4.6 installation:
|
||||
|
||||
Download the opend source version:
|
||||
ftp://ftp.qt.nokia.com/qt/source/qt-everywhere-opensource-src-4.6.2.tar.gz
|
||||
|
||||
To install:
|
||||
gunzip qt-everywhere-opensource-src-4.6.2.tar.gz
|
||||
tar xvf qt-everywhere-opensource-src-4.6.2.tar
|
||||
./configure
|
||||
make
|
||||
make install
|
||||
|
||||
By default Qt4 will be installed int /usr/local/Trolltech/Qt-4.6.2/
|
||||
Edit your .bashrc:
|
||||
export QTDIR=/usr/local/Trolltech/Qt-4.6.2
|
||||
export PATH=$QTDIR/bin:$PATH
|
||||
export LD_LIBRARY_PATH=$QTDIR/lib:$LD_LIBRARY_PATH
|
||||
|
||||
If your system also have Qt3 installed, make sure that QTDIR, PATH and LD_LIBRARY_PATH point to Qt4 before installing Qwt (and of course compiling and running the GUI).
|
||||
|
||||
|
||||
|
||||
- Qwt5.2 installation
|
||||
|
||||
Download the sources:
|
||||
svn co https://qwt.svn.sourceforge.net/svnroot/qwt/branches/qwt-5.2
|
||||
|
||||
To install:
|
||||
cd qwt-5.2
|
||||
qmake
|
||||
make
|
||||
make install
|
||||
|
||||
By default Qwt will be installed in /usr/local/qwt-5.2.3-svn/
|
||||
Edit your .bashrc:
|
||||
export QWTDIR=/usr/local/qwt-5.2.3-svn/
|
||||
export LD_LIBRARY_PATH=$QWTDIR/lib:$LD_LIBRARY_PATH
|
||||
|
||||
|
||||
- The calibration wizards are based on the cern root software
|
||||
|
||||
Download the sources
|
||||
svn co https://root.cern.ch/svn/root/trunk root
|
||||
|
||||
To install:
|
||||
cd root
|
||||
./configure --enable-qt
|
||||
make
|
||||
make install
|
||||
|
||||
edit your .bashrc:
|
||||
export ROOTSYS=/usr/local/root
|
||||
export PATH=$ROOTSYS/bin:$PATH
|
||||
export LD_LIBRARY_PATH=$ROOTSYS/lib:$LD_LIBRARY_PATH
|
||||
|
||||
You can also download the binaries, assuming that your linuc and gcc versions match:
|
||||
http://root.cern.ch/drupal/content/production-version-534
|
||||
@ -1,86 +0,0 @@
|
||||
# If the EXTRACT_ALL tag is set to YES doxygen will assume all entities in
|
||||
# documentation are documented, even if no documentation was available.
|
||||
# Private class members and static file members will be hidden unless
|
||||
# the EXTRACT_PRIVATE and EXTRACT_STATIC tags are set to YES
|
||||
|
||||
EXTRACT_ALL = YES
|
||||
|
||||
# If the EXTRACT_PRIVATE tag is set to YES all private members of a class
|
||||
# will be included in the documentation.
|
||||
|
||||
EXTRACT_PRIVATE = NO
|
||||
|
||||
|
||||
|
||||
# If the EXTRACT_STATIC tag is set to YES all static members of a file
|
||||
# will be included in the documentation.
|
||||
|
||||
EXTRACT_STATIC = YES
|
||||
|
||||
# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs)
|
||||
# defined locally in source files will be included in the documentation.
|
||||
# If set to NO only classes defined in header files are included.
|
||||
|
||||
EXTRACT_LOCAL_CLASSES = YES
|
||||
|
||||
# This flag is only useful for Objective-C code. When set to YES local
|
||||
# methods, which are defined in the implementation section but not in
|
||||
# the interface are included in the documentation.
|
||||
# If set to NO (the default) only methods in the interface are included.
|
||||
|
||||
EXTRACT_LOCAL_METHODS = YES
|
||||
|
||||
# If this flag is set to YES, the members of anonymous namespaces will be
|
||||
# extracted and appear in the documentation as a namespace called
|
||||
# 'anonymous_namespace{file}', where file will be replaced with the base
|
||||
# name of the file that contains the anonymous namespace. By default
|
||||
# anonymous namespace are hidden.
|
||||
|
||||
EXTRACT_ANON_NSPACES = NO
|
||||
|
||||
# If the HIDE_UNDOC_MEMBERS tag is set to YES, Doxygen will hide all
|
||||
# undocumented members of documented classes, files or namespaces.
|
||||
# If set to NO (the default) these members will be included in the
|
||||
# various overviews, but no documentation section is generated.
|
||||
# This option has no effect if EXTRACT_ALL is enabled.
|
||||
|
||||
HIDE_UNDOC_MEMBERS = NO
|
||||
|
||||
# If the HIDE_UNDOC_CLASSES tag is set to YES, Doxygen will hide all
|
||||
# undocumented classes that are normally visible in the class hierarchy.
|
||||
# If set to NO (the default) these classes will be included in the various
|
||||
# overviews. This option has no effect if EXTRACT_ALL is enabled.
|
||||
|
||||
HIDE_UNDOC_CLASSES = NO
|
||||
|
||||
# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, Doxygen will hide all
|
||||
# friend (class|struct|union) declarations.
|
||||
# If set to NO (the default) these declarations will be included in the
|
||||
# documentation.
|
||||
|
||||
HIDE_FRIEND_COMPOUNDS = NO
|
||||
|
||||
INTERNAL_DOCS = NO
|
||||
|
||||
SHOW_INCLUDE_FILES = NO
|
||||
|
||||
SHOW_FILES = NO
|
||||
|
||||
SHOW_NAMESPACES = NO
|
||||
|
||||
COMPACT_LATEX = YES
|
||||
|
||||
PAPER_TYPE = a4
|
||||
|
||||
PDF_HYPERLINKS = YES
|
||||
|
||||
USE_PDFLATEX = YES
|
||||
|
||||
LATEX_HIDE_INDICES = YES
|
||||
|
||||
|
||||
PREDEFINED = __cplusplus
|
||||
|
||||
INPUT = slsDetectorCommand.cpp
|
||||
|
||||
OUTPUT_DIRECTORY = slsDetectorClientDocs
|
||||
@ -1,760 +0,0 @@
|
||||
\documentclass{article}
|
||||
\usepackage{amssymb}
|
||||
\usepackage[dvips]{graphicx}
|
||||
\usepackage{verbatim}
|
||||
\usepackage{xspace}
|
||||
\newcommand{\E}{EIGER\xspace}
|
||||
\begin{document}
|
||||
|
||||
\title{SLS Detector text clients manual}
|
||||
\date{\today}
|
||||
\maketitle
|
||||
|
||||
|
||||
|
||||
\section{Introduction}
|
||||
|
||||
This program is intended to control the SLS detectors via command line interface.\\
|
||||
This is the only way to access all possible functionality of the detectors, however it is often recommendable to avoid changing the most advanced settings, rather leaving the task to configuration files, as when using the GUI or the API provided.
|
||||
|
||||
The command line interface consists in four main functions:
|
||||
\begin{description}
|
||||
\item[sls\_detector\_acquire] to acquire data from the detector
|
||||
\item[sls\_detector\_put] to set detector parameters
|
||||
\item[sls\_detector\_get] to retrieve detector parameters
|
||||
\item[sls\_detector\_help] to get help concerning the text commands
|
||||
\end{description}
|
||||
Additionally the program \textbf{slsReceiver} should be started on the machine expected to receive the data from the detector.
|
||||
|
||||
|
||||
If you need control a single detector, the use of the command line interface does not need any additional arguments.
|
||||
|
||||
For commands addressing a single controller of your detector, the command \verb=cmd= should be called with the index \verb=i= of the controller:\\
|
||||
\verb=sls_detector_clnt i:cmd=\\
|
||||
where \verb=sls_detector_clnt= is the text client (put, get, acquire, help).
|
||||
|
||||
In case more than one detector is configured on the control PC, the command \verb=cmd= should be called with their respective index \verb=j=:
|
||||
\verb=sls_detector_clnt j-cmd=\\
|
||||
where \verb=sls_detector_clnt= is the text client (put, get, acquire, help).
|
||||
|
||||
To address a specific controller \verb=i= of detector \verb=j= use:\\
|
||||
\verb=sls_detector_clnt j-i:cmd=
|
||||
|
||||
For additional questions concerning the indexing of the detector, please refer to the \textit{SLS Detectors FAQ} documentation.
|
||||
|
||||
|
||||
\section{Acquisition}
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
By calling:\\
|
||||
\verb=sls\_detector\_acquire [j-]=\\
|
||||
the detector \verb=j= is started and the data are acquired, postprocessed and written to file according to the configuration and setup of the measurements.\\
|
||||
A progress index of the acquisition in percentage is shown on the command line.
|
||||
|
||||
For additional questions concerning the acquisition flow, please refer to the \textit{SLS Detectors FAQ} documentation.
|
||||
|
||||
\section{Detector setup}
|
||||
|
||||
\verb=sls\_detector\_put [j-][i:]var arg=\\
|
||||
|
||||
is used to configure the detector parameters \verb=var= with the value \verb=arg=.\\
|
||||
It returns the actual value of the variable, as when calling \verb=sls\_detector\_get= with the same command.
|
||||
|
||||
\subsection{Standard commands}
|
||||
|
||||
|
||||
\begin{description}
|
||||
\item[config fname]
|
||||
Load the configuration file fname. \\
|
||||
Examples of configuration files are available in the directory \verb=examples=. This should be done every time the configuration of the detectors(s) changes or the control PC is rebooted. Must be executed on all the control PCs, before executing other commands.
|
||||
\item[parameters fname]
|
||||
Load the parameter file fname. \\
|
||||
The syntax of the commands in the parameter file is exactly the same as for the command line interface. Can be used to load a standard mode of acquisition and/or to hide advanced parameters from the final user. Examples of parameter files are available in the directory \verb=examples=.
|
||||
\item[settings sett]
|
||||
Configures the settings of the detector. Refer to detailed detector documentation for more details: \\
|
||||
for MYTHEN sett can be: standard, fast, highgain;\\
|
||||
for GOTTHARD sett can be: veryhighgain, highgain, mediumgain, lowgain, dynamicgain;\\
|
||||
for \E sett can be: standard, highgain, lowgain.
|
||||
\item[threshold ev]
|
||||
For photon counting detectors, sets the detector threshold in eV. The detector should be properly calibrated, otherwise standard calibration coefficients are used, which can give an uncertainty up to a few keVs.
|
||||
\item[timing sync]
|
||||
Sets the timing mode of the detector. Can be auto, gating (works only if at least one of the signals is configured as gate\_in), trigger (works only if at least one of the signals is configured as trigger\_in), ro\_trigger (works only if at least one of the signals is configured as ro\_trigger\_in), triggered\_gating (works only if one of the signals is configured as gate\_in and one as trigger\_in). \\
|
||||
Refer to the detailed documentation to understand how the different timing modes work.
|
||||
\item[outdir path]
|
||||
Defines the path where the output files will be saved to.
|
||||
\item[fname prefix]
|
||||
Defines the prefix of the file name for the data output. \\
|
||||
The final file name will be: \\
|
||||
\verb=prefix[_d=\textit{d}\verb=][_S=\textit{v0}\verb=][_s=\textit{v1}\verb=][_p=\textit{p}\verb=][_f=\textit{f}\verb=]_=\textit{i}\verb=.=\textit{ext}\\
|
||||
where: \\
|
||||
\textit{d} is the controller index, in case of data receiver and more than one controller;\\
|
||||
\textit{v0} is the scan0 variable with the desired precision, if scan0 is enabled;\\
|
||||
\textit{v1} is the scan1 variable with the desired precision, if scan1 is enabled;\\
|
||||
\textit{p} is the position index, if different positions are configured;\\
|
||||
\textit{f} is the frame index of the first frame stored in the file, if many frames and triggers are configured;\\
|
||||
\textit{i} is the file index;\\
|
||||
\textit{ext} is the file extension e.g. \textit{.raw} for MYTHEN and \E raw data, \textit{.dat} for MYTHEN processed data.
|
||||
\item[index i] Sets the starting index of the file i at the beginning of the acquisition (automatically incremented for each measurement).
|
||||
\item[enablefwrite b] Enables (1) or disables (0) file writing.
|
||||
\item[exptime ts]
|
||||
Sets the exposure time of a single acquisition to ts (in s). It is overridden in case the detector is in gating mode. \\
|
||||
Refere to detailed documentation to understand how the different timing modes work.
|
||||
\item[subexptime ts]
|
||||
Sets the subexposure time of a single subacquisition to ts (in s) in \E autosumming mode (=\textit{dr 32}). Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[period ts]
|
||||
Sets the frames period (in s). It is overridden in case the detector is in gating mode. \\
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[delay ts]
|
||||
Sets the delay after trigger in triggered mode (in s).\\
|
||||
Refer to the detailed documentation to understand how the different timing modes work.
|
||||
\item[gates n]
|
||||
Sets the number of gates per frame in gated (stroboscopic) mode.\\
|
||||
Refer to the detailed documentation to understand how the different timing modes work.
|
||||
\item[frames n]
|
||||
Sets the number of frames acquired sequentially per cycle (e.g. after each trigger), with the exposure time defined by exptime and the period defined by period (unless in gated mode). The frame index in the output file name will automatically be incremented.\\
|
||||
Note that the total number of images will be frames times triggers. Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[triggers n]
|
||||
Sets the number of triggers (e.g. number of triggers). The frame index in the output file name will automatically be incremented. \\
|
||||
Note that the total number of images will be by frames times triggers. Refer to the detailed documentation to understand how the different timing modes work.
|
||||
\item[probes] Sets the number of probes to accumulate for stroboscopic measurements. \\
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[measurements] Sets the number of repetitions of the acquisitions (non real time!). The file index in the file name will be automatically incremented.\\
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[dr n] Sets the dynamic range n (in bits) of the data for a photon counting detector. For \E it can be set to 4, 8, 16 (but the real counter depth will still be limited to 12 bits) or 32 when one wants to activate the internal subframe summing mode.
|
||||
|
||||
\item[flags s] Sets some particular flags for your detector. For MYTHEN s can be \textit{none}, \textit{storeinram} (for buffered readout) or \textit{tot} (for time over threshold). For \E, s can be {\it{continous}} (for continous readout- still buffer on memories happens), \textit{storeinram} (for buffered readout. Do not use as has no graet advantages), \textit{parallel} for parallel exposure to the next frame and readout of the previous frame, \textit{nonparallel} to decouple sequentially readout and exposure, \textit{safe} (rowclock interleaved).
|
||||
%\item[timestamp]
|
||||
\item[help cmd] Returns the help for command cmd.
|
||||
\item[lock] Locks (1) or unlocks (0) the detector to this particular control PC. An be unlocked again only from the same PC or by rebooting the detector.
|
||||
%\item[lastclient]
|
||||
\item[nmod n] Sets the number of modules for the detector to n for partial readout. Will be replaced by ROI.
|
||||
%\item[maxmod]
|
||||
\end{description}
|
||||
|
||||
\subsection{Postprocessing commands}
|
||||
\begin{description}
|
||||
\item[flatfield fname] Sets the flat field file name. File ffdir/fname will be used to calculate the flat field coefficients. \textit{none} to unset flat field corrections.
|
||||
\item[ratecorr ns] Sets the deadtime to be used for rate corrections in ns. 0 to unset, -1 to use default dead time for the actual settings.In the case of \E, as online data rate correctiosn are applied, then a correction table has to be calculated every time the rate correction $\tau$ is changed, activated, or the subexposure time is changed.
|
||||
|
||||
\end{description}
|
||||
|
||||
\subsubsection{Angular conversion}
|
||||
|
||||
\begin{description}
|
||||
\item[fineoff deg] Sets the fine offset for the experiment.
|
||||
\item[samplex mm] Sets the sample displacement from the center of the diffractometer in the X-ray direction, to improve angular conversion (unused).
|
||||
\item[sampley mm] Sets the sample displacement from the center of the diffractometer in the ortogonal direction, to improve angular conversion (unused)
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
\subsection{Acquisition}
|
||||
See SLS Detectors Documentation for a detailed description of the acquisition flow.
|
||||
\begin{description}
|
||||
\item[positions n p1 p2...pn] Sets the number of positions n and their value.
|
||||
\item[startscript s] Sets the script to be executed at the beginning of each measurement. \textit{none} unsets.
|
||||
\item[startscriptpar p] Sets the parameter to be passed to the start script
|
||||
\item[stopscript s] Sets the script to be executed at the end of each measurement. \textit{none} unsets.
|
||||
\item[stopscriptpar p] Sets the parameter to be passed to the stop script.
|
||||
\item[scriptbefore s] Sets the script to be executed before each acquisition. \textit{none} unsets.
|
||||
\item[scriptbeforepar p] Sets the parameter to be passed to the script before.
|
||||
\item[scriptafter s] Sets the script to be executed after each acquisition. \textit{none} unsets.
|
||||
\item[scriptafterpar p] Sets the parameter to be passed to the script after.
|
||||
\item[headerbefore s] Sets the script to be executed to acquire the header of the acquisition. \textit{none} unsets.
|
||||
\item[headerbeforepar p] Sets the parameter to be passed to the header before.
|
||||
\item[headerafter s] Sets the script to be executed to append to the header of the acquisition. \textit{none} unsets.
|
||||
\item[headerafterpar p] Sets the parameter to be passed to the header after.
|
||||
\item[scan0scripts s] Sets the script to execute at scan 0 level. \textit{none} unsets, \textit{threshold, energy, trimbits, position} perform the corresponding scans without need of a custom script.
|
||||
\item[scan0par p] Sets a parameter to be passed to the scan 0 level script.
|
||||
\item[scan0prec i] Sets the number of decimal digits for the scan0 level parameter in the file name (default is 0).
|
||||
\item[scan0steps n s1 s2..sn] Sets the number of scan 0 level steps n and their value.
|
||||
\item[scan0range min max step] Sets the minimum, the maximum and the step for the scan 0 level steps (easier to use than scan0steps if equally spaced steps in a range)
|
||||
\item[scan1script s] Sets the script to execute at scan 1 level. \textit{none} unsets, \textit{threshold, energy, trimbits, position} perform the corresponding scans without need of a custom script.
|
||||
\item[scan1par p] Sets a parameter to be passed to the scan 1 level script.
|
||||
\item[scan1prec i] Sets the number of decimal digits for the scan1 level parameter in the file name (default is 0).
|
||||
\item[scan1steps n s1 s2...sn] Sets the number of scan 0 level steps n and their value.
|
||||
\item[scan1range min max step] Sets the minimum, the maximum and the step for the scan 0 level steps (easier to use than scan0steps if equally spaced steps in a range)
|
||||
\end{description}
|
||||
|
||||
\begin{comment}
|
||||
\subsection{Debug}
|
||||
|
||||
\begin{description}
|
||||
\item[moduleversion]
|
||||
\item[detectornumber]
|
||||
\item[modulenumber]
|
||||
\item[detectorversion]
|
||||
\item[softwareversion]
|
||||
\item[thisversion]
|
||||
\item[detectorsvnversion]
|
||||
\item[digitest]
|
||||
\item[bustest]
|
||||
\item[acqtest]
|
||||
\end{description}
|
||||
\end{comment}
|
||||
\subsection{Advanced commands}
|
||||
|
||||
|
||||
\subsubsection{Calibration}
|
||||
This operations should be performed only rarely to configure the detector
|
||||
|
||||
\begin{description}
|
||||
\item[trim:mode fname] Trims the detector according to mode (can be noise, beam, improve, fix) and saves the resulting trimbits to file fname. Take care to set a proper exptime and vthreshold before trimming.
|
||||
\item[encallog b] Sets (1) or unsets (0) the logging for energy calibration.
|
||||
\item[angcallog b] Sets (1) or unsets (0) the logging for angular calibration.
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
|
||||
\subsubsection{Acquisition}
|
||||
|
||||
It is normally recommended to use \verb=sls\_detector\_acquire [j-]=, which takes care of everything
|
||||
\begin{description}
|
||||
%\item[acquire] It is normally reccomended to use \verb=sls\_detector\_acquire [j-]=, which takes care of everything
|
||||
%\item[data]
|
||||
%\item[frame]
|
||||
\item[status s] Starts (start) or stops (stop) the detector acquisition.
|
||||
\item[online b] Sets the detector in online (1) or offline (0) mode.
|
||||
%\item[checkonline]
|
||||
%\item[readctr i fname] GOTTHARD related - reads counter in detector to file fname, restarts acquisition if i=1
|
||||
\item[resetctr i] GOTTHARD- ADVANCED- resets counter in detector, restarts acquisition if i=1
|
||||
\item[resmat i] \E - ADVANCED - resets counter in detector before the following acquisition. Default settings is \textit{resmat 1}. \textit{resmat 0} does not reset the counter bit before the acquisition. Note that in \E the counter is always reset after the acquisition.
|
||||
%\item[exptimel]
|
||||
%\item[periodl]
|
||||
%\item[delayl]
|
||||
%\item[gatesl]
|
||||
%\item[framesl]
|
||||
%\item[triggersl]
|
||||
%\item[frameindex]
|
||||
%\item[now]
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
\subsubsection{Configuration}
|
||||
Advanced commands to configure the detector system. Should be left to the configuration file
|
||||
\begin{description}
|
||||
\item[type s] Sets the types of detector controllers in the system. Can be Mythen, Gotthard, \E and multiple controllers should be catenated with a + (e.g. Mythen+Mythen for 2 Mythen controllers).
|
||||
\item[d:hostname s] Sets the hostname or IP address for the controller d, where d is the controller index within the detector structure.
|
||||
\item[d:extsig:i s] Configures the usage of the external IO signals to synchronize the detectors. s can be: off, gate\_in\_active\_high, gate\_in\_active\_low, trigger\_in\_rising\_edge,
|
||||
trigger\_in\_falling\_edge,
|
||||
ro\_trigger\_in\_rising\_edge,
|
||||
ro\_trigger\_in\_falling\_edge,
|
||||
gate\_out\_active\_high,
|
||||
gate\_out\_active\_low,
|
||||
trigger\_out\_rising\_edge,
|
||||
trigger\_out\_falling\_edge,
|
||||
ro\_trigger\_out\_rising\_edge,
|
||||
ro\_trigger\_out\_falling\_edge, sync. \\Usually left to the configuration file. Gating, triggering etc. are enabled only by calling the timing command. \\
|
||||
Please refer to SLS Detectors FAQ documentation for more detailed information about the usage.
|
||||
|
||||
\item[master i] Sets the master of a multi-controller detector to the controller with index i. -1 removes master. Setting a master is useful only if the controllers are synchronized via hardware using the external IO signals. Usually left to the configuration file. Please refer to SLS Detectors FAQ documentation for more detailed information about the usage.
|
||||
\item[sync s] Sets the synchronization mode of the various controller within a detector structure. s acn be none, gating, trigger, complementary. Check that the detectors are correctly connected to avoid freezing of the acquisition. Usually left to the configuration file. Please refer to SLS Detectors FAQ documentation for more detailed information about the usage.
|
||||
\item[trimdir s] Obsolete. Same ad settingsdir.
|
||||
\item[settingsdir s] Sets the path of the drectory where the trim/settings files are stored. Usually left to the configuration file.
|
||||
\item[caldir s] Sets the path of the drectory where the calibration files are stored. Can be the same as settingsdir. Usually left to the configuration file.
|
||||
\item[trimen n e1 e2 ...en] Unused. Sets the list of energies for which trimfiles exist.
|
||||
\item[port p] Sets the port used by the sockets to control the detector. Do not change! Usually left to the configuration file.
|
||||
\item[stopport p] Sets the port used by the sockets to stop/get the status of the detector. Do not change! Usually left to the configuration file.
|
||||
\item[add s] Avoid using it. Adds the controller s to the detector structure.
|
||||
\item[remove i] Avoid using it. Removes the controller in position i from the detector structure.
|
||||
\item[id:i l] Avoid using it. configures the id of the detector structure. i is the detector position in a multi detector system and l is the id of the detector to be added.
|
||||
\item[free i] Avoid using it. Frees the shared memory.
|
||||
\item[exitserver] Avoid using it. Turns off the communication server on the detector.
|
||||
\end{description}
|
||||
|
||||
|
||||
\subsubsection{Receiver - GOTTHARD/\E}
|
||||
\begin{description}
|
||||
\begin{comment}
|
||||
|
||||
\item[receiverip ip] sets receiver ip to ip. Should be left to the configuration file.
|
||||
%\item[receivermac] sets receiver mac to mac. Should be left to the configuration file.
|
||||
\item[servermac mac] sets server mac to mac. Should be left to the configuration file.
|
||||
%\item[configuremac i] configures the MAC of the detector. i is adc number. -1 for all adcs. Should be left to the configuration file.
|
||||
\item[dataport i] sets the communication port to the receiver. Should be left to the configuration file.
|
||||
|
||||
\end{comment}
|
||||
\item[detectormac mac] sets the mac of the detector udp interface to mac (if configurable). Should be left to the configuration file.
|
||||
\item[rx\_tcpport i] sets the communication port between client and receiver. Should be left to the configuration file.
|
||||
\item[rx\_udpport i] sets the communication port between detector and receiver. Should be left to the configuration file.
|
||||
\item[rx\_hostname s] sets the hostname (or IP address) of the receiver for the TCP/IP interface with the client.
|
||||
\item[rx\_udpip ip] sets the IP address of the receiver for the UDP interface with the detector.
|
||||
\item[rx\_fifodepth v] sets receiver fifo depth to value v. Default for \E is 100 frames betweeen listening and writing.
|
||||
\item[r\_online b] sets the receiver in online (1) or offline (0) mode.
|
||||
%\item[r\_checkonline]
|
||||
%\item[framescaught]
|
||||
\item[r\_lock b] Locks (1) or unlocks (0) the receiver to this PC.
|
||||
%\item[r\_lastclient]
|
||||
\item[receiver s] starts/stops the receiver to listen to detector packets. - can be start or stop
|
||||
\end{description}
|
||||
|
||||
\subsubsection{Postprocessing}
|
||||
Some advanced commands to configure data postprocessing.
|
||||
\begin{description}
|
||||
\item[ffdir dir] Sets the directory where the flat field files are stored. Normally left to the configuration file.
|
||||
\item[darkimage fname] GOTTHARD- ADVANCED- Sets fname as dark image file for the detector.
|
||||
\item[gainimage fname] GOTTHARD- ADVANCED- Sets fname as gain image file for the detector.
|
||||
\item[badchannels fname] Sets the bad channel file to fname. Bad channels will be omitted in the .dat file. \textit{none} to unset. Normally left to the configuration file.
|
||||
\item[threaded b] Avoid changing it. Sets if the data are written to disk in parallel with the acquisition (1) or after the acquisition (0). Normally left to the configuration file.
|
||||
\end{description}
|
||||
|
||||
|
||||
\textbf{Angular conversion}
|
||||
|
||||
\begin{description}
|
||||
\item[globaloff deg] Sets the offset of the beamline i.e. angular position of channel 0 when angular encoder at 0. Normally left to the configuration file.
|
||||
\item[angconv fname] Sets the file with the coefficients for angular conversion. \textit{none} disables angular conversion. Normally left to the configuration file.
|
||||
\item[binsize deg] Sets the size of the angular bins for angular coversion. Normally left to the configuration file.
|
||||
\item[angdir i] Sets the angular direction of the detector (1 means channel number in the same direction as the angular encoder, -1 different direction). Normally left to the configuration file.
|
||||
\item[d:moveflag i] Related to a single controller d. 1 if the detector modules move with the angular encoder, 0 if they are static (useful for multidetector systems). Normally left to the configuration file.
|
||||
\end{description}
|
||||
|
||||
\subsubsection{Testing - \E specific}
|
||||
Some VERY ADVANCED testing functions implemented for \E:
|
||||
\begin{description}
|
||||
\item [pulsechip n] sets the chip into test mode with \textit{resmat} = 0 and \textit{externalenable} =1. Pulses chip by togglying the enable n number of times. The acquire is then done with no pixel matrix reset before the acquisition. If n$=-1$, the chip will be set into normal mode. This is necessary to restore normal chip operations after the test.
|
||||
\item[pulse n x y] Pulses pixel at coordinates (x,y) n number of times.
|
||||
\item[pulsenmove n x y] Pulses pixel n number of times and moves relatively by x value (x axis) and y value (y axis)
|
||||
\end{description}
|
||||
|
||||
\subsection{Detector settings}
|
||||
Advanced settings changing the analog or digital performance of the acquisition. Use them only if you are sure of what you are doing!
|
||||
|
||||
\begin{description}
|
||||
\item[vthreshold n] Sets the DAC value of the detector threshold to n.
|
||||
\item[vcalibration n] Sets the DAC value of the calibration pulse amplitude to n.
|
||||
\item[vtrimbit n] Sets the DAC value defining the trimbits LSB size to n.
|
||||
\item[vpreamp n] Sets the DAC value of the preamp feedback to n.
|
||||
\item[vshaper1 n] Sets the DAC value of the shaper1 feedback to n.
|
||||
\item[vshaper2 n] Sets the DAC value of the shaper2 feedback to n.
|
||||
\item[highvoltage n] Sets the DAC value of the high voltage to n (in V).
|
||||
\item[vapower n] CHIPTEST BOARD ONLY - Sets the DAC value of the analog voltage to n.
|
||||
\item[vddpower n] CHIPTEST BOARD ONLY - Sets the DAC value of the analog voltage to n.
|
||||
\item[vshpower n] CHIPTEST BOARD ONLY - Sets the comparator power supply in dac units (0-1024).
|
||||
\item[viopower n] CHIPTEST BOARD ONLY - Sets the FPGA I/O power supply in dac units (0-1024).
|
||||
\item[vref\_ds n] Sets vrefds
|
||||
\item[vcascn\_pb n] Sets vcascn\_pb
|
||||
\item[vcascp\_pb n] Sets vcascp\_pb
|
||||
\item[vout\_cm n] Sets vout\_cm
|
||||
\item[vcasc\_out n] Sets vcasc\_out
|
||||
\item[vin\_cm n] Sets vin\_cm
|
||||
\item[vref\_comp n] Sets vref\_comp
|
||||
\item[ib\_test\_c n] Sets ib\_test\_c
|
||||
\item[vsvp n] Sets vsvp DAC to n
|
||||
\item [vsvn n] Sets vsvn DAC to n
|
||||
\item [vtr n] Sets vtr DAC to n
|
||||
\item [vrf n] Sets vrf DAC to n
|
||||
\item [vrs n] Sets vrs DAC to n
|
||||
\item [vtgstv n] Sets vtgstv DAC to n
|
||||
\item[vcmp\_ll n] Sets vcmp\_ll DAC to n
|
||||
\item [vcmp\_lr n] Sets vcmp\_lr DAC to n
|
||||
\item [vcmp\_rl n] Sets vcmp\_rl DAC to n
|
||||
\item [vcmp\_rr n] Sets vcmp\_rr DAC to n
|
||||
\item [vcall n] Sets vcall DAC to n
|
||||
\item [rxb\_rb n] Sets rxb\_rb DAC to n
|
||||
\item [rxb\_lb n] Sets rxb\_rb DAC to n
|
||||
\item [vcp n] Sets vcp DAC to n
|
||||
\item [vcn n] Sets vcn DAC to n
|
||||
\item [vis n] Sets vis DAC to n
|
||||
\item [iodelay n] Sets iodelay to n
|
||||
%\item[temp\_adc n] Sets
|
||||
%\item[temp\_fpga n]
|
||||
\item[reg a d] Write to register of address a the data d
|
||||
\item[clkdivider n] Sets the clock divider for the readout. Can be increased for longer cables. For \E options are 0 (full speed), 1 (half speed), 2 (quarter speed), and 3 (slow).
|
||||
\item[setlength n] Changes the length of the set/reset signals in the acquisition. Never reduce it!
|
||||
\item[waitstates n] Sets the wait states for CPU/FPGA communication. Do not change it!
|
||||
\item[totdivider n] Sets the tot clock divider.
|
||||
\item[totdutycycle n] Sets the tot duty cycle.
|
||||
\item[setup s] Loads the setup files to the detector (config, parameters, trimbits etc.).
|
||||
\item[trimbits fn] Loads the trimbit files fn.snxxx to the detector
|
||||
\end{description}
|
||||
|
||||
|
||||
\subsection{Debug}
|
||||
\begin{description}
|
||||
\item[digibittest i] only for GOTTHARD. If i=1, the acquisition will return a unique channel identifier, instead of data, if i=0 normal acquisition.
|
||||
\end{description}
|
||||
|
||||
|
||||
\section{Retrieving detector parameters}
|
||||
|
||||
|
||||
\verb=sls\_detector\_get [j-][i:]var [arg]=\\
|
||||
|
||||
is used to retrieve the detector parameters \verb=var=.\\
|
||||
For some commands, an additional argument \verb=arg= is needed.
|
||||
|
||||
|
||||
|
||||
\subsection{Standard commands}
|
||||
All the commends return two strings, where string1 is the command, string2 is teh actual returned string.
|
||||
|
||||
\begin{description}
|
||||
\item[config fname]
|
||||
Dumps the current configuration of the detector to the file fname.
|
||||
\item[parameters fname]
|
||||
Dumps the current acquisition parameters of the detector to the file fname.
|
||||
\item[settings]
|
||||
Returns the current settings of the detector. Returns a string
|
||||
|
||||
\item[threshold]
|
||||
For photon counting detectors, returns the detector threshold in eV, -1 if undefined. Returns ``threshold value\_in\_eV''. If it fails, the returned threshold is the old set value.
|
||||
|
||||
\item[timing]
|
||||
Returns the acquisition timing mode of the detector.
|
||||
Refer to the detailed documentation to understand how the different timing modes work.
|
||||
\item[outdir]
|
||||
Returns the path where the output files are saved to.
|
||||
\item[fname]
|
||||
Returns the prefix of the file name for the data output.
|
||||
\item[enablefwrite] Returns if data are written to file (1) or not (0).
|
||||
\item[exptime]
|
||||
Returns the exposure time of a single acquisition in seconds. Example: "exptime 1.000000000''
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[period]
|
||||
Returns the frames period (in s). Example: ``period 1.000000000''
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[delay]
|
||||
Returns the delay after trigger in triggered mode (in s).
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[gates]
|
||||
Returns the number of gates per frame in gated (stroboscopic) mode.
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[frames]
|
||||
Returns the number of frames acquired sequentially per cycle (e.g. after each trigger), with the exposure time defined by exptime and the period defined by period (unless in gated mode). Returned as a string to be interpreted as an integer ``frames integer''
|
||||
Note that the total number of images is frames times triggers.
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[triggers n]
|
||||
Returns the number of triggers (e.g. number of triggers). Returned as atring to be interpreted as an integer ``triggers integer''
|
||||
Note that the total number of images is frames times triggers.
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[probes] Returns the number of probes to accumulate for stroboscopic measurements.
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[measurements] Returns the number of repetitions of the acquisitions (non real time!).
|
||||
Refer to detailed documentation to understand how the different timing modes work.
|
||||
\item[dr] Returns the dynamic range n (in bits) of the data for a photon counting detector. Returns a string that should be interpreted as an integer.
|
||||
|
||||
\item[flags s] Returns the flags set for your detector.
|
||||
\item[help cmd] Returns the help for command cmd.
|
||||
\item[lock] Returns if the detector is locked to a single PC.
|
||||
\item[lastclient] Returns the last client which has connected to the detector.
|
||||
\item[nmod n] Returns the number of modules which are read out. Will be replaced by ROI.
|
||||
\item[maxmod] Returns the maximum number of modules (size) of the detector. Will be replaced by size.
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
\subsection{Postprocessing commands}
|
||||
\begin{description}
|
||||
\item[flatfield] Returns the flat field file name.
|
||||
\item[ratecorr] Returns the dead time used for rate corrections.
|
||||
\end{description}
|
||||
|
||||
|
||||
\subsubsection{Angular conversion}
|
||||
|
||||
\begin{description}
|
||||
\item[fineoff] Returns the fine offset used to convert channel number to angles
|
||||
\item[samplex] Returns the sample displacement from the center of the diffractometerin the X-ray direction, to improve angular conversion (unused).
|
||||
\item[sampley] Returns the sample displacement from the center of the diffractometer in the ortogonal direction, to improve angular conversion (unused)
|
||||
\end{description}
|
||||
|
||||
\subsection{Acquisition}
|
||||
See SLS Detectors Documentation for a detailed description of the acquisition flow.
|
||||
\begin{description}
|
||||
\item[positions] Returns the number of positions n and their value.
|
||||
\item[startscript] Returns the script to be executed at the beginning of each measurement.
|
||||
\item[startscriptpar] Returns the parameter to be passed to the start script
|
||||
\item[stopscript] Returns the script to be executed at the end of each measurement.
|
||||
\item[stopscriptpar] Returns the parameter to be passed to the stop script.
|
||||
\item[scriptbefore] Returns the script to be executed before each acquisition.
|
||||
\item[scriptbeforepar] Returns the parameter to be passed to the script before.
|
||||
\item[scriptafter] Returns the script to be executed after each acquisition.
|
||||
\item[scriptafterpar] Returns the parameter to be passed to the script after.
|
||||
\item[headerbefore] Returns the script to be executed to acquire the header of the acquisition.
|
||||
\item[headerbeforepar] Returns the parameter to be passed to the header before.
|
||||
\item[headerafter] Returns the script to be executed to append to the header of the acquisition.
|
||||
\item[headerafterpar] Returns the parameter to be passed to the header after.
|
||||
\item[scan0scripts] Returns the script to execute at scan 0 level.
|
||||
\item[scan0par] Returns a parameter to be passed to the scan 0 level script.
|
||||
\item[scan0prec] Returns the number of decimal digits for the scan0 level parameter in the file name (default is 0).
|
||||
\item[scan0steps] Returns the number of scan 0 level steps n and their value.
|
||||
\item[scan0range] Same as scan0steps.
|
||||
\item[scan1script] Returns the script to execute at scan 1 level.
|
||||
\item[scan1par] Returns a parameter to be passed to the scan 1 level script.
|
||||
\item[scan1prec] Returns the number of decimal digits for the scan1 level parameter in the file name (default is 0).
|
||||
\item[scan1steps] Returns the number of scan 0 level steps n and their value.
|
||||
\item[scan1range] Same as scan1steps.
|
||||
\end{description}
|
||||
|
||||
\subsection{Debug}
|
||||
Commands to be used to retrieve information about the detector version or perform tests.
|
||||
\subsubsection{Version}
|
||||
\begin{description}
|
||||
\item[moduleversion[:i]] Returns the version of the module firmware.
|
||||
\item[detectornumber] Returns the serial number of the module (normally the MAC address).
|
||||
\item[modulenumber[:i]] Returns the serial number of the module i.
|
||||
\item[detectorversion] Returns the version of the controller firmware.
|
||||
\item[softwareversion] Returns the version of the software running on the detector.
|
||||
\item[thisversion] Returns the version of the control software which is being used.
|
||||
\item[detectorsvnversion] Returns the SVN version of the software on the detector.
|
||||
\end{description}
|
||||
|
||||
\subsubsection{Tests}
|
||||
|
||||
\begin{description}
|
||||
\item[digitest[:i]] Makes a digital test of module i. Afterwards the detector must be reconfigured for the acquisition (settings, threshold, exptime, dr, frames etc.). Returns 0 if succeeded, otherwise an error mask.
|
||||
\item[bustest] Makes a digital test of the communication between CPU and FPGA. Returns 0 if succeeded, otherwise the number of errors.
|
||||
%\item[digibittest] GOTTHARD?!?!??!
|
||||
%\item[acqtest] GOTTHARD?!?!??!
|
||||
%\item[test] GOTTHARD?!?!??!
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
\subsection{Advanced commands}
|
||||
|
||||
|
||||
\subsubsection{Calibration}
|
||||
This operations should be performed only rarely to configure the detector
|
||||
|
||||
\begin{description}
|
||||
\item[encallog] returns whether the logging for energy calibration is enabled.
|
||||
\item[angcallog] returns whether the logging for angular calibration is enabled.
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
|
||||
\subsubsection{Acquisition commands}
|
||||
|
||||
It is normally recommended to use \verb=sls\_detector\_acquire [j-]=, which takes care of everything
|
||||
\begin{description}
|
||||
\item[acquire] Same as \verb=sls\_detector\_acquire=
|
||||
\item[data] Gets, saves and processes all data stored on the detector, if any.
|
||||
\item[frame] Gets, saves and processes one frame stored on the detector, if any in a Firt-In/First-Out mode.
|
||||
\item[status] Returns the detector status - can be: running, error, transmitting, finished, waiting or idle
|
||||
\item[online] Returns whether the detector is in online or offline mode.
|
||||
\item[checkonline] Returns whether the detector is in online or offline mode.
|
||||
\item[readctr i fname] GOTTHARD related - reads counter in detector to file fname, restarts acquisition if i=1
|
||||
%\item[resetctr i] GOTTHARD- ADVANCED- resets counter in detector, restarts acquisition if i=1
|
||||
\item[exptimel] Returns the exposure time left for the current frame.
|
||||
\item[periodl] Returns the period left for the current frame.
|
||||
\item[delayl] Returns the delay after trigger left for the current frame.
|
||||
\item[gatesl] Returns the number of gates left for the current frame.
|
||||
\item[framesl] Returns the number of frames left for the current cycle.
|
||||
\item[triggersl] Returns the number of triggers left for the current acquisition.
|
||||
\item[now] Returns the current timestamp of the detector clock.
|
||||
\item[timestamp] Returns the timestamp of the acquisitions in a First-In/First-Out mode i.e. every time it is called it returns the timestamp of the first acquisition start of readout. The FIFO is reset everytime the acquisition is started.
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
\subsubsection{Configuration}
|
||||
Advanced commands to configure the detector system. Should be left to the configuration file
|
||||
\begin{description}
|
||||
\item[type] Returns the types of detector controllers in the system.
|
||||
\item[hostname] Returns the hostnames or IP addresses for the detector
|
||||
\item[d:extsig:i] Returns the usage of the external IO signal i of the controller d.
|
||||
\item[master] Returns the master of the acquisition in a multicontroller detector. -1 is none.
|
||||
\item[sync] Returns the synchronization mode of the various controller within a detector structure.
|
||||
\item[trimdir] Same ad settingsdir.
|
||||
\item[settingsdir] Returns the path of the directory where the trim/settings files are stored.
|
||||
\item[caldir] Returns the path of the directory where the calibration files are stored.
|
||||
\item[trimen n e1 e2 ...en] Unused. Returns the list of energies for which trimfiles exist.
|
||||
\item[port] Returns the port used by the sockets to control the detector.
|
||||
\item[stopport]Returns the port used by the sockets to stop/get the status of the detector.
|
||||
%\item[add s] Avoid using it. Adds the controller s to the detector structure.
|
||||
%\item[remove i] Avoid using it. Removes the controller in position i from the detector structure.
|
||||
\item[id[:i]] returns the id of the detector structure. i is the detector position in a multi detector system
|
||||
\item[free] Avoid using it. Frees the shared memory.
|
||||
\end{description}
|
||||
Settable communication parameters:
|
||||
\begin{description}
|
||||
\item[txndelay\_left] \E advanced: Set transmission delay of sending the left port frame
|
||||
\item[txndelay\_right] \E advanced: Set transmission delay of sending the right port frame
|
||||
\item[txndelay\_frame] \E advanced: Set transmission delay of sending the entire frame In addition to left and right. This value has to be greater than the maximum of the transmission delays of each port.
|
||||
\end{description}
|
||||
|
||||
|
||||
\subsubsection{Receiver - GOTTHARD only}
|
||||
\begin{description}
|
||||
%\item[receiverip] Returns receiver ip.
|
||||
%\item[receivermac]Returns the receiver mac.
|
||||
%\item[servermac] Returns the server mac.
|
||||
%\item[dataport] Returns the communication port to the receiver.
|
||||
|
||||
|
||||
|
||||
\item[detectormac] returns the mac of the detector udp interface to mac (if configurable). Should be left to the configuration file.
|
||||
\item[rx\_tcpport] returns the communication port between client and receiver. Should be left to the configuration file.
|
||||
\item[rx\_udpport] returns the communication port between detector and receiver. Should be left to the configuration file.
|
||||
\item[rx\_hostname] returns the hostname (or IP address) of the receiver for the TCP/IP interface with the client.
|
||||
\item[rx\_udpip] returns the IP address of the receiver for the UDP interface with the detector.
|
||||
|
||||
\item[r\_online b] Returns whether the receiver in online (1) or offline (0) mode.
|
||||
\item[r\_checkonline] Returns whether the receiver in online (1) or offline (0) mode.
|
||||
\item[framescaught] Returns the number of frames received. Returns: "framescaught n''
|
||||
\item[resetframescaught n] Sets the number of frames received to 1
|
||||
\item[frameindex] Returns the index of the last frame received.
|
||||
\item[r\_lock] Returns whether the receiver is locked (1) or unlocked (0).
|
||||
\item[r\_lastclient] Returns the IP of the last client which connected to the receiver.
|
||||
%\item[receiver s ] starts/stops the receiver to listen to detector packets. - can be start or stop
|
||||
\end{description}
|
||||
|
||||
\subsubsection{Postprocessing}
|
||||
Some advanced commands to configure data postprocessing.
|
||||
\begin{description}
|
||||
\item[ffdir] Returns the directory where the flat field files are stored.
|
||||
\item[darkimage fname] GOTTHARD- ADVANCED- Returns the dark image file for the detector.
|
||||
\item[gainimage fname] GOTTHARD- ADVANCED- Returns gain image file for the detector.
|
||||
\item[badchannels fname] Returns bad channel file to fname.
|
||||
\item[threaded b] Returns whether the data are written to disk in parallel with the acquisition (1) or after the acquisition (0).
|
||||
\end{description}
|
||||
|
||||
|
||||
\textbf{Angular conversion}
|
||||
|
||||
\begin{description}
|
||||
\item[globaloff] Returns the offset of the beamline i.e. angular position of channel 0 when angular encoder at 0.
|
||||
\item[angconv] Returns the file used for the coefficients for angular conversion.
|
||||
\item[binsize] Returns the size of the angular bins for angular conversion.
|
||||
\item[angdir] Returns the angular direction of the detector (1 means channel number in the same direction as the angular encoder, -1 different direction).
|
||||
\item[d:moveflag] Related to a single controller d. Returns 1 if the detector modules move with the angular encoder, 0 if they are static (useful for multidetector systems).
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
\subsection{Detector settings}
|
||||
Advanced settings changing the analog or digital performance of the acquisition. Use them only if you are sure of what you are doing!
|
||||
|
||||
\begin{description}
|
||||
\item[vthreshold] Returns the DAC value of the detector threshold to n.
|
||||
\item[vcalibration] Returns the DAC value of the calibration pulse amplitude to n.
|
||||
\item[vtrimbit] Returns the DAC value defining the trimbits LSB size to n.
|
||||
\item[vpreamp] Returns the DAC value of the preamp feedback to n.
|
||||
\item[vshaper1] Returns the DAC value of the shaper1 feedback to n.
|
||||
\item[vshaper2] Returns the DAC value of the shaper2 feedback to n.
|
||||
\item[highvoltage] Returns the DAC value of the high voltage to n.
|
||||
\item[vapower] CHIPTEST BOARD ONLY - Returns the DAC value of the analog voltage to n.
|
||||
\item[vddpower] CHIPTEST BOARD ONLY - Returns the DAC value of the analog voltage to n.
|
||||
\item[vshpower] CHIPTEST BOARD ONLY - Returns the comparator power supply in dac units (0-1024).
|
||||
\item[viopower] CHIPTEST BOARD ONLY - Returns the FPGA I/O power supply in dac units (0-1024).
|
||||
\item[vref\_ds] Returns vrefds
|
||||
\item[vcascn\_pb] Returns vcascn\_pb
|
||||
\item[vcascp\_pb] Returns vcascp\_pb
|
||||
\item[vout\_cm] Returns vout\_cm
|
||||
\item[vcasc\_out] Returns vcasc\_out
|
||||
\item[vin\_cm] Returns vin\_cm
|
||||
\item[vref\_comp] Returns vref\_comp
|
||||
\item[ib\_test\_c] Returns ib\_test\_c
|
||||
\item[vsvp] Returns vsvp
|
||||
\item [vsvn] Returns vsvn
|
||||
\item [vtr] Returns vtr trim strength (\E)
|
||||
\item [vrf] Returns vrf preamp gain (\E)
|
||||
\item [vrs] Returns vrs shaper gain (\E)
|
||||
\item [vtgstv] Returns vtgstv (\E)
|
||||
\item[vcmp\_ll] Returns vcmp\_ll (\E) leftmost chip theshold
|
||||
\item [vcmp\_lr] Returns vcmp\_lr (\E) second to leftmost chip theshold
|
||||
\item [vcmp\_rl] Returns vcmp\_rl (\E) second to rightmost chip theshold
|
||||
\item [vcmp\_rr] Returns vcmp\_rr (\E) rightmost chip theshold
|
||||
\item [vcall] Returns vcall calibration stength (\E)
|
||||
\item [rxb\_rb] Returns rxb\_rb rightmost chip value to decode 0-1 in the readout
|
||||
\item [rxb\_lb] Returns rxb\_lb leftmost chip value to decode 0-1 in the readout
|
||||
\item [vcp] Returns vcp cascode p value (\E)
|
||||
\item [vcn] Returns vcn cascode n value (\E)
|
||||
\item [vis] Returns vis shaper current (\E)
|
||||
\item [iodelay] Returns iodelay
|
||||
\item[temp\_adc] Returns the temperature of the ADCs
|
||||
\item[temp\_fpga] Returns the temperature of the FPGA.
|
||||
\item[temp\_fpgaext] Returns the temperature close to the fpga (\E).
|
||||
\item[temp\_10ge] Returns the temperature close to the 10GE (\E).
|
||||
\item[temp\_dcdc] Returns the temperature close to the dc dc converter (\E).
|
||||
\item[temp\_sodl] Returns the temperature close to the left so-dimm memory (\E).
|
||||
\item[temp\_sodr] Returns the temperature close to the right so-dimm memory (\E).
|
||||
\item[temp\_fpgafl] Returns the temperature of the left front end board fpga (\E).
|
||||
\item[temp\_fpgafr] Returns the temperature of the right front end board fpga (\E).
|
||||
|
||||
\item[reg a] Write to register of address a the data d
|
||||
\item[clkdivider] Returns the clock divider for the readout.
|
||||
\item[setlength] Returns the length of the set/reset signals in the acquisition.
|
||||
\item[waitstates] Returns the wait states for CPU/FPGA communication.
|
||||
\item[totdivider] Returns the tot clock divider.
|
||||
\item[totdutycycle] Returns the tot duty cycle.
|
||||
\item[setup] Dumps all settings to file (config, parameters, trimbits etc.).
|
||||
\item[trimbits fn] Dumps the trimbits to the file files fn.snxxx
|
||||
\end{description}
|
||||
|
||||
|
||||
\section{Usage}
|
||||
|
||||
\subsection{Mandatory setup}
|
||||
First, your detector should always be configured for each PC that you might want to use for controlling the detector.
|
||||
To do that:
|
||||
\begin{verbatim}
|
||||
sls_detector_put config mydetector.config
|
||||
\end{verbatim}
|
||||
Refer to sample configuration files to produce the appropriate one for your detector.
|
||||
|
||||
One can configure all the detector settings in a parameter file {\tt{setup.det}}, which is loaded by doing:
|
||||
\begin{verbatim}
|
||||
sls_detector_put parameters setup.det
|
||||
\end{verbatim}
|
||||
|
||||
In the case of \E, the parameter file ({\tt{setup.det}} needs to setup the proper bias voltage of the sensor, i.e. needs to contain the line {\tt{highvoltage 150}}.
|
||||
|
||||
\subsection{Standard acquisition}
|
||||
|
||||
You will then need to setup the detector threshold and settings, the exposure time, the number of real time frames and eventually how many real time frames should be acquired:
|
||||
\begin{verbatim}
|
||||
sls_detector_put settings standard
|
||||
sls_detector_put threshold 6000
|
||||
sls_detector_put exptime 1.
|
||||
sls_detector_put frames 10
|
||||
\end{verbatim}
|
||||
In this case 10 consecutive 1s frames will be acquired.
|
||||
|
||||
You need to setup where the files will be written to
|
||||
\begin{verbatim}
|
||||
sls_detector_put outdir /scratch
|
||||
sls_detector_put fname run
|
||||
sls_detector_put index 0
|
||||
\end{verbatim}
|
||||
this way your files will all be named /scratch/run\_fj\_i.dat where j goes between 0 and 9 and is relative to the frame number, i starts from 0 and is automatically incremented. The next acquisition it will be 1.
|
||||
|
||||
|
||||
To acquire simply type
|
||||
\begin{verbatim}
|
||||
sls_detector_acquire
|
||||
\end{verbatim}
|
||||
|
||||
|
||||
You can poll the detector status using
|
||||
\begin{verbatim}
|
||||
sls_detector_get status
|
||||
\end{verbatim}
|
||||
|
||||
|
||||
\subsection{Data processing}
|
||||
Flat field and rate corrections can be applied directly by simply selecting:
|
||||
\begin{verbatim}
|
||||
sls_detector_put flatield myflatfield.raw
|
||||
sls_detector_put ratecorr -1
|
||||
\end{verbatim}
|
||||
|
||||
|
||||
\end{document}
|
||||
|
||||
Binary file not shown.
|
Before Width: | Height: | Size: 11 KiB |
Binary file not shown.
|
Before Width: | Height: | Size: 167 KiB |
@ -1,53 +0,0 @@
|
||||
DESTDIR?=../docs
|
||||
|
||||
|
||||
#manual-api manual-calwiz manual-client manual-gui manual-main
|
||||
|
||||
|
||||
TEX=latex
|
||||
|
||||
MAINTEXS= slsDetectorGuiHowTo.tex
|
||||
|
||||
|
||||
DVIS = $(MAINTEXS:.tex=.dvi)
|
||||
PSS = $(MAINTEXS:.tex=.ps)
|
||||
PDFS = $(MAINTEXS:.tex=.pdf)
|
||||
HTMLS = $(MAINTEXS:%.tex=%)
|
||||
|
||||
|
||||
all: pdf html
|
||||
echo $(PWD)
|
||||
echo $(PDFS)
|
||||
echo $(HTMLS)
|
||||
|
||||
pdf: $(PDFS)
|
||||
$(shell test -d $(DESTDIR) || mkdir -p $(DESTDIR))
|
||||
$(shell test -d $(DESTDIR)/pdf || mkdir -p $(DESTDIR)/pdf)
|
||||
mv $(PDFS) $(DESTDIR)/pdf
|
||||
|
||||
html: $(HTMLS)
|
||||
|
||||
$(HTMLS): $(MAINTEXS)
|
||||
$(shell test -d $(DESTDIR) || mkdir -p $(DESTDIR))
|
||||
$(shell test -d $(DESTDIR)/html || mkdir -p $(DESTDIR)/html)
|
||||
$(shell test -d $(DESTDIR)/html/$@ && rm -r $(DESTDIR)/html/$@)
|
||||
latex $@.tex
|
||||
latex2html -split 4 $@.tex
|
||||
mv $@ $(DESTDIR)/html
|
||||
|
||||
%.dvi : %.tex $(TEXS)
|
||||
latex $<
|
||||
latex $<
|
||||
|
||||
%.ps : %.dvi
|
||||
dvips -o $@ $<
|
||||
|
||||
|
||||
%.pdf : %.ps
|
||||
ps2pdf $< $@
|
||||
|
||||
|
||||
clean:
|
||||
rm -rf *.aux *.log *.toc *.out $(DVIS) $(PSS) $(PDFS) $(HTMLS)
|
||||
rm -rf $(DESTDIR)/html/slsDetectorGuiHowTo
|
||||
rm -rf $(DESTDIR)/pdf/slsDetectorGuiHowTo.pdf
|
||||
@ -1,59 +0,0 @@
|
||||
The slsDetectorGUI is based on Qt4 with Qwt libraries.
|
||||
|
||||
-Qt4.6 installation:
|
||||
|
||||
Download the opend source version:
|
||||
ftp://ftp.qt.nokia.com/qt/source/qt-everywhere-opensource-src-4.6.2.tar.gz
|
||||
|
||||
To install:
|
||||
gunzip qt-everywhere-opensource-src-4.6.2.tar.gz
|
||||
tar xvf qt-everywhere-opensource-src-4.6.2.tar
|
||||
./configure
|
||||
make
|
||||
make install
|
||||
|
||||
By default Qt4 will be installed int /usr/local/Trolltech/Qt-4.6.2/
|
||||
Edit your .bashrc:
|
||||
export QTDIR=/usr/local/Trolltech/Qt-4.6.2
|
||||
export PATH=$QTDIR/bin:$PATH
|
||||
export LD_LIBRARY_PATH=$QTDIR/lib:$LD_LIBRARY_PATH
|
||||
|
||||
If your system also have Qt3 installed, make sure that QTDIR, PATH and LD_LIBRARY_PATH point to Qt4 before installing Qwt (and of course compiling and running the GUI).
|
||||
|
||||
|
||||
|
||||
- Qwt5.2 installation
|
||||
|
||||
Download the sources:
|
||||
svn co https://qwt.svn.sourceforge.net/svnroot/qwt/branches/qwt-5.2
|
||||
|
||||
To install:
|
||||
cd qwt-5.2
|
||||
qmake
|
||||
make
|
||||
make install
|
||||
|
||||
By default Qwt will be installed in /usr/local/qwt-5.2.3-svn/
|
||||
Edit your .bashrc:
|
||||
export QWTDIR=/usr/local/qwt-5.2.3-svn/
|
||||
export LD_LIBRARY_PATH=$QWTDIR/lib:$LD_LIBRARY_PATH
|
||||
|
||||
|
||||
- The calibration wizards are based on the cern root software
|
||||
|
||||
Download the sources
|
||||
svn co https://root.cern.ch/svn/root/trunk root
|
||||
|
||||
To install:
|
||||
cd root
|
||||
./configure --enable-qt
|
||||
make
|
||||
make install
|
||||
|
||||
edit your .bashrc:
|
||||
export ROOTSYS=/usr/local/root
|
||||
export PATH=$ROOTSYS/bin:$PATH
|
||||
export LD_LIBRARY_PATH=$ROOTSYS/lib:$LD_LIBRARY_PATH
|
||||
|
||||
You can also download the binaries, assuming that your linuc and gcc versions match:
|
||||
http://root.cern.ch/drupal/content/production-version-534
|
||||
@ -1,522 +0,0 @@
|
||||
\documentclass{report}
|
||||
\usepackage{amssymb}
|
||||
\usepackage[dvips]{graphicx}
|
||||
\usepackage{verbatim}
|
||||
\begin{document}
|
||||
|
||||
\title{Mythen v3.0 manual}
|
||||
\date{\today}
|
||||
\maketitle
|
||||
|
||||
|
||||
\chapter{Installation and upgrades}
|
||||
|
||||
The new MYTHEN software is intended to control the MCS mythen boards either by using a command line interface (text client) or by using with a graphical user interface (GUI).
|
||||
|
||||
Here you can find in brief the main things you need to know in order to start working with your detector.
|
||||
|
||||
\section{The software package}
|
||||
|
||||
The actual software for the Mythen II system (MCS1 to MCS24) runs on 32~bit Scientific Linux machines (SLC5 tested, gcc 4.1.2 but it should not be critical).
|
||||
|
||||
The complete software package is composed of several programs which can be instaleld (or locally compiled) depending on the needs:
|
||||
\begin{itemize}
|
||||
\item The \textbf{slsDetector shared and static libraries} which are necessary for all user interfaces and can be simply used for implementig custom detector drivers;
|
||||
\item The \textbf{command line interface (slsDetectorClient) sls\_detector\_put, sls\_detector\_get, sls\_detector\_acquire} which is provided to communicate with the detectors;
|
||||
\item A \textbf{virtual server mythenServer} which can be used to simulate the behavior of the detector for what concerns the communication in case the detector is not online or is in use.
|
||||
\end{itemize}
|
||||
|
||||
|
||||
|
||||
\section{Requirements}
|
||||
|
||||
For installing the slsDetector shared and static libraries and the slsDetectorClient software, any Linux installation with a working gcc should be fine.\\
|
||||
|
||||
|
||||
\begin{comment}
|
||||
For installing the TSlsDetector shared and static libraries and the mythenGUI, working installations of Qt and Root should be present on the PC.\\
|
||||
|
||||
A Qt version equal or higher to 3.3 (but lower than Qt4) should be installed on the PC. It can be downloaded from \\
|
||||
\verb|http://www.trolltech.com/developer/downloads/qt/index| and the enviroment variable \verb|QTDIR| should be set to its path.
|
||||
Qt should be compiled with the options \verb|-thread -no-xft -qt-gif -no-exceptions| (check in \textsf{\$QTDIR/config.status}). this is normally the default on SLC machines.
|
||||
|
||||
|
||||
Also a \textsf{root} version higher than 5.15 but lower than 5.22 \textbf{with Qt support enabled} should be installed (the binaries can be downloaded from \verb|http://root.cern.ch| or compile with the option \verb|--enable-qt|) and the system variable \verb|ROOTSYS| should be set to its path. \\
|
||||
Remember to check the in file \$ROOTSYS/etc/system.rootrc or in your own custom .rootrc the following options are correctly defined:
|
||||
\begin{verbatim}
|
||||
# GUI specific settings
|
||||
Gui.Backend: qt
|
||||
Gui.Factory: qt
|
||||
\end{verbatim}
|
||||
Further details can be found in the root user's manual at \verb|http://root.cern.ch/root/doc/RootDoc.html| in chapter 1 (Introduction), 26 (ROOT/Qt integration interfaces) and 28 (Install and Build ROOT).\\
|
||||
|
||||
\verb|ROOTSYS|/bin and \verb|QTDIR|/bin should be added to the \verb|PATH|;\\
|
||||
\verb|ROOTSYS|/lib and \verb|QTDIR|/lib should be added to the \verb|LD_LIBRARY_PATH|~\footnote{In some linux installation there might be configuration scripts e.g in the directory \texttt{/etc/profile.d/} and \texttt{/etc/ld.so.conf.d/} overwriting this variables, so check that the installations correspond. If you have already used other Qt or Root versions, it might be that the old libraries are loaded in cache. To delete the chache, remove the file \texttt{/etc/ld.so.cache} and run \texttt{.....} this is always a problem!!!!}.\\
|
||||
|
||||
As an example, we suggest to add the following lines to your \verb|.bashrc| or \verb|.profile| file (changing \verb|QTDIR| and \verb|ROOTSYS| accordingly):
|
||||
\begin{verbatim}
|
||||
export ROOTSYS=/local/root
|
||||
export QTDIR=/local/qt
|
||||
|
||||
export PATH=$QTDIR/bin:$ROOTSYS/bin::$PATH
|
||||
export LD_LIBRARY_PATH=$QTDIR/lib:$ROOTSYS/lib:$LD_LIBRARY_PATH
|
||||
export MANPATH=$QTDIR/doc/man/usr/local/man:$MANPATH
|
||||
\end{verbatim}
|
||||
\end{comment}
|
||||
|
||||
\section{Compilation}
|
||||
If you simply want to install the software in the working directory you can:
|
||||
\begin{itemize}
|
||||
\item \verb=make lib= compile slsDetector library
|
||||
%\item \verb=make tlib= compile Root/Qt TSlsDetector library
|
||||
\item \verb=make slsDetectorClient= compile slsDetectorClient package
|
||||
%\item \verb=make mythenGUI= compile mythenGUI
|
||||
%\item \verb=make all= compile slsDetector and TSlsDetector libraries, the mythenClient package and the mythenGUI
|
||||
\item \verb=make all= compile slsDetector libraries, the slsDetectorClient package
|
||||
\item \verb=make clean= remove object files and executables
|
||||
\item \verb=make help= lists possible targets
|
||||
\end{itemize}
|
||||
|
||||
To be able to run the slsDetectorClient commands, add their location to your path.
|
||||
|
||||
|
||||
\section{Building}
|
||||
To install the software you should first configure some enviroment variables by executing:
|
||||
\begin{verbatim}
|
||||
> source configure
|
||||
\end{verbatim}
|
||||
(NOT \verb=>./configure= otherwise the enviroment variables will not be available for the \verb=make= command).
|
||||
This allows you to configure:
|
||||
\begin{itemize}
|
||||
%\item \textbf{QTDIR} i.e. the Qt installation directory. Ignore if you don't want to install the GUI, otherwise it should be defined in your \verb=.bashrc= and added to \verb=PATH= and \verb=LD_LIBRARY_PATH=
|
||||
%\item \textbf{ROOTSYS} i.e. the Root installation directory. Ignore if you don't want to install the GUI, otherwise it should be defined in your \verb=.bashrc= and added to \verb=PATH= and \verb=LD_LIBRARY_PATH=
|
||||
\item \textbf{INSTALLROOT} Directory where you want to install the software. Defaults to /usr/local/
|
||||
\item \textbf{BINDIR} Directory where you want to install the binaries. Defaults to bin/
|
||||
\item \textbf{INCDIR} Directory where you want to pute the header files. Defaults to include/slsdetector/
|
||||
\item \textbf{LIBDIR} Directory where you want to install the libraries. Defaults to lib/
|
||||
\item \textbf{DOCDIR} Directory where you want to copy the documentation. Defaults to share/doc/
|
||||
\end{itemize}
|
||||
|
||||
To build you can:
|
||||
\begin{itemize}
|
||||
\item \verb=make install_lib= install detector library and include files"
|
||||
%\item \verb=make install_tlib= install detector Root/Qt library and include files"
|
||||
\item \verb=make install_client= install slsDetectorClient
|
||||
%\item \verb=make install_gui= install mythenGUI
|
||||
%\item \verb=make install= install library, include files, mythenClient and mythenGUI"
|
||||
\item \verb=make install= install library, include files and mythenClient''
|
||||
\item \verb=make install_libdoc= install library documentation
|
||||
\item \verb=make install_clientdoc= install mythenClient documentation
|
||||
%\item \verb=make install_guidoc= install mythenGUI documentation
|
||||
\item \verb=make install_doc= install all documentation
|
||||
\item \verb=make help= lists possible targets
|
||||
\end{itemize}
|
||||
|
||||
\section{Detector upgrade}
|
||||
|
||||
The upgrade of the detector consists in both the upgrade of the communication software and of the firmware.\\
|
||||
|
||||
To upgrade the firmware you need either a working version of the Altera Quartus software or of the Quartus programmer, which can easly be downloade from \\
|
||||
\verb=https://www.altera.com/download/programming/quartus2/pq2-index.jsp= \\
|
||||
Normally installation of the software and of the driver for the USB-Blaster (provided together with the MYTHEN detector) are simpler under Windows.\\
|
||||
Under Windows, the first time that you connect the USB-Blasterto one of your USB ports, you will be asked to install new hardware. Set the path to search
|
||||
for the driver to: \verb=C:\altera\80sp1\qprogrammer\drivers\usb-blasterp= (where \verb=C:\altera\80sp1\qprogrammer\= is assumed to be ther path where your Quartus version is installed).\\
|
||||
\begin{enumerate}
|
||||
\item After starting the Quartus programmer, click on Hardware Setup and in the "Currently selected hardware" window select USB-Blaster.
|
||||
\item In the Mode combo box select "Active Serial Programming".
|
||||
\item Plug the end of your USB-Blaster WITH THE ADAPTER PROVIDED in the connector ASMI on the MCS board taking care that pin1 corresponds to the one indexed and with the rectangualr pad.
|
||||
\item Click on add file and from select the programming file provided when the upgrade has been reccomended.
|
||||
\item Check "Program/Configure" and "Verify".
|
||||
\item Push the start button and wait until the programming process is finished (progress bar top left).
|
||||
\item In case the programmer gives you error messages, check the polarity of your cable (pin1 corresponds) and that you have selected the correct programming connector.
|
||||
\end{enumerate}
|
||||
|
||||
To upgrade the software on the detector board transfer the provided software by ftp to the MCS:
|
||||
\begin{verbatim}
|
||||
ftp mymcs.mydomain.com
|
||||
username: root
|
||||
password: pass
|
||||
cd /mnt/flash/root
|
||||
put mythenDetectorServer
|
||||
quit
|
||||
\end{verbatim}
|
||||
If the /mnt/flash/root directory does not exist, create it before the transfer by telnetting to the MCS.\\
|
||||
After pressing reset on the board, the board should reboot.\\
|
||||
If the program does not correctly start either check by using the http interface that it is started by the inittab (check that the file \verb=/mnt/etc/inittab= ends with the line \verb=myid2:3:once:/mnt/flash/root/mythenDetectorServer= ). \\
|
||||
Otherwise make the program executable by telnetting to the MCS and executing:
|
||||
\verb=chmod a+xrw /mnt/flash/root/mythenDetectorServer=\\
|
||||
After pressing reset on the board, the board should reboot and the acqusition program correctly start.
|
||||
|
||||
\section{The trimbits and calibration files} \label{sec:trimdir}
|
||||
In order to be able to properly operate your detector you need a directory where the trimbit files (needed to set the detector settings and eventually equalize the individual channel thresholds) which in the following will be named \textit{trimdir} and a directory where the calibration files (needed to convert the threshold energy in DAC units) are stored which in the following will be named \textit{caldir}.
|
||||
\textit{trimdir} and \textit{caldir} can even be the same directory, and an example of it is given in the software package by the example directory \verb=trimbits=. \\
|
||||
Since these directories are customized by producing trimbit files and calibration for each detector, make sure not to overwrite yours every time you upgrade the software.
|
||||
|
||||
\textit{trimdir} should contain three subdirectories \verb=standard=, \verb=fast= and \verb=highgain= containing respectively the trimfiles \verb=standard.trim=, \verb=fast.trim= and \verb=highgain.trim= which contain the correct voltage settings for the detector although all the individual channel thresholds set to 0. The original files contained in the package should be used, infact in case of error the detector would not recognize the correct settings.\\
|
||||
The default trimbit files for each file will be stored in the directory according to the settings with the name \verb=noise.snxxx= where \verb=xxx= is the module serial number.\\
|
||||
|
||||
\textit{caldir} should contain three subdirectories \verb=standard=, \verb=fast= and \verb=highgain= containing respectively the trimfiles \verb=standard.cal=, \verb=fast.cal= and \verb=highgain.cal= which contain an average calibration of the modules for the diffrent settings. However this can different from the correct one for each individual module even of several kev and therefore it is very important to perform an energy calibration on a module basis (see section~\ref{sec:encal}).\\
|
||||
The default calibration files for each file will be stored in the directory according to the settings with the name \verb=calibration.snxxx= where \verb=xxx= is the module serial number.
|
||||
|
||||
|
||||
|
||||
\chapter{slsDetectorClient}
|
||||
|
||||
\section{Introduction}
|
||||
|
||||
This program is intended to control the MYTHEN detectors via command line interface.
|
||||
|
||||
To get all the possibilities of usage simply type:
|
||||
\begin{description}
|
||||
\item[sls\_detector\_acquire] to readout the detector at full speed
|
||||
\item[sls\_detector\_put] to set detector parameters
|
||||
\item[sls\_detector\_get] to retrieve detector parameters
|
||||
\end{description}
|
||||
|
||||
There are different ways for communicationg with your detector(s).
|
||||
\begin{itemize}
|
||||
\item[multiDetector] is represented by a group of controllers which operate symultaneously with the same parameters. You can define several multiDetector systems and int this case you address them using different indexes. In this case the syntax will be \verb=sls\_detector\_cmd i-= where cmd can be acquire, put, get and i is the index of the multiDetector entity (if omitted defaults to 0 - standard usage). Normally it is handy to use the multiDetector structure also in case of single detectors. However in some cases one cannot avoid using the slsDetector structure for detailed configuration (e.g. meaning of external signals or other flags)
|
||||
\item[slsDetector] is represented by a single controller. You can define several multiDetector systems and int this case you address them using different indexes. In this case the syntax will be \verb=sls\_detector\_cmd i:= where cmd can be acquire, put, get and i is the index of the slsDetector entity, which cannot be omitted. When creating the multiDetector structure, the indexes are automatically assigned to the detectors contained in it. You can retrieve the indexes relative to the slsDetector using: \verb=sls\_detector\_get hostname:pos, sls\_detector\_get id:pos= whic will return the hostname in position pos of your multiDetector structure (pos=0 in case of single detectors) and its index.
|
||||
\end{itemize}
|
||||
|
||||
|
||||
\section{Acquisition}
|
||||
mythen\_acquire [id[-/:]]
|
||||
|
||||
the detector is started and the data are acquired, postprocessed and written to file according to the configuration
|
||||
|
||||
|
||||
\section{Detector setup}
|
||||
|
||||
mythen\_put [id[:/-]]var arg
|
||||
|
||||
is used to configure the detector parameter var
|
||||
e.g. mythen\_put 0:exptime 1 sets the exposure time to 1 s
|
||||
|
||||
\begin{description}
|
||||
\item[help i] get help
|
||||
\item[config fname] reads the configuration file specified and sets the values
|
||||
\item[parameters fname] sets the detector parameters specified in the file
|
||||
\item[setup rootname] reads the files specfied (and that could be created by get setup) and resets the complete detector configuration including flatfield corrections, badchannels, trimbits etc.
|
||||
\item[hostname name] this is mandatory!!!! sets hostname (or IP adress)
|
||||
\item[online b] b can be 0 or 1 and sets the detector in offline/online state. Must be used to restore communication if some socket called failed because the detector was not connected.
|
||||
\item[status s] either start or stop
|
||||
\item[caldir path] Sets path of the calibration files
|
||||
\item[trimdir path] Sets path of the trim files
|
||||
\item[outdir path] directory to which the files will be written by default
|
||||
\item[fname name] filename to which the files will be written by default (to which file and position indexes will eventually be attached)
|
||||
\item[index i] start index of the files (automatically incremented by the acquisition functions)
|
||||
\item[nmod n] Sets number of detector modules
|
||||
\item[extsig:i mode] Sets usage of the external digital signal i. mode can be: off, gate\_in\_active\_high, gate\_in\_active\_low, trigger\_in\_rising\_edge, trigger\_in\_falling\_edge, ro\_trigger\_in\_rising\_edge, ro\_trigger\_in\_falling\_edge, gate\_out\_active\_high, gate\_out\_active\_low, trigger\_out\_rising\_edge, trigger\_out\_falling\_edge, ro\_trigger\_out\_rising\_edge, ro\_trigger\_out\_falling\_edge
|
||||
\item[timing] Sets the timing mode of the detector. Can be auto, gating (works only if at least one of the signals is configured as gate\_in), trigger (works only if at least one of the signals is configured as trigger\_in), ro\_trigger (works only if at least one of the signals is configured as ro\_trigger\_in), triggered\_gating (works only if one ofthe signals is configured as gate\_in and one as trigger\_in).
|
||||
\item[settings sett] Sets detector settings. Can be: standard fast highgain (depending on trheshold energy and maximum count rate: please refere to manual for limit values!);
|
||||
\item[threshold ev] Sets detector threshold in eV. Should be half of the beam energy. It is precise only if the detector is calibrated
|
||||
\item[vthreshold dac] Sets detector threshold in DAC units. A very rough calibration is dac=800-10*keV
|
||||
\item[exptime t] Sets the exposure time per frame (in s)
|
||||
\item[period t] Sets the frames period (in s)
|
||||
\item[delay t] Sets the delay after trigger (in s)
|
||||
\item[gates n] Sets the number of gates per frame
|
||||
\item[frames n] Sets the number of frames per cycle (e.g. after each trigger)
|
||||
\item[triggers n] Sets the number of triggers (e.g. number of triggers)
|
||||
\item[probes n] Sets the number of probes to accumulate (max 3)
|
||||
\item[dr n] Sets the dynamic range - can be (1,) 4, 8,16 or 24 bits
|
||||
\item[flags mode] Sets the readout flags - can be none or storeinram
|
||||
\item[flatfield fname] Sets the flatfield file name - none disable flat field corrections
|
||||
\item[ratecorr t] Sets the rate corrections with dead time t ns (0 unsets, -1 uses default dead time for chosen settings
|
||||
\item[badchannels fname] Sets the badchannels file name - none disable bad channels corrections
|
||||
\item[angconv fname] Sets the angular conversion file name
|
||||
\item[globaloff o] sets the fixed angular offset of your encoder - should be almost constant!
|
||||
\item[fineoff o] sets a possible angular offset of your setup - should be small but can be senseful to modify
|
||||
\item[binsize s] sets the binning size of the angular conversion (otherwise defaults from the angualr conversion constants)
|
||||
\item[angdir i] sets the angular direction of the detector (i can be 1 or -1 - by default 1, channel 0 is smaller angle)
|
||||
\item[positions np (pos0 pos1...posnp)] Sets the number of positions at which the detector is moved during the acquisition and their values
|
||||
\item[startscript script] sets a script to be executed at the beginning of the measurements (e.g. open shutter). \textit{none} unsets. Parameters will be parsed as \verb|script nrun=i par=spar| where i is the run number and spar is the value of startscriptpar.
|
||||
\item[stopscript script] sets a script to be executed at the end of the measurement (e.g. close shutter). \textit{none} unsets. Parameters will be parsed as \verb|script nrun=i par=spar| where i is the run number and spar is the value of stopscriptpar.
|
||||
\item[startscriptpar spar] sets a parameter passed to the start script as string with the syntax par=spar. Its meaning must be interpreted inside the script!
|
||||
\item[stopscriptpar spar] sets a parameter passed to the start script as string with the syntax par=spar. Its meaning must be interpreted inside the script!
|
||||
\item[scan0script script] Sets a scan script to be executed at higher level. Script can be none (unset), threshold (change threshold DAC values for all modules), energy (change energy threshold DAC values using calibration for each module), trimbits (change trimbits for all channels) or any script (e.g changing temperature or moving sample) which will be called with the syntax \verb| script nrun=i fn=fname var=val par=spar| where i is the file index, fname is the file name val is the current value of the scan variable and spar is the value of the scan parameter
|
||||
\item[scan1script script] Sets a scan script to be executed at lower level. Script can be none (unset), threshold (change threshold DAC values for all modules), energy (change energy threshold DAC values using calibration for each module), trimbits (change trimbits for all channels) or any script (e.g changing temperature or moving sample) which will be called with the syntax \verb| script nrun=i fn=fname var=val par=spar| where i is the file index, fname is the file name val is the current value of the scan variable and spar is the value of the scan parameter
|
||||
\item[scan0par spar] sets the scan parameter to be passed to scan0script as a string with syntax par=spar. Its meaning has to be interpreted insode the script!
|
||||
\item[scan1par spar] sets the scan parameter to be passed to scan1script as a string with syntax par=spar. Its meaning has to be interpreted insode the script!
|
||||
\item[scan0prec i] sets the precision of the scan variable in order to properly generate the file names for scan0
|
||||
\item[scan1prec i] sets the precision of the scan variable in order to properly generate the file names for scan1
|
||||
\item[scan0steps n (f0 f1..fn)] sets the steps for the scan0script. n is the number of steps and the following values are the step values.
|
||||
\item[scan1steps n (f0 f1..fn)] sets the steps for the scan1script. n is the number of steps and the following values are the step values.
|
||||
\item[scan0range mi ma st] generates the steps for the scan0script in the range mi to ma with step st (is mi smaller than ma specify a negative step)
|
||||
\item[scan1range mi ma st] generates the steps for the scan1script in the range mi to ma with step st (is mi smaller than ma specify a negative step)
|
||||
\item[scriptbefore script] sets the script to be executed before each acquisition (before all positions) with the syntax \verb|script nrun=i fn=fname par=spar sv0=svar0 sv1=svar1 p0=spar0 p1=spar1| where i is the file index, fname is the file name, sva0, svar1 are the current values of the scan variables 0 and 1, spar0, spar1 are tthe scan parameter 0 and 1. \textit{none} unsets.
|
||||
\item[scriptafter script] sets the script to be executed after each acquisition (after all positions) with the syntax \verb|script nrun=i fn=fname par=spar sv0=svar0 sv1=svar1 p0=spar0 p1=spar1| where i is the file index, fname is the file name, sva0, svar1 are the current values of the scan variables 0 and 1, spar0, spar1 are tthe scan parameter 0 and 1. \textit{none} unsets.
|
||||
\item[scriptbeforepar spar] sets the parameter to be passed to the script before witht he syntax par=spar
|
||||
\item[scriptafterpar spar] sets the parameter to be passed to the script after witht he syntax par=spar
|
||||
\item[headerbefore script] sets the script to be executed before each acquisition (after moving the detector) with the syntax \verb|script nrun=i fn=fname par=spar| where i is the run number, fname is the file name, spar is the header before parameter. The script is normally used to save a file header. \textit{none} unsets.
|
||||
\item[headerafter script] sets the script to be executed after each acquisition (after each position) with the syntax \verb|script nrun=i fn=fname par=spar| where i is the run number, fname is the file name, spar is the header after parameter. The script is normally used to complete the file header. \textit{none} unsets.
|
||||
\item[headerbeforepar spar] sets the parameter to be passed to the header before script with the syntax par=spar
|
||||
\item[headerafterpar spar] sets the parameter to be passed to the header after script with the syntax par=spar
|
||||
\end{description}
|
||||
|
||||
|
||||
|
||||
|
||||
\section{Retrieving detector parameters (plus trimming and test modalities)}
|
||||
mythen\_get [id[:/-]]var arg
|
||||
|
||||
is used to retrieve the detector parameter var
|
||||
e.g. mythen\_get 0:exptime returns the exposure time in seconds
|
||||
|
||||
|
||||
|
||||
\begin{description}
|
||||
\item[help] This help
|
||||
\item[config fname] writes the configuration file
|
||||
\item[parameters fname] writes the main detector parameters for the measuremen tin the file
|
||||
\item[setup rootname] writes the complete detector setup (including configuration, trimbits, flat field coefficients, badchannels etc.) is a set of files for which the extension is automatically generated
|
||||
\item[online] return whether the detector is in online (1) or offline (0) state.
|
||||
\item[status] gets the detector status - can be: running, error, transmitting, finished, waiting or idle
|
||||
\item[data] gets all data from the detector (if any) processes them and writes them to file according to the preferences already setup
|
||||
\item[frame] gets a single frame from the detector (if any) processes it and writes it to file according to the preferences already setup
|
||||
\item[hostname] Gets the detector hostname (or IP address)
|
||||
\item[caldir] Gets path of the calibration files
|
||||
\item[trimdir] Gets path of the trim files
|
||||
\item[outdir] directory to which the files will be written by default
|
||||
\item[fname] filename to which the files will be written by default (to which file and position indexes will eventually be attached)
|
||||
\item[index] start index of the files (automatically incremented by the acquisition functions)
|
||||
\item[nmod] Gets number of detector modules
|
||||
\item[maxmod] Gets maximum number of detector modules
|
||||
\item[extsig:i] Gets usage of the external digital signal i. The return value can be: off, gate\_in\_active\_high, gate\_in\_active\_low, trigger\_in\_rising\_edge, trigger\_in\_falling\_edge, ro\_trigger\_in\_rising\_edge, ro\_trigger\_in\_falling\_edge, gate\_out\_active\_high, gate\_out\_active\_low, trigger\_out\_rising\_edge, trigger\_out\_falling\_edge, ro\_trigger\_out\_rising\_edge, ro\_trigger\_out\_falling\_edge\item[timing] Sets the timing mode of the detector. Can be auto, gating (works only if at least one of the signals is configured as gate\_in), trigger (works only if at least one of the signals is configured as trigger\_in), ro\_trigger (works only if at least one of the signals is configured as ro\_trigger\_in), triggered\_gating (works only if one ofthe signals is configured as gate\_in and one as trigger\_in).
|
||||
\item[modulenumber] Gets the module serial number
|
||||
\item[moduleversion] Gets the module version
|
||||
\item[detectornumber] Gets the detector number (MAC address)
|
||||
\item[detectorversion] Gets the detector firmware version
|
||||
\item[softwareversion] Gets the detector software version
|
||||
\item[digitest:i] Makes a digital test of the detector module i. Returns 0 if it succeeds
|
||||
\item[bustest] Makes a test of the detector bus. Returns 0 if it succeeds
|
||||
\item[settings] Gets detector settings. Can be: standard fast highgain undefined
|
||||
\item[threshold] Gets detector threshold in eV. It is precise only if the detector is calibrated
|
||||
\item[vthreshold] Gets detector threshold in DAC units. A very rough calibration is dac=800-10*keV
|
||||
\item[exptime] Gets the exposure time per frame (in s)
|
||||
\item[period] Gets the frames period (in s)
|
||||
\item[delay] Gets the delay after trigger (in s)
|
||||
\item[gates] Gets the number of gates per frame
|
||||
\item[frames] Gets the number of frames per cycle (e.g. after each trigger)
|
||||
\item[triggers] Gets the number of triggers (e.g. number of triggers)
|
||||
\item[probes] Gets the number of probes to accumulate (max 3)
|
||||
\item[timestamp] Gets the internal time stamp of the nex frame acquired (i.e. during an acquisition, all timestamps of the frames are stored in a FIFO which can be read after the acquisition - returns -1 if the FIFO is empty)
|
||||
\item[dr] Gets the dynamic range
|
||||
\item[trim:mode fname] Trims the detector and writes the trimfile fname.snxxx. mode can be: noise beam improve fix offline - Check that the start conditions are OK!!!
|
||||
\item[flatfield] fname returns whether the flat field corrections are enabled and if so writes the coefficients to the specified filename. If fname is none it is not written
|
||||
\item[ratecorr] returns wether the rate corrections are enabled and what is the dead time used in ns
|
||||
\item[badchannels fname] returns wether the bad channels corrections are enabled and if so writes the bad channels to the specified filename. If fname is none it is not written
|
||||
\item[angconv fname] returns wether the angular conversion is enabled and if so writes the angular conversion coefficients to the specified filename. If fname is none, it is not written
|
||||
\item[globaloff] returns the fixed angular offset of your encoder - should be almost constant!
|
||||
\item[fineoff] returns a possible angualr offset of your setup - should be small but can be senseful to modify
|
||||
\item[binsize] returns the binning size of the angular conversion
|
||||
\item[angdir] gets the angular direction of the detector (can be 1 or -1 - by default 1, channel 0 is smaller angle)
|
||||
\item[positions] returns the number of positions at which the detector is moved during the acquisition and their values
|
||||
\item[startscript script] sets a script to be executed at the beginning of the measurements (e.g. open shutter). \textit{none} unsets. Parameters will be parsed as \verb|script nrun=i par=spar| where i is the run number and spar is the value of startscriptpar.
|
||||
\item[stopscript] returns the script to be executed at the end of the measurement (e.g. close shutter). \textit{none} unsets. Parameters will be parsed as \verb|script nrun=i par=spar| where i is the run number and spar is the value of stopscriptpar.
|
||||
\item[startscriptpar] returns the parameter passed to the start script as string with the syntax par=spar. Its meaning must be interpreted inside the script!
|
||||
\item[stopscriptpar]returns the parameter passed to the start script as string with the syntax par=spar. Its meaning must be interpreted inside the script!
|
||||
\item[scan0script] returns the scan script to be executed at higher level. Script can be none (unset), threshold (change threshold DAC values for all modules), energy (change energy threshold DAC values using calibration for each module), trimbits (change trimbits for all channels) or any script (e.g changing temperature or moving sample) which will be called with the syntax \verb| script nrun=i fn=fname var=val par=spar| where i is the file index, fname is the file name val is the current value of the scan variable and spar is the value of the scan parameter
|
||||
\item[scan1script] returns the scan script to be executed at lower level. Script can be none (unset), threshold (change threshold DAC values for all modules), energy (change energy threshold DAC values using calibration for each module), trimbits (change trimbits for all channels) or any script (e.g changing temperature or moving sample) which will be called with the syntax \verb| script nrun=i fn=fname var=val par=spar| where i is the file index, fname is the file name val is the current value of the scan variable and spar is the value of the scan parameter
|
||||
\item[scan0par] returns the scan parameter to be passed to scan0script as a string with syntax par=spar. Its meaning has to be interpreted insode the script!
|
||||
\item[scan1par] returns the scan parameter to be passed to scan1script as a string with syntax par=spar. Its meaning has to be interpreted insode the script!
|
||||
\item[scan0prec] returns the precision of the scan variable in order to properly generate the file names for scan0
|
||||
\item[scan1prec] returns the precision of the scan variable in order to properly generate the file names for scan1
|
||||
\item[scan0steps] returns the steps for the scan0script. n is the number of steps and the following values are the step values.
|
||||
\item[scan1steps] returns the steps for the scan1script. n is the number of steps and the following values are the step values.
|
||||
\item[scan0range] returns the steps for the scan0script. n is the number of steps and the following values are the step values.
|
||||
\item[scan1range] returns the steps for the scan1script. n is the number of steps and the following values are the step values.
|
||||
\item[scriptbefore] returns the script to be executed before each acquisition (before all positions) with the syntax \verb|script nrun=i fn=fname par=spar sv0=svar0 sv1=svar1 p0=spar0 p1=spar1| where i is the file index, fname is the file name, sva0, svar1 are the current values of the scan variables 0 and 1, spar0, spar1 are tthe scan parameter 0 and 1.
|
||||
\item[scriptafter] returns the script to be executed after each acquisition (after all positions) with the syntax \verb|script nrun=i fn=fname par=spar sv0=svar0 sv1=svar1 p0=spar0 p1=spar1| where i is the file index, fname is the file name, sva0, svar1 are the current values of the scan variables 0 and 1, spar0, spar1 are tthe scan parameter 0 and 1.
|
||||
\item[scriptbeforepar] returns the parameter to be passed to the script before witht he syntax par=spar
|
||||
\item[scriptafterpar] returns the parameter to be passed to the script after witht he syntax par=spar
|
||||
\item[headerbefore] returns the script to be executed before each acquisition (after moving the detector) with the syntax \verb|script nrun=i fn=fname par=spar| where i is the run number, fname is the file name, spar is the header before parameter. The script is normally used to save a file header.
|
||||
\item[headerafter] returns the script to be executed after each acquisition (after each position) with the syntax \verb|script nrun=i fn=fname par=spar| where i is the run number, fname is the file name, spar is the header after parameter. The script is normally used to complete the file header.
|
||||
\item[headerbeforepar] returns the parameter to be passed to the header before script with the syntax par=spar
|
||||
\item[headerafterpar]returns the parameter to be passed to the header after script with the syntax par=spar
|
||||
\end{description}
|
||||
|
||||
\section{Tips}
|
||||
|
||||
\subsubsection{Mandatory setup}
|
||||
First of all you should setup the hostname and the detector size and dynamic range:
|
||||
\begin{verbatim}
|
||||
mythen_put hostname mcs1x00
|
||||
mythen_get nmod
|
||||
mythen_get dr
|
||||
\end{verbatim}
|
||||
You should also tell the program where to find the default trimbits files and calibration files:
|
||||
\begin{verbatim}
|
||||
mythen_put trimdir /scratch/trimbits
|
||||
mythen_get caldir /scratch/calibration
|
||||
\end{verbatim}
|
||||
To chose the detector settings (e.g. standard):
|
||||
\begin{verbatim}
|
||||
mythen_put settings standard
|
||||
\end{verbatim}
|
||||
In case \verb=mythen_get settings= does not answer correctly, it most probably means that there is a problem in the architecture or setting of \textit{trimdir} and \textit{caldir} (see section~\ref{sec:trimdir}).
|
||||
|
||||
\subsubsection{Acquisition setup}
|
||||
You need to setup where the files will be written to
|
||||
\begin{verbatim}
|
||||
mythen_put outdir /scratch
|
||||
mythen_put fname run
|
||||
mythen_put index 0
|
||||
\end{verbatim}
|
||||
this way your files will al be named /scracth/run\_i.dat where is starts from 0 and is automatically incremented.
|
||||
|
||||
You will then need to setup the detector threshold and settings, the exposure time, the number of real time frames and eventually how many real time frames should be acquired:
|
||||
\begin{verbatim}
|
||||
mythen_put settings standard
|
||||
mythen_put threshold 6000
|
||||
mythen_put exptime 1.
|
||||
mythen_put frames 10
|
||||
\end{verbatim}
|
||||
In this case 10 consecutive 1s frames will be acquired.
|
||||
External gating and triggering or more advanced acquisition modes are not explained here.
|
||||
|
||||
\subsubsection{Acquiring}
|
||||
There are two ways of acquiring data.\\
|
||||
The first is fully automatic and freezes the terminal until the acquisition is finished:
|
||||
\begin{verbatim}
|
||||
mythen_acquire 0
|
||||
\end{verbatim}
|
||||
This is particulary indicated for fast real time acquisitions.
|
||||
|
||||
If you want to acquire few long frames you can run:
|
||||
\begin{verbatim}
|
||||
mythen_put status start
|
||||
\end{verbatim}
|
||||
and the poll the detector status using
|
||||
\begin{verbatim}
|
||||
mythen_get status
|
||||
\end{verbatim}
|
||||
if the answer is either transmitting or finished, the data are ready to be downloaded from the detector.
|
||||
This can be done using either:
|
||||
\begin{verbatim}
|
||||
mythen_get frame
|
||||
\end{verbatim}
|
||||
where a single data frame is downloaded or
|
||||
\begin{verbatim}
|
||||
mythen_get data
|
||||
\end{verbatim}
|
||||
where all data present on the detector are downloaded.
|
||||
This is not indicated when many short real time frames should be acquired since the detector memory would be full before finishing the acquisition since the download time is so limited.
|
||||
|
||||
\subsubsection{Data processing}
|
||||
Flat field and rate corrections can be applied direcly by simply selecting:
|
||||
\begin{verbatim}
|
||||
mythen_put flatield myflatfield.raw
|
||||
mythen_put ratecorr -1
|
||||
\end{verbatim}
|
||||
|
||||
Concerning the angular conversion, it is very reccomended that the users edit the file usersFunctions.cpp contained in the folder slsDetectorSoftware/usersFunctions.
|
||||
In the file it is possible to modify the function used for calculating the angular conversion and the ones used for interfacing with the diffractometer equipment i.e. reading the encoder fo the detector position, the ionization chanmbers etc.
|
||||
|
||||
It is also possible to configure some scans/scripts to be executed during the acquisition. They will be normally called as system calls except for threshold, energy and trimbits scans.
|
||||
|
||||
|
||||
|
||||
\begin{comment}
|
||||
|
||||
\chapter{mythenGUI}
|
||||
|
||||
\section{Introduction}
|
||||
|
||||
To run the GUI just call:
|
||||
\begin{verbatim}
|
||||
bin/mythenGUI
|
||||
\end{verbatim}
|
||||
Possible arguments are:
|
||||
\begin{description}
|
||||
\item[help] This help
|
||||
\item[-f myconf.txt] loads the configuration file to myconf.txt
|
||||
\item[-id i] Sets the detector to id i (the default is i). Useful when more than one detector are operated in parallel.
|
||||
\item[-offline] works in offline mode i.e. not connecting to the detector. Usefule e.g. to perform the energy calibration of the detector and possibly in the future to reprocess and visualize the data (not yet implemented).
|
||||
\item[-size n] sets the size of the text to n (the default is n=10);
|
||||
\item[-scale s] scales the size of the text and the root canvas by the scaling factor s (the default is s=1). It is useful when executing the program on a PC with low screen resolution (e.g. a laptop) and the window would then fall out of the screen.");
|
||||
\end{description}
|
||||
The configuration of the detector can either be set when startin the GUI using the configuration file or using the text client or even using the configuration tab of the GUI.
|
||||
|
||||
|
||||
\section{Acquisition}
|
||||
By pressing the start button in the measurement tab the data will be acquired, saved, corrected and plotted as specified.
|
||||
|
||||
The stop button stops the acquisition i.e. if there are data left to be saved processed etc. the program will not really stop until the offline processes are done.
|
||||
|
||||
Please don't be too nervous clicking on start and/or stop since this is one of the main causes of crashes (the program has been teste only for quiet users :-)).
|
||||
|
||||
\section{Other functions}
|
||||
The text client and the GUI can be operated in parallel (althoug you should not change parameters or acquire data at the same data from the gui and the text client!) and the values displayed by the GUI should normally be the actual ones.
|
||||
However this kind of parallel operation is at your own risk!
|
||||
|
||||
|
||||
The main parameters are group in tabs according to their meaning. To enable some tabs you should enter the modes menu and select Advanced/configuration/Debug
|
||||
Here is the general subject of the tabs:
|
||||
\begin{description}
|
||||
\item[Measurement] Main acquisition parameters that you may want to change often
|
||||
\item[Data Output] Where to write the data, in which format and what to to with them
|
||||
\item[Plot] What to plot and how (only partially implemented)
|
||||
\item[Actions] Allows to configure scans and/or execute scripts at teh beginning or at the end of the measurement.
|
||||
\item[Time resolved] Parameters for time resolved (real time) measurements
|
||||
\item[Advanced] Must be activated with the modes menu button. Allows to set some advanced configuration which you don't want general users to change (e.g. data size, external signals, advanced acquisition speed)
|
||||
\item[Trimming] Must be activated with the modes menu button. Allows to trim the detector and/or load specific trim files.
|
||||
\item[Configuration] Must be activated with the modes menu button. Allows to configure the detector
|
||||
\item[Debugging] Must be activated with the modes menu button. Allows to test the detectors functionality, acquire serial numbers etc.
|
||||
\end{description}
|
||||
Most of the parameters are explained through a tooltip which appers if you leave the mouse on the widget for a few seconds.
|
||||
|
||||
The configuration and/or the complete setup of the detector can be loaded and saved using the Utilities menu.
|
||||
|
||||
|
||||
|
||||
\subsection{Mandatory configuration}
|
||||
Where to find some important parameters (should be set only once, then it should remain in memory):
|
||||
\begin{description}
|
||||
\item[Hostname] Configuration tab. Press enter to update.
|
||||
\item[Trim dir] Configuration tab. Press enter to update.
|
||||
\item[Cal dir] Configuration tab. Press enter to update.
|
||||
\item[Number of modules] Configuration tab or Advanced tab
|
||||
\item[Dynamic range] Advanced tab
|
||||
\item[Output directory] Data Output tab.
|
||||
\item[File name] Measurement tab.
|
||||
\item[File index] Measurement tab (automatically incremented).
|
||||
\end{description}
|
||||
|
||||
|
||||
\subsection{Acquisition setup}
|
||||
Where to find some important parameters (should be set only once, then it should remain in memory):
|
||||
\begin{description}
|
||||
\item[Settings] Measurement tab
|
||||
\item[Threshold] Measurement tab
|
||||
\item[Exposure time] Measurement tab
|
||||
\item[Number of frames] Measurement tab for non time-resolved measurement, Time resolved tab for fast real time measurements. if you need some action between frame see Actions tab.
|
||||
\end{description}
|
||||
|
||||
\chapter{Energy calibration} \label{sec:encal}
|
||||
The energy calibration should be performed by illuminating the detector with monochromatic radiation at at least 2 (better 3-4) energies larger than 8~keV. The energy calibration should be performed after trimming and the trim files used should be properly copied in the trimbits directory and used as default.
|
||||
|
||||
The data can be acquired either with the mythenGUI (by using the calibration wizard or the threshold scan utility in the Action tab) or with the slsDetectorClient (by scanning the threshold using mythen\_put 0:vthreshold), but since the analysis needs the use of root, the GUI must be used to finalize the calibration.
|
||||
|
||||
In the mythenGUI menu Utilities/Calibration wizard it is possible to simply and automatically perform the energy calibration of the detector:
|
||||
\begin{enumerate}
|
||||
\item
|
||||
Check the ``Detector online'' box in case you want to acquire the data, otherwise simply unclick it and you will be required to provide already acquired data and the details about the detector.\\
|
||||
The first time, chose ``Start new calibration'' and chose the directory where you want to store the data you want to acquire. The calibration file names have a''.root'' extension. \\
|
||||
The calibration should be perormed by acquiring always the same settings and with the same number of modules always connected in the same sequence. The clibration files, however, can be used for the modules also on different systems (i.e. different number of modules, readout board, etc.). A new calibration should be performed for different detector settings.
|
||||
\item If the detector is online, the settings, the number of modules and their serial number will automatically be retrieved. If you selected the offline mode, you must provide the detector settings for the calibration that you want to perform and the serial numbers of the modules in the correct order (to do so, enter the 3 hexadecimal digits in the right sequence and press enter for each module - in case of error the list is editable).
|
||||
\item Enter the energy of your beam (in keV!); \\
|
||||
If you are in online mode, the acquisition time should be chosen such that there are at least 1000 counts per channel at an intemediate threshold; the range of the threshold scan should be between approx 800-15*keV and 800, better with a step of 1 but up to 5 can be fine in order to reduce the acquisition time: it is more important that each step has a sufficient statistics than that the threshold step is low! After pressing ``Next'', the detector starts acquiring and showing the histogram of the calibration. When it is finished simply press ``Finish'' to accept the data, ``Cancel'' to reject them.\\
|
||||
In offline mode, you are required to enter the range and step of the calibration and to select the files (in the same sequence as the threshold values!). After pressing ``Next'' (enabled only if the number of steps is the same as the number of files), the histogram showing the threshold scan is drawn. Simply press ``Finish'' to accept the data, ``Cancel'' to reject them.
|
||||
\item For the following calibration steps, check the ``Detector online'' box in case you want to acquire the data, otherwise simply unclick it and you will be required to provide already acquired data and the details about the detector.\\ Chose ``Add calibration step'' and select the file created prevously. The settings, number of modules and serial numbers of the modules and the energies at which the acquisition has been already performed should be displayed.
|
||||
\item Add a new calibration step like in point 3. and iterate for all the energies at which you want to perform the calibration.
|
||||
\item To generate the calibration files, chose ``Generate calibration files'' and select the file created prevously. The settings, number of modules and serial numbers of the modules and the energies at which the acquisition has been already performed should be displayed.
|
||||
\item Chose the directory and the root of the calibrations files name. An extension corresponding to the serial number of the modules will be generated.
|
||||
\item The calibration files for each module should be generated. For each energy you can set the start parameters of the fit and the fitting range (press enter after each change) so that the fitted curves nicely fit the data. The linear fit between energies and inflection points can also be checked.
|
||||
\end{enumerate}
|
||||
|
||||
\end{comment}
|
||||
|
||||
|
||||
\end{document}
|
||||
|
||||
Loading…
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Reference in New Issue
Block a user