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removed hdf5 c, only c++

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This commit is contained in:
Dhanya Maliakal 2016-12-14 18:19:29 +01:00
parent f8b34a16dd
commit cdcb413241
2 changed files with 2 additions and 141 deletions
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10
slsReceiverSoftware/include/UDPStandardImplementation.h
View File

@ -27,10 +27,9 @@
#ifdef HDF5C
#include "H5Cpp.h"
//#ifndef H5_NO_NAMESPACE
#ifndef H5_NO_NAMESPACE
using namespace H5;
//#endif
//#include "hdf5.h"
#endif
#endif
/**
@ -647,11 +646,6 @@ private:
DataSet *hdf5_datasetId[MAX_NUMBER_OF_WRITER_THREADS];
H5File *hdf5_fileId[MAX_NUMBER_OF_WRITER_THREADS];
hid_t hdf5_datatype;
/*hid_t hdf5fileId[MAX_NUMBER_OF_WRITER_THREADS];
hid_t hdf5DatasetId[MAX_NUMBER_OF_WRITER_THREADS];
hid_t hdf5DataspaceId[MAX_NUMBER_OF_WRITER_THREADS];
hid_t hdf5DataType;*/
#endif
//***acquisition indices/count parameters***
/** Frame Number of First Frame of an entire Acquisition (including all scans) */

133
slsReceiverSoftware/src/UDPStandardImplementation.cpp
View File

@ -1009,19 +1009,6 @@ int UDPStandardImplementation::startReceiver(char *c){
pthread_mutex_unlock(&writeMutex);
return FAIL;
}
/*
if(hdf5DataspaceId[i]){
H5Sclose(hdf5DataspaceId[i]);
hdf5DataspaceId[i] = 0;
}
if(hdf5DatasetId[i]){
H5Dclose(hdf5DatasetId[i]);
hdf5DatasetId[i] = 0;
}
if(hdf5fileId[i]){
H5Fclose(hdf5fileId[i]);
hdf5fileId[i] = 0;
}*/
pthread_mutex_unlock(&writeMutex);
#endif
//reset gui variables
@ -1259,7 +1246,6 @@ void UDPStandardImplementation::closeFile(int ithread){
}
#ifdef HDF5C
pthread_mutex_lock(&writeMutex);
try{
Exception::dontPrint(); //to handle errors
if(hdf5_dataspaceId[ithread]) {delete hdf5_dataspaceId[ithread]; hdf5_dataspaceId[ithread] = 0;}
@ -1270,20 +1256,6 @@ void UDPStandardImplementation::closeFile(int ithread){
cprintf(RED,"Error in closing HDF5 handles\n");
error.printError();
}
/*
if(hdf5DataspaceId[ithread]){
H5Sclose(hdf5DataspaceId[ithread]);
hdf5DataspaceId[ithread] = 0;
}
if(hdf5DatasetId[ithread]){
H5Dclose(hdf5DatasetId[ithread]);
hdf5DatasetId[ithread] = 0;
}
if(hdf5fileId[ithread]){
H5Fclose(hdf5fileId[ithread]);
hdf5fileId[ithread] = 0;
}
*/
pthread_mutex_unlock(&writeMutex);
#endif
}
@ -1781,90 +1753,6 @@ int UDPStandardImplementation::createNewFile(int ithread){
}//end of creating file
pthread_mutex_unlock(&writeMutex);
/*
if(hdf5DataspaceId[ithread]){
H5Sclose(hdf5DataspaceId[ithread]);
hdf5DataspaceId[ithread] = 0;
}
if(hdf5DatasetId[ithread]){
H5Dclose(hdf5DatasetId[ithread]);
hdf5DatasetId[ithread] = 0;
}
if(hdf5fileId[ithread]){
// update attributes
bool error = true;
hsize_t dims = 1;
hid_t hdf5AttributeDataspaceId = H5Screate_simple (1, &dims, NULL);
if(hdf5AttributeDataspaceId>=0){
hid_t hdf5AttributeId = H5Acreate2(hdf5fileId[ithread],"Dynamic Range",H5T_STD_I32LE,hdf5AttributeDataspaceId,
H5P_DEFAULT, H5P_DEFAULT);
if(hdf5AttributeId>=0){
if(H5Awrite(hdf5AttributeId,H5T_STD_I32LE,&dynamicRange)>=0){
if(H5Aclose(hdf5AttributeId)>=0){
error = false;
}
}
}
}
if(error){
FILE_LOG(logERROR) << "Could not create attribute for " << completeFileName[ithread] << endl;
pthread_mutex_unlock(&writeMutex);
return FAIL;
}
H5Fclose(hdf5fileId[ithread]);
hdf5fileId[ithread] = 0;
}
//create file
if(!overwriteEnable){
hdf5fileId[ithread] = H5Fcreate(completeFileName[ithread], H5F_ACC_EXCL, H5P_DEFAULT, H5P_DEFAULT);
if(hdf5fileId[ithread]<0){
FILE_LOG(logERROR) << "Could not create new file" << completeFileName[ithread] << ". Check if it exists or permissions" << endl;
pthread_mutex_unlock(&writeMutex);
return FAIL;
}
}else{
hdf5fileId[ithread] = H5Fcreate(completeFileName[ithread], H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
if(hdf5fileId[ithread]<0){
FILE_LOG(logERROR) << "Could not create/overwrite new file" << completeFileName[ithread] << ". Check permissions" << endl;
pthread_mutex_unlock(&writeMutex);
return FAIL;
}
}
//create dataspace and dataset
hsize_t srcdims[3] = {NY,NX,numberOfFrames};
if(dynamicRange == 4)
srcdims[1] = NX/2;
hdf5DataspaceId[ithread] = H5Screate_simple (3, srcdims, NULL);
bool error = true;
if(hdf5DataspaceId[ithread]>=0){
//fillvalues
hid_t hdf5Dcpl = H5Pcreate(H5P_DATASET_CREATE);
if(hdf5Dcpl>=0){
//fill it
int fill_value = -1;
if(H5Pset_fill_value(hdf5Dcpl, hdf5DataType, &fill_value)>=0){
//dataset
hdf5DatasetId[ithread] = H5Dcreate2 (hdf5fileId[ithread],"run", hdf5DataType, hdf5DataspaceId[ithread],
H5P_DEFAULT, hdf5Dcpl, H5P_DEFAULT);
if(hdf5DatasetId[ithread]>=0){
error = false;
}else cprintf(RED, "error in dataset creation\n");
}else cprintf(RED, "error in filling values\n");
}else cprintf(RED, "error in fill value id creation\n");
}else cprintf(RED, "error in dataspace creation\n");
if(error){
FILE_LOG(logERROR) << "Could not create dataspace/dataset/attribute for thread " << ithread << endl;
pthread_mutex_unlock(&writeMutex);
return FAIL;
}
pthread_mutex_unlock(&writeMutex);
*/
}
#endif
@ -2950,27 +2838,6 @@ void UDPStandardImplementation::stopWriting(int ithread, char* wbuffer){
cprintf(RED,"Error in creating attributes in thread %d\n",ithread);
error.printError();
}
*/
/*
bool error = true;
hsize_t dims = 1;
hid_t hdf5AttributeDataspaceId = H5Screate_simple (1, &dims, NULL);
if(hdf5AttributeDataspaceId>=0){
hid_t hdf5AttributeId = H5Acreate2(hdf5fileId[ithread],"Dynamic Range",H5T_STD_I32LE,hdf5AttributeDataspaceId,
H5P_DEFAULT, H5P_DEFAULT);
if(hdf5AttributeId>=0){
if(H5Awrite(hdf5AttributeId,H5T_STD_I32LE,&dynamicRange)>=0){
if(H5Aclose(hdf5AttributeId)>=0){
error = false;
}
}
}
}
if(error){
FILE_LOG(logERROR) << "Could not create attribute for " << completeFileName[ithread] << endl;
}
*/
/*
pthread_mutex_unlock(&writeMutex);
}
*/