mirror of
https://github.com/slsdetectorgroup/slsDetectorPackage.git
synced 2025-04-24 15:20:02 +02:00
Merge branch 'developer' into eiger
This commit is contained in:
commit
c683f62452
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@ -25,5 +25,5 @@ vcom_adc2 704
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#configure adc chip index adc index value(max 0x7F)
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confadc -1 -1 0x22
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#vetoreference gain index value(max 0x3ff)
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vetoref 1 0x0
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#vetoreference gain index value(max 1023)
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vetoref 1 0
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@ -552,7 +552,7 @@ int readConfigFile() {
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int value = 0;
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// cannot scan values
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if (sscanf(line, "%s %d 0x%x", command, &igain, &value) != 3) {
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if (sscanf(line, "%s %d %d", command, &igain, &value) != 3) {
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sprintf(initErrorMessage,
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"Could not scan vetoref commands from on-board server "
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"config file. Line:[%s].\n",
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@ -1776,7 +1776,7 @@ void getInjectedChannels(int *offset, int *increment) {
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}
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int setVetoReference(int gainIndex, int value) {
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LOG(logINFO, ("Setting veto reference [chip:-1, G%d, value:0x%x]\n",
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LOG(logINFO, ("Setting veto reference [chip:-1, G%d, value:%d]\n",
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gainIndex, value));
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int values[NCHAN];
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int gainIndices[NCHAN];
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@ -1818,7 +1818,7 @@ int configureASICVetoReference(int chipIndex, int *gainIndices, int *values) {
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("Unknown gain index %d for channel %d\n", gainIndices[i], i));
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return FAIL;
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}
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revValues[i] |= gainValue;
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revValues[NCHAN - 1 - i] |= gainValue; // reversed list, so NCHAN - 1 - i
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LOG(logDEBUG2, ("Values[%d]: 0x%x\n", i, revValues[i]));
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}
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@ -6455,7 +6455,7 @@ int set_veto_reference(int file_des) {
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if (receiveData(file_des, args, sizeof(args), INT32) < 0)
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return printSocketReadError();
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LOG(logINFO,
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("Setting Veto Reference: [G%d, value:0x%x]\n", args[0], args[1]));
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("Setting Veto Reference: [G%d, value:%d]\n", args[0], args[1]));
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#ifndef GOTTHARD2D
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functionNotImplemented();
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@ -6473,7 +6473,7 @@ int set_veto_reference(int file_des) {
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} else if (value > ADU_MAX_VAL) {
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ret = FAIL;
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sprintf(mess,
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"Could not set veto reference. Invalid ADU value 0x%x, "
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"Could not set veto reference. Invalid ADU value %d, "
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"must be 12 bit.\n",
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value);
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LOG(logERROR, (mess));
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@ -434,7 +434,8 @@ void DetectorImpl::readFrameFromReceiver() {
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numInterfaces = Parallel(&Module::getNumberofUDPInterfacesFromShm, {})
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.squash(); // cannot pick up from zmq
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}
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bool runningList[zmqSocket.size()], connectList[zmqSocket.size()];
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std::vector<bool> runningList(zmqSocket.size());
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std::vector<bool> connectList(zmqSocket.size());
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int numRunning = 0;
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for (size_t i = 0; i < zmqSocket.size(); ++i) {
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if (zmqSocket[i]->Connect() == 0) {
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@ -461,12 +461,11 @@ std::vector<uint64_t> Module::getNumMissingPackets() const {
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throw RuntimeError("Receiver " + std::to_string(moduleId) +
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" returned error: " + std::string(mess));
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} else {
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int nports = -1;
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int nports = 0;
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client.Receive(&nports, sizeof(nports));
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uint64_t mp[nports];
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memset(mp, 0, sizeof(mp));
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client.Receive(mp, sizeof(mp));
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std::vector<uint64_t> retval(mp, mp + nports);
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std::vector<uint64_t> retval(nports);
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client.Receive(retval.data(),
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sizeof(decltype(retval[0])) * retval.size());
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LOG(logDEBUG1) << "Missing packets of Receiver" << moduleId << ": "
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<< sls::ToString(retval);
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return retval;
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@ -1392,8 +1391,8 @@ void Module::setInjectChannel(const int offsetChannel,
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sendToDetector(F_SET_INJECT_CHANNEL, args, nullptr);
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}
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void Module::sendVetoPhoton(const int chipIndex, std::vector<int> gainIndices,
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std::vector<int> values) {
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void Module::sendVetoPhoton(const int chipIndex, const std::vector<int>& gainIndices,
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const std::vector<int>& values) {
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const int nch = gainIndices.size();
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if (gainIndices.size() != values.size()) {
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throw RuntimeError("Number of Gain Indices and values do not match! "
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@ -1409,6 +1408,8 @@ void Module::sendVetoPhoton(const int chipIndex, std::vector<int> gainIndices,
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auto client = DetectorSocket(shm()->hostname, shm()->controlPort);
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client.Send(&fnum, sizeof(fnum));
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client.Send(args, sizeof(args));
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client.Send(gainIndices.data(), sizeof(decltype(gainIndices[0])) * nch);
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client.Send(values.data(), sizeof(decltype(values[0])) * nch);
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client.Send(gainIndices.data(), sizeof(int) * nch);
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client.Send(values.data(), sizeof(int) * nch);
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client.Receive(&ret, sizeof(ret));
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@ -1680,27 +1681,23 @@ void Module::getBadChannels(const std::string &fname) const {
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}
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// receive badchannels
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int nch = -1;
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std::vector<int> badchannels;
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client.Receive(&nch, sizeof(nch));
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std::vector<int> badchannels(nch);
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if (nch > 0) {
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int temp[nch];
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memset(temp, 0, sizeof(temp));
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client.Receive(temp, sizeof(temp));
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badchannels.insert(badchannels.end(), &temp[0], &temp[nch]);
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for (int i = 0; i < (int)badchannels.size(); ++i) {
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client.Receive(badchannels.data(),
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sizeof(badchannels[0]) * badchannels.size());
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for (size_t i = 0; i < badchannels.size(); ++i) {
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LOG(logDEBUG1) << i << ":" << badchannels[i];
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}
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}
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// save to file
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std::ofstream outfile;
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outfile.open(fname.c_str(), std::ios_base::out);
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std::ofstream outfile(fname);
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if (!outfile.is_open()) {
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throw RuntimeError("Could not create file to save bad channels");
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}
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for (int i = 0; i < nch; ++i) {
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outfile << badchannels[i] << '\n';
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}
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for (auto ch : badchannels)
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outfile << ch << '\n';
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LOG(logDEBUG1) << nch << " bad channels saved to file";
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}
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@ -1713,10 +1710,9 @@ void Module::setBadChannels(const std::string &fname) {
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}
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std::vector<int> badchannels;
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for (std::string line; std::getline(input_file, line);) {
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if (line.find(' ') != std::string::npos) {
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line.erase(line.find(' '));
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}
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if (line.length() >= 1) {
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line.erase(std::remove_if(begin(line), end(line), isspace),
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end(line)); // remove space
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if (!line.empty()) {
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std::istringstream iss(line);
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int ival = 0;
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iss >> ival;
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@ -2140,30 +2136,31 @@ void Module::startPattern() { sendToDetector(F_START_PATTERN); }
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// Moench
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std::map<std::string, std::string> Module::getAdditionalJsonHeader() const {
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//TODO, refactor this function with a more robust sending.
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// Now assuming whitespace separated key value
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if (!shm()->useReceiverFlag) {
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throw RuntimeError("Set rx_hostname first to use receiver parameters "
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"(zmq json header)");
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}
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int fnum = F_GET_ADDITIONAL_JSON_HEADER;
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int ret = FAIL;
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int size = 0;
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auto client = ReceiverSocket(shm()->rxHostname, shm()->rxTCPPort);
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client.Send(&fnum, sizeof(fnum));
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client.Receive(&ret, sizeof(ret));
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client.Send(F_GET_ADDITIONAL_JSON_HEADER);
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auto ret = client.Receive<int>();
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if (ret == FAIL) {
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char mess[MAX_STR_LENGTH]{};
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client.Receive(mess, MAX_STR_LENGTH);
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throw RuntimeError("Receiver " + std::to_string(moduleId) +
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" returned error: " + std::string(mess));
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} else {
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client.Receive(&size, sizeof(size));
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auto size = client.Receive<int>();
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std::string buff(size, '\0');
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std::map<std::string, std::string> retval;
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if (size > 0) {
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char retvals[size * 2][SHORT_STR_LENGTH];
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memset(retvals, 0, sizeof(retvals));
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client.Receive(retvals, sizeof(retvals));
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for (int i = 0; i < size; ++i) {
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retval[retvals[2 * i]] = retvals[2 * i + 1];
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client.Receive(&buff[0], buff.size());
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std::istringstream iss(buff);
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std::string key, value;
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while(iss >> key){
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iss >> value;
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retval[key] = value;
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}
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}
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LOG(logDEBUG) << "Getting additional json header " << ToString(retval);
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@ -2186,26 +2183,20 @@ void Module::setAdditionalJsonHeader(
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"Key cannot be empty. Both can have max 20 characters");
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}
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}
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const int size = jsonHeader.size();
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int fnum = F_SET_ADDITIONAL_JSON_HEADER;
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int ret = FAIL;
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std::ostringstream oss;
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for (auto& it : jsonHeader)
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oss << it.first << ' ' << it.second << ' ';
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auto buff = oss.str();
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const auto size = static_cast<int>(buff.size());
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LOG(logDEBUG) << "Sending to receiver additional json header "
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<< ToString(jsonHeader);
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auto client = ReceiverSocket(shm()->rxHostname, shm()->rxTCPPort);
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client.Send(&fnum, sizeof(fnum));
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client.Send(&size, sizeof(size));
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if (size > 0) {
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char args[size * 2][SHORT_STR_LENGTH];
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memset(args, 0, sizeof(args));
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int iarg = 0;
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for (auto &it : jsonHeader) {
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sls::strcpy_safe(args[iarg], it.first.c_str());
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sls::strcpy_safe(args[iarg + 1], it.second.c_str());
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iarg += 2;
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}
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client.Send(args, sizeof(args));
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}
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client.Receive(&ret, sizeof(ret));
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client.Send(F_SET_ADDITIONAL_JSON_HEADER);
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client.Send(size);
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if (size > 0)
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client.Send(&buff[0], buff.size());
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auto ret = client.Receive<int>();
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if (ret == FAIL) {
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char mess[MAX_STR_LENGTH]{};
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client.Receive(mess, MAX_STR_LENGTH);
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@ -371,8 +371,8 @@ class Module : public virtual slsDetectorDefs {
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void setBurstPeriod(int64_t value);
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std::array<int, 2> getInjectChannel() const;
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void setInjectChannel(const int offsetChannel, const int incrementChannel);
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void sendVetoPhoton(const int chipIndex, std::vector<int> gainIndices,
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std::vector<int> values);
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void sendVetoPhoton(const int chipIndex, const std::vector<int>& gainIndices,
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const std::vector<int>& values);
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void getVetoPhoton(const int chipIndex, const std::string &fname) const;
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void setVetoPhoton(const int chipIndex, const int numPhotons,
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const int energy, const std::string &fname);
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@ -19,9 +19,7 @@ BinaryFile::BinaryFile(int ind, uint32_t *maxf, int *nd, std::string *fname,
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int *dindex, int *nunits, uint64_t *nf, uint32_t *dr,
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uint32_t *portno, bool *smode)
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: File(ind, BINARY, maxf, nd, fname, fpath, findex, owenable, dindex,
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nunits, nf, dr, portno, smode),
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filefd(nullptr), numFramesInFile(0), numActualPacketsInFile(0),
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maxMasterFileSize(2000) {
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nunits, nf, dr, portno, smode) {
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#ifdef VERBOSE
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PrintMembers();
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#endif
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@ -239,6 +237,8 @@ void BinaryFile::CreateMasterFile(bool masterFileWriteEnable,
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(long long int)masterFileAttributes.gateDelay2Ns,
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(long long int)masterFileAttributes.gateDelay3Ns,
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masterFileAttributes.gates, ctime(&t));
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//TODO! snprintf? This would already have been a buffer overflow
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if (strlen(message) > maxMasterFileSize) {
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throw sls::RuntimeError("Master File Size " +
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std::to_string(strlen(message)) +
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@ -51,9 +51,12 @@ class BinaryFile : private virtual slsDetectorDefs, public File {
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private:
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int WriteData(char *buf, int bsize);
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FILE *filefd;
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FILE *filefd = nullptr;
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static FILE *masterfd;
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uint32_t numFramesInFile;
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uint64_t numActualPacketsInFile;
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const size_t maxMasterFileSize;
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uint32_t numFramesInFile = 0;
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uint64_t numActualPacketsInFile = 0;
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//Make sure this is known at compile time
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//TODO! Later away from stack allocation of message
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static constexpr size_t maxMasterFileSize = 2000;
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};
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@ -901,14 +901,12 @@ int ClientInterface::get_frame_index(Interface &socket) {
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}
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int ClientInterface::get_missing_packets(Interface &socket) {
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std::vector<uint64_t> m = impl()->getNumMissingPackets();
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LOG(logDEBUG1) << "missing packets:" << sls::ToString(m);
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int retvalsize = m.size();
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uint64_t retval[retvalsize];
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std::copy(std::begin(m), std::end(m), retval);
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auto missing_packets = impl()->getNumMissingPackets();
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LOG(logDEBUG1) << "missing packets:" << sls::ToString(missing_packets);
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auto size = static_cast<int>(missing_packets.size());
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socket.Send(OK);
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socket.Send(&retvalsize, sizeof(retvalsize));
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socket.Send(retval, sizeof(retval));
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socket.Send(size);
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socket.Send(missing_packets.data(), sizeof(missing_packets[0])* missing_packets.size());
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return OK;
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}
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@ -1200,13 +1198,15 @@ int ClientInterface::restream_stop(Interface &socket) {
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int ClientInterface::set_additional_json_header(Interface &socket) {
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std::map<std::string, std::string> json;
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int size = socket.Receive<int>();
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auto size = socket.Receive<int>();
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if (size > 0) {
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char args[size * 2][SHORT_STR_LENGTH];
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memset(args, 0, sizeof(args));
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socket.Receive(args, sizeof(args));
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for (int i = 0; i < size; ++i) {
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json[args[2 * i]] = args[2 * i + 1];
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std::string buff(size, '\0');
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socket.Receive(&buff[0], buff.size());
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std::istringstream iss(buff);
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std::string key, value;
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while(iss >> key){
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iss >> value;
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json[key] = value;
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}
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}
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verifyIdle(socket);
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@ -1218,18 +1218,15 @@ int ClientInterface::set_additional_json_header(Interface &socket) {
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int ClientInterface::get_additional_json_header(Interface &socket) {
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std::map<std::string, std::string> json = impl()->getAdditionalJsonHeader();
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LOG(logDEBUG1) << "additional json header:" << sls::ToString(json);
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int size = json.size();
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std::ostringstream oss;
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for (auto & it : json){
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oss << it.first << ' ' << it.second << ' ';
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}
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auto buff = oss.str();
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auto size = static_cast<int>(buff.size());
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socket.sendResult(size);
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if (size > 0) {
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char retvals[size * 2][SHORT_STR_LENGTH];
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memset(retvals, 0, sizeof(retvals));
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int iarg = 0;
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for (auto &it : json) {
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sls::strcpy_safe(retvals[iarg], it.first.c_str());
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sls::strcpy_safe(retvals[iarg + 1], it.second.c_str());
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iarg += 2;
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}
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socket.Send(retvals, sizeof(retvals));
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socket.Send(&buff[0], buff.size());
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}
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return OK;
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}
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@ -411,6 +411,7 @@ void DataProcessor::PadMissingPackets(char *buf) {
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/** ctb specific */
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void DataProcessor::RearrangeDbitData(char *buf) {
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//TODO! (Erik) Refactor and add tests
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int totalSize = (int)(*((uint32_t *)buf));
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int ctbDigitalDataBytes =
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totalSize - (*ctbAnalogDataBytes) - (*ctbDbitOffset);
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@ -429,9 +430,8 @@ void DataProcessor::RearrangeDbitData(char *buf) {
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// ceil as numResult8Bits could be decimal
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const int numResult8Bits =
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ceil((double)(numSamples * (*ctbDbitList).size()) / 8.00);
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uint8_t result[numResult8Bits];
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memset(result, 0, numResult8Bits * sizeof(uint8_t));
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uint8_t *dest = result;
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std::vector<uint8_t> result(numResult8Bits);
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uint8_t *dest = &result[0];
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auto *source = (uint64_t *)(buf + digOffset + (*ctbDbitOffset));
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@ -459,6 +459,6 @@ void DataProcessor::RearrangeDbitData(char *buf) {
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}
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// copy back to buf and update size
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memcpy(buf + digOffset, result, numResult8Bits * sizeof(uint8_t));
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memcpy(buf + digOffset, result.data(), numResult8Bits * sizeof(uint8_t));
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(*((uint32_t *)buf)) = numResult8Bits * sizeof(uint8_t);
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}
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|
@ -6,7 +6,7 @@
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#define APIEIGER 0x200729
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#define APICTB 0x200729
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#define APIGOTTHARD 0x200729
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#define APIGOTTHARD2 0x200729
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#define APIJUNGFRAU 0x200729
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#define APIMYTHEN3 0x200729
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#define APIMOENCH 0x200729
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#define APIGOTTHARD2 0x200730
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|
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