Hardcopy of pybind11 instead of using git submodules (#552)

* removed pybind as submodule
* added hardcopy of pybind11 2.10.0
* rename pybind11 folder to avoid conflicts when changing branch

Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch>

libs/pybind/tests/extra_setuptools/test_setuphelper.py

@@ -0,0 +1,151 @@
+import os
+import subprocess
+import sys
+from textwrap import dedent
+
+import pytest
+
+DIR = os.path.abspath(os.path.dirname(__file__))
+MAIN_DIR = os.path.dirname(os.path.dirname(DIR))
+WIN = sys.platform.startswith("win32") or sys.platform.startswith("cygwin")
+
+
+@pytest.mark.parametrize("parallel", [False, True])
+@pytest.mark.parametrize("std", [11, 0])
+def test_simple_setup_py(monkeypatch, tmpdir, parallel, std):
+    monkeypatch.chdir(tmpdir)
+    monkeypatch.syspath_prepend(MAIN_DIR)
+
+    (tmpdir / "setup.py").write_text(
+        dedent(
+            f"""\
+            import sys
+            sys.path.append({MAIN_DIR!r})
+
+            from setuptools import setup, Extension
+            from pybind11.setup_helpers import build_ext, Pybind11Extension
+
+            std = {std}
+
+            ext_modules = [
+                Pybind11Extension(
+                    "simple_setup",
+                    sorted(["main.cpp"]),
+                    cxx_std=std,
+                ),
+            ]
+
+            cmdclass = dict()
+            if std == 0:
+                cmdclass["build_ext"] = build_ext
+
+
+            parallel = {parallel}
+            if parallel:
+                from pybind11.setup_helpers import ParallelCompile
+                ParallelCompile().install()
+
+            setup(
+                name="simple_setup_package",
+                cmdclass=cmdclass,
+                ext_modules=ext_modules,
+            )
+            """
+        ),
+        encoding="ascii",
+    )
+
+    (tmpdir / "main.cpp").write_text(
+        dedent(
+            """\
+            #include <pybind11/pybind11.h>
+
+            int f(int x) {
+                return x * 3;
+            }
+            PYBIND11_MODULE(simple_setup, m) {
+                m.def("f", &f);
+            }
+            """
+        ),
+        encoding="ascii",
+    )
+
+    out = subprocess.check_output(
+        [sys.executable, "setup.py", "build_ext", "--inplace"],
+    )
+    if not WIN:
+        assert b"-g0" in out
+    out = subprocess.check_output(
+        [sys.executable, "setup.py", "build_ext", "--inplace", "--force"],
+        env=dict(os.environ, CFLAGS="-g"),
+    )
+    if not WIN:
+        assert b"-g0" not in out
+
+    # Debug helper printout, normally hidden
+    print(out)
+    for item in tmpdir.listdir():
+        print(item.basename)
+
+    assert (
+        len([f for f in tmpdir.listdir() if f.basename.startswith("simple_setup")]) == 1
+    )
+    assert len(list(tmpdir.listdir())) == 4  # two files + output + build_dir
+
+    (tmpdir / "test.py").write_text(
+        dedent(
+            """\
+            import simple_setup
+            assert simple_setup.f(3) == 9
+            """
+        ),
+        encoding="ascii",
+    )
+
+    subprocess.check_call(
+        [sys.executable, "test.py"], stdout=sys.stdout, stderr=sys.stderr
+    )
+
+
+def test_intree_extensions(monkeypatch, tmpdir):
+    monkeypatch.syspath_prepend(MAIN_DIR)
+
+    from pybind11.setup_helpers import intree_extensions
+
+    monkeypatch.chdir(tmpdir)
+    root = tmpdir
+    root.ensure_dir()
+    subdir = root / "dir"
+    subdir.ensure_dir()
+    src = subdir / "ext.cpp"
+    src.ensure()
+    relpath = src.relto(tmpdir)
+    (ext,) = intree_extensions([relpath])
+    assert ext.name == "ext"
+    subdir.ensure("__init__.py")
+    (ext,) = intree_extensions([relpath])
+    assert ext.name == "dir.ext"
+
+
+def test_intree_extensions_package_dir(monkeypatch, tmpdir):
+    monkeypatch.syspath_prepend(MAIN_DIR)
+
+    from pybind11.setup_helpers import intree_extensions
+
+    monkeypatch.chdir(tmpdir)
+    root = tmpdir / "src"
+    root.ensure_dir()
+    subdir = root / "dir"
+    subdir.ensure_dir()
+    src = subdir / "ext.cpp"
+    src.ensure()
+    (ext,) = intree_extensions([src.relto(tmpdir)], package_dir={"": "src"})
+    assert ext.name == "dir.ext"
+    (ext,) = intree_extensions([src.relto(tmpdir)], package_dir={"foo": "src"})
+    assert ext.name == "foo.dir.ext"
+    subdir.ensure("__init__.py")
+    (ext,) = intree_extensions([src.relto(tmpdir)], package_dir={"": "src"})
+    assert ext.name == "dir.ext"
+    (ext,) = intree_extensions([src.relto(tmpdir)], package_dir={"foo": "src"})
+    assert ext.name == "foo.dir.ext"