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merging refactor (replacing)

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maliakal_d
2019-04-12 10:53:09 +02:00
parent 0bb800cc8a
commit 89a06f099c
1176 changed files with 82698 additions and 159058 deletions
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275
slsDetectorCalibration/interpolatingDetector.h
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@ -1,275 +0,0 @@
#ifndef INTERPOLATINGDETECTOR_H
#define INTERPOLATINGDETECTOR_H
#include "singlePhotonDetector.h"
#include "slsInterpolation.h"
//#define M015
#ifdef MYROOT1
#include <TTree.h>
#endif
#include <iostream>
using namespace std;
class interpolatingDetector : public singlePhotonDetector {
/** @short class to perform pedestal subtraction etc. and find single photon clusters for an analog detector */
public:
/**
Constructor (no error checking if datasize and offsets are compatible!)
\param d detector data structure to be used
\param csize cluster size (should be an odd number). Defaults to 3
\param nsigma number of rms to discriminate from the noise. Defaults to 5
\param sign 1 if photons are positive, -1 if negative
\param cm common mode subtraction algorithm, if any. Defaults to NULL i.e. none
\param nped number of samples for pedestal averaging
\param nd number of dark frames to average as pedestals without photon discrimination at the beginning of the measurement
*/
interpolatingDetector(slsDetectorData<uint16_t> *d, slsInterpolation *inte,
double nsigma=5,
int sign=1,
commonModeSubtraction *cm=NULL,
int nped=1000,
int nd=100, int nnx=-1, int nny=-1) :
singlePhotonDetector(d, 3,nsigma,sign, cm, nped, nd, nnx, nny) , interp(inte), id(0) {
//cout << "**"<< xmin << " " << xmax << " " << ymin << " " << ymax << endl;
fi=new pthread_mutex_t ;
};
interpolatingDetector(interpolatingDetector *orig) : singlePhotonDetector(orig) {
// if (orig->interp)
// interp=(orig->interp)->Clone();
// else
interp=orig->interp;
id=orig->id;
fi=orig->fi;
}
virtual interpolatingDetector *Clone() {
return new interpolatingDetector(this);
}
virtual int setId(int i) {
id=i;
// interp->setId(id);
return id;
};
virtual void prepareInterpolation(int &ok) {
/* cout << "*"<< endl; */
/* #ifdef SAVE_ALL */
/* char tit[1000]; */
/* sprintf(tit,"/scratch/ped_%d.tiff",id); */
/* writePedestals(tit); */
/* sprintf(tit,"/scratch/ped_rms_%d.tiff",id); */
/* writePedestalRMS(tit); */
/* if (gmap) { */
/* sprintf(tit,"/scratch/gmap_%d.tiff",id); */
/* writeGainMap(tit); */
/* } */
/* #endif */
if (interp){
pthread_mutex_lock(fi);
interp->prepareInterpolation(ok);
pthread_mutex_unlock(fi);
}
}
void clearImage() {
if (interp) {
pthread_mutex_lock(fi);
interp->clearInterpolatedImage();
pthread_mutex_unlock(fi);
} else
singlePhotonDetector::clearImage();
};
int getImageSize(int &nnx, int &nny, int &ns) {
if (interp)
return interp->getImageSize(nnx, nny, ns);
else
return analogDetector<uint16_t>::getImageSize(nnx, nny, ns);
};
#ifdef MYROOT1
virtual TH2F *getImage()
#endif
#ifndef MYROOT1
virtual int *getImage()
#endif
{
// cout << "image " << endl;
if (interp)
return interp->getInterpolatedImage();
else
return analogDetector<uint16_t>::getImage();
}
#ifdef MYROOT1
virtual TH2F *addToInterpolatedImage(char *data, int *val, int &nph)
#endif
#ifndef MYROOT1
virtual int *addToInterpolatedImage(char *data, int *val, int &nph)
#endif
{
nph=addFrame(data,val,0);
if (interp)
return interp->getInterpolatedImage();
else
singlePhotonDetector::getImage();
//return NULL;
};
#ifdef MYROOT1
virtual TH2F *addToFlatField(char *data, int *val, int &nph)
#endif
#ifndef MYROOT1
virtual int *addToFlatField(char *data, int *val, int &nph)
#endif
{
nph=addFrame(data,val,1);
if (interp)
return interp->getFlatField();
else
return NULL;
};
void *writeImage(const char * imgname) {
// cout << id << "=" << imgname<< endl;
if (interp)
interp->writeInterpolatedImage(imgname);
else
analogDetector<uint16_t>::writeImage(imgname);
return NULL;
}
int addFrame(char *data, int *ph=NULL, int ff=0) {
singlePhotonDetector::processData(data,ph);
int nph=0;
double int_x, int_y;
double eta_x, eta_y;
if (interp) {
// cout << "int" << endl;
pthread_mutex_lock(fi);
for (nph=0; nph<nphFrame; nph++) {
if (ff) {
interp->addToFlatField((clusters+nph)->quadTot,(clusters+nph)->quad,(clusters+nph)->get_cluster(),eta_x, eta_y);
} else {
interp->getInterpolatedPosition((clusters+nph)->x, (clusters+nph)->y, (clusters+nph)->quadTot,(clusters+nph)->quad,(clusters+nph)->get_cluster(),int_x, int_y);
interp->addToImage(int_x, int_y);
}
}
pthread_mutex_unlock(fi);
}
return nphFrame;
};
virtual void processData(char *data, int *val=NULL) {
switch (dMode) {
case eAnalog:
// cout << "an" << endl;
analogDetector<uint16_t>::processData(data,val);
break;
case ePhotonCounting:
// cout << "spc" << endl;
singlePhotonDetector::processData(data,val);
break;
default:
//cout << "int" << endl;
switch(fMode) {
case ePedestal:
addToPedestal(data);
break;
case eFlat:
if (interp)
addFrame(data,val,1);
else
singlePhotonDetector::processData(data,val);
break;
default:
if (interp)
addFrame(data,val,0);
else
singlePhotonDetector::processData(data,val);
}
}
};
virtual slsInterpolation *getInterpolation(){
return interp;
};
virtual slsInterpolation *setInterpolation(slsInterpolation *ii){
int ok;
interp=ii;
/* pthread_mutex_lock(fi);
if (interp)
interp->prepareInterpolation(ok);
pthread_mutex_unlock(fi); */
// cout << "det" << endl;
return interp;
};
virtual void resetFlatField() { if (interp) {
pthread_mutex_lock(fi);
interp->resetFlatField();
pthread_mutex_unlock(fi);
}
}
virtual int getNSubPixels(){ if (interp) return interp->getNSubPixels(); else return 1;}
virtual int setNSubPixels(int ns) {
if (interp) {
pthread_mutex_lock(fi);
interp->getNSubPixels();
pthread_mutex_unlock(fi);
}
return getNSubPixels();
}
protected:
slsInterpolation *interp;
int id;
pthread_mutex_t *fi;
};
#endif