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moving subframenumber into a 32 bit number, also in stremer, changing json header to mention 4 bit and version number

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This commit is contained in:
Dhanya Maliakal 2017-02-28 15:30:53 +01:00
parent 447c5bb8fe
commit 829ba49c1c
7 changed files with 81 additions and 48 deletions
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3
slsReceiverSoftware/include/DataStreamer.h
View File

@ -172,10 +172,11 @@ class DataStreamer : private virtual slsReceiverDefs, public ThreadObject {
/**
* Create and send Json Header
* @param fnum frame number
* @param snum sub frame number
* @param dummy true if its a dummy header
* @returns 0 if error, else 1
*/
int SendHeader(uint64_t fnum, bool dummy = false);
int SendHeader(uint64_t fnum, uint32_t snum, bool dummy = false);
/** type of thread */
static const std::string TypeName;

49
slsReceiverSoftware/include/GeneralData.h
View File

@ -82,7 +82,8 @@ public:
* @param frameNumber frame number
* @param packetNumber packet number
*/
virtual void GetHeaderInfo(int index, char* packetData, uint64_t& frameNumber, uint32_t& packetNumber) const {
virtual void GetHeaderInfo(int index, char* packetData, uint64_t& frameNumber, uint32_t& packetNumber) const
{
frameNumber = ((uint32_t)(*((uint32_t*)(packetData))));
frameNumber++;
packetNumber = frameNumber&packetIndexMask;
@ -93,15 +94,20 @@ public:
* Get Header Infomation (frame number, packet number)
* @param index thread index for debugging purposes
* @param packetData pointer to data
* @param dynamicRange dynamic range to assign subframenumber if 32 bit mode
* @param frameNumber frame number
* @param packetNumber packet number
* @param subFrameNumber sub frame number if applicable
* @param bunchId bunch id
*/
virtual void GetHeaderInfo(int index, char* packetData, uint32_t dynamicRange,
uint64_t& frameNumber, uint32_t& packetNumber, uint32_t& subFrameNumber, uint64_t bunchId) const {
cprintf(RED,"This is a generic function that should be overloaded by a derived class\n");
virtual void GetHeaderInfo(int index, char* packetData, uint64_t& frameNumber,
uint32_t& packetNumber, uint32_t& subFrameNumber, uint64_t bunchId) const
{
subFrameNumber = -1;
bunchId = -1;
frameNumber = ((uint32_t)(*((uint32_t*)(packetData))));
frameNumber++;
packetNumber = frameNumber&packetIndexMask;
frameNumber = (frameNumber & frameIndexMask) >> frameIndexOffset;
}
/**
@ -368,21 +374,36 @@ private:
* Get Header Infomation (frame number, packet number)
* @param index thread index for debugging purposes
* @param packetData pointer to data
* @param dynamicRange dynamic range to assign subframenumber if 32 bit mode
* @param frameNumber frame number
* @param packetNumber packet number
*/
virtual void GetHeaderInfo(int index, char* packetData, uint64_t& frameNumber, uint32_t& packetNumber) const
{
jfrau_packet_header_t* header = (jfrau_packet_header_t*)(packetData);
frameNumber = (uint64_t)(*( (uint32_t*) header->frameNumber));
packetNumber = (uint32_t)(*( (uint8_t*) header->packetNumber));
}
/**
* Get Header Infomation (frame number, packet number)
* @param index thread index for debugging purposes
* @param packetData pointer to data
* @param frameNumber frame number
* @param packetNumber packet number
* @param subFrameNumber sub frame number if applicable
* @param bunchId bunch id
*/
void GetHeaderInfo(int index, char* packetData, uint32_t dynamicRange,
uint64_t& frameNumber, uint32_t& packetNumber, uint32_t& subFrameNumber, uint64_t bunchId) const {
subFrameNumber = 0;
void GetHeaderInfo(int index, char* packetData, uint64_t& frameNumber,
uint32_t& packetNumber, uint32_t& subFrameNumber, uint64_t bunchId) const
{
subFrameNumber = -1;
jfrau_packet_header_t* header = (jfrau_packet_header_t*)(packetData);
frameNumber = (uint64_t)(*( (uint32_t*) header->frameNumber));
packetNumber = (uint32_t)(*( (uint8_t*) header->packetNumber));
bunchId = (*((uint64_t*) header->bunchid));
}
/**
* Print all variables
*/
@ -454,24 +475,20 @@ private:
* Get Header Infomation (frame number, packet number)
* @param index thread index for debugging purposes
* @param packetData pointer to data
* @param dynamicRange dynamic range to assign subframenumber if 32 bit mode
* @param frameNumber frame number
* @param packetNumber packet number
* @param subFrameNumber sub frame number if applicable
* @param bunchId bunch id
*/
void GetHeaderInfo(int index, char* packetData, uint32_t dynamicRange,
uint64_t& frameNumber, uint32_t& packetNumber, uint32_t& subFrameNumber, uint64_t bunchId) const {
bunchId = 0;
subFrameNumber = 0;
void GetHeaderInfo(int index, char* packetData, uint64_t& frameNumber,
uint32_t& packetNumber, uint32_t& subFrameNumber, uint64_t bunchId) const {
bunchId = -1;
eiger_packet_footer_t* footer = (eiger_packet_footer_t*)(packetData + footerOffset);
frameNumber = (uint64_t)((*( (uint64_t*) footer)) & frameIndexMask);
packetNumber = (uint32_t)(*( (uint16_t*) footer->packetNumber))-1;
if (dynamicRange == 32) {
eiger_packet_header_t* header = (eiger_packet_header_t*) (packetData);
subFrameNumber = (uint64_t) *( (uint32_t*) header->subFrameNumber);
}
}
/**
* Setting dynamic range changes member variables

17
slsReceiverSoftware/include/ZmqSocket.h
View File

@ -234,7 +234,7 @@ public:
* @returns 0 if error, else 1
*/
int ReceiveHeader(const int index, uint64_t &acqIndex,
uint64_t &frameIndex, uint64_t &subframeIndex, string &filename)
uint64_t &frameIndex, uint32_t &subframeIndex, string &filename)
{
zmq_msg_init (&message);
if (ReceiveMessage(index) > 0) {
@ -299,7 +299,7 @@ public:
* @param filename address of file name
*/
int ParseHeader(const int index, uint64_t &acqIndex,
uint64_t &frameIndex, uint64_t &subframeIndex, string &filename)
uint64_t &frameIndex, uint32_t &subframeIndex, string &filename)
{
Document d;
if (d.Parse( (char*)zmq_msg_data(&message), zmq_msg_size(&message)).HasParseError()) {
@ -307,23 +307,22 @@ public:
return 0;
}
#ifdef VERYVERBOSE
// htype is an array of strings
rapidjson::Value::Array htype = d["htype"].GetArray();
for (int i = 0; i < htype.Size(); i++)
printf("%d: htype: %s\n", index, htype[i].GetString());
printf("version:%.1f\n", d["version"].GetDouble());
// shape is an array of ints
rapidjson::Value::Array shape = d["shape"].GetArray();
printf("%d: shape: ", index);
for (int i = 0; i < shape.Size(); i++)
printf("%d: %d ", index, shape[i].GetInt());
printf("\n");
printf("%d: type: %s\n", index, d["type"].GetString());
#endif
if(d["acqIndex"].GetInt()!=-1){
acqIndex = d["acqIndex"].GetInt();
frameIndex = d["fIndex"].GetInt();
subframeIndex = d["subfnum"].GetInt();
acqIndex = d["acqIndex"].GetUint64();
frameIndex = d["fIndex"].GetUint64();
subframeIndex = d["subfnum"].GetUint();
filename = d["fname"].GetString();
#ifdef VERYVERBOSE
cout << "Acquisition index: " << acqIndex << endl;

11
slsReceiverSoftware/include/receiver_defs.h
View File

@ -14,19 +14,22 @@
#define CREATE_FILES 1
#define DO_EVERYTHING 2
//binary
#define FILE_FRAME_HEADER_SIZE 16
//binary file/ fifo
#define FILE_FRAME_HDR_FNUM_SIZE 8
#define FILE_FRAME_HDR_SNUM_SIZE 4
#define FILE_FRAME_HDR_BID_SIZE 8
#define FILE_FRAME_HEADER_SIZE (FILE_FRAME_HDR_FNUM_SIZE + FILE_FRAME_HDR_SNUM_SIZE + FILE_FRAME_HDR_BID_SIZE)
#define FIFO_HEADER_NUMBYTES 4
#define FILE_BUFFER_SIZE (16*1024*1024) //16mb
//hdf5
#define MAX_CHUNKED_IMAGES 1
//versions
#define STREAMER_VERSION 1.0
#define HDF5_WRITER_VERSION 1.0
#define BINARY_WRITER_VERSION 1.0 //1 decimal places
//fifo
#define FIFO_HEADER_NUMBYTES 4
//parameters to calculate fifo depth
#define SAMPLE_TIME_IN_NS 100000000//100ms

1
slsReceiverSoftware/src/DataProcessor.cpp
View File

@ -307,7 +307,6 @@ void DataProcessor::ProcessAnImage(char* buf) {
RecordFirstIndices(fnum);
}
/** bunch id pass as well and then do what with it */
if (fileWriteEnable && *callbackAction == DO_EVERYTHING)
file->WriteToFile(buf, generalData->fifoBufferSize + FILE_FRAME_HEADER_SIZE, fnum-firstMeasurementIndex);
}

19
slsReceiverSoftware/src/DataStreamer.cpp
View File

@ -25,7 +25,7 @@ pthread_mutex_t DataStreamer::Mutex = PTHREAD_MUTEX_INITIALIZER;
const char* DataStreamer::jsonHeaderFormat_part1 =
"{"
"\"htype\":[\"chunk-1.0\"], "
"\"version\":%.1f, "
"\"type\":\"%s\", "
"\"shape\":[%d, %d], ";
@ -33,7 +33,7 @@ const char* DataStreamer::jsonHeaderFormat =
"%s"
"\"acqIndex\":%lld, "
"\"fIndex\":%lld, "
"\"subfnum\":%lld, "
"\"subfnum\":%u, "
"\"fname\":\"%s\"}";
@ -132,7 +132,7 @@ void DataStreamer::ResetParametersforNewMeasurement(){
void DataStreamer::CreateHeaderPart1() {
char type[10] = "";
switch (*dynamicRange) {
case 4: strcpy(type, "uint8"); break;
case 4: strcpy(type, "uint4"); break;
case 8: strcpy(type, "uint8"); break;
case 16: strcpy(type, "uint16"); break;
case 32: strcpy(type, "uint32"); break;
@ -143,7 +143,7 @@ void DataStreamer::CreateHeaderPart1() {
}
sprintf(currentHeader, jsonHeaderFormat_part1,
type, generalData->nPixelsX, generalData->nPixelsY);
STREAMER_VERSION, type, generalData->nPixelsX, generalData->nPixelsY);
#ifdef VERBOSE
cprintf(BLUE, "%d currentheader: %s\n", index, currentHeader);
#endif
@ -233,7 +233,7 @@ void DataStreamer::StopProcessing(char* buf) {
if (!SendHeader(0, true))
cprintf(RED,"Error: Could not send zmq dummy header for streamer %d\n", index);
if (!zmqSocket->SendData(DUMMY_MSG, DUMMY_MSG_SIZE))
if (!zmqSocket->SendData((char*)DUMMY_MSG, DUMMY_MSG_SIZE))
cprintf(RED,"Error: Could not send zmq dummy message for streamer %d\n", index);
fifo->FreeAddress(buf);
@ -246,6 +246,7 @@ void DataStreamer::StopProcessing(char* buf) {
void DataStreamer::ProcessAnImage(char* buf) {
uint64_t fnum = (*((uint64_t*)buf));
uint32_t snum = (*((uint32_t*)(buf + FILE_FRAME_HDR_FNUM_SIZE)));
#ifdef VERBOSE
if (!index) cprintf(MAGENTA,"DataStreamer %d: fnum:%lld\n", index, (long long int)fnum);
#endif
@ -270,7 +271,7 @@ void DataStreamer::ProcessAnImage(char* buf) {
return;
}
if (!SendHeader(fnum))
if (!SendHeader(fnum, snum))
cprintf(RED,"Error: Could not send zmq header for fnum %lld and streamer %d\n",
(long long int) fnum, index);
@ -307,17 +308,17 @@ bool DataStreamer::CheckCount() {
}
int DataStreamer::SendHeader(uint64_t fnum, bool dummy) {
int DataStreamer::SendHeader(uint64_t fnum, uint32_t snum, bool dummy) {
uint64_t frameIndex = -1;
uint64_t acquisitionIndex = -1;
uint64_t subframeIndex = -1;
uint32_t subframeIndex = -1;
char fname[MAX_STR_LENGTH] = "run";
char buf[1000] = "";
if (!dummy) {
frameIndex = fnum - firstMeasurementIndex;
acquisitionIndex = fnum - firstAcquisitionIndex;
subframeIndex = -1; /* subframe to be included in fifo buffer? */
subframeIndex = snum;
/* fname to be included in fifo buffer? */
}

21
slsReceiverSoftware/src/Listener.cpp
View File

@ -265,6 +265,7 @@ void Listener::ThreadExecution() {
}
(*((uint32_t*)buffer)) = rc;
//for those returning earlier
(*((uint64_t*)(buffer + FIFO_HEADER_NUMBYTES ))) = currentFrameIndex;
currentFrameIndex++;
@ -288,8 +289,10 @@ void Listener::StopListening(char* buf) {
uint32_t Listener::ListenToAnImage(char* buf) {
uint32_t rc = 0;
uint64_t fnum = 0; uint32_t pnum = 0;
uint64_t fnum = 0, bid = 0;
uint32_t pnum = 0, snum = 0;
int dsize = generalData->dataSize;
bool isHeaderEmpty = true;
//reset to -1
@ -299,13 +302,18 @@ uint32_t Listener::ListenToAnImage(char* buf) {
//look for carry over
if (carryOverFlag) {
//check if its the current image packet
generalData->GetHeaderInfo(index,carryOverPacket,fnum,pnum);
generalData->GetHeaderInfo(index, carryOverPacket, fnum, pnum, snum, bid);
if (fnum != currentFrameIndex) {
return generalData->imageSize;
}
carryOverFlag = false;
memcpy(buf + (pnum * dsize), carryOverPacket + generalData->headerSizeinPacket, dsize);
if(isHeaderEmpty) {
(*((uint64_t*)(buf - FILE_FRAME_HEADER_SIZE))) = fnum;
(*((uint64_t*)(buf - FILE_FRAME_HEADER_SIZE + FILE_FRAME_HDR_FNUM_SIZE))) = snum;
(*((uint64_t*)(buf - FILE_FRAME_HEADER_SIZE + FILE_FRAME_HDR_FNUM_SIZE + FILE_FRAME_HDR_SNUM_SIZE))) = bid;
isHeaderEmpty = false;
}
}
@ -319,7 +327,7 @@ uint32_t Listener::ListenToAnImage(char* buf) {
//update parameters
numPacketsCaught++; //record immediately to get more time before socket shutdown
numTotalPacketsCaught++;
generalData->GetHeaderInfo(index,listeningPacket,fnum,pnum);
generalData->GetHeaderInfo(index, listeningPacket, fnum, pnum, snum, bid);
lastCaughtFrameIndex = fnum;
#ifdef VERBOSE
if (!index && !pnum) cprintf(GREEN,"Listening %d: fnum:%lld, pnum:%d\n", index, (long long int)fnum, pnum);
@ -327,7 +335,6 @@ uint32_t Listener::ListenToAnImage(char* buf) {
if (!measurementStartedFlag)
RecordFirstIndices(fnum);
//future packet
if (fnum != currentFrameIndex) {
carryOverFlag = true;
@ -337,6 +344,12 @@ uint32_t Listener::ListenToAnImage(char* buf) {
//copy packet
memcpy(buf + (pnum * dsize), listeningPacket + generalData->headerSizeinPacket, dsize);
if(isHeaderEmpty) {
(*((uint64_t*)(buf - FILE_FRAME_HEADER_SIZE))) = fnum;
(*((uint64_t*)(buf - FILE_FRAME_HEADER_SIZE + FILE_FRAME_HDR_FNUM_SIZE))) = snum;
(*((uint64_t*)(buf - FILE_FRAME_HEADER_SIZE + FILE_FRAME_HDR_FNUM_SIZE + FILE_FRAME_HDR_SNUM_SIZE))) = bid;
isHeaderEmpty = false;
}
}
return generalData->imageSize;