10.0.1.rc (#1607)

* Fix conda build and update GitHub Actions versions (10.0.1) (#1596)

* repalce conda build with conda-build, bump actions versions

(cherry picked from commit fbd5edaa82)

* updated github actions versions to run on node 24

(cherry picked from commit c1db2c8958)

* updated workflows

---------

Co-authored-by: lrlunin <lunin.leonid@gmail.com>
Co-authored-by: Alice <alice.mazzoleni@psi.ch>

* Fix/fifo race (#1591) (#1592)

* fix race condition in Fifo::FreeAddress

(cherry picked from commit dd5b2360d6)

* bumped version to 10.0.1 (#1598)

* port of RPM building and gitea workflows (#1599)

* removed uid test (#1604)

* Dev/automate documentation build (#1357) (#1605)

* some test about building docs

* indendation error

* typo -

* forgot to get package hdf5

* had to add shinx and doxygen as well

* oke created environmnet file

* typo

* dont use conda

* dont use conda

* cannot upload artefact commit to gh-pages

* correct copy

* mmh

* try with tokem

* set write permisison

* script to update main_index for versioned documentation

* rename main_index to index

* use absolute path in python script

* update main_index upon a release

* extract release type from version

* copy release notes

* updated links from devdoc to slsDetectorPackage, handling .md for new versions

* changed page source

* updated documentation link in README

* add guideline for Package Versioning to documentation also used as a test

* typo in workflow

* why didnt it copy?

* copied from build instead of docs

* change back - trigger for push

* only trigger for pull_requests and releases

* removed conda environment file

* automatically update documentation paths in release notes

* only keep templated README.md

* added README and updated links

* update Release notes template manually

* generate release notes script not needed anymore

* modified readme to reflect dependencies insides build from source

* subheadings in dependencies

---------

Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch>

* 1001/updated release notes (#1606)

* updated release notes

* updated Release notes

* typo

---------

Co-authored-by: Erik Fröjdh <erik.frojdh@gmail.com>
Co-authored-by: lrlunin <lunin.leonid@gmail.com>
Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch>

.github/workflows/build_documentation.yml

@@ -0,0 +1,126 @@
+name: Build and upload Documentation 
+
+on: 
+    workflow_dispatch: 
+    pull_request:
+        branches:
+            - developer
+            - main
+    push:
+        branches:
+            - developer
+            - main
+    release:
+        types:
+            - published
+
+env: 
+    BUILD_TYPE: RELEASE 
+
+permissions:
+  contents: write  # Required to push to gh-pages branch
+  pages: write     # Required for GitHub Pages deployment
+  id-token: write  # Required for GitHub Pages deployment
+
+jobs:
+    build-and-deploy:
+        strategy: 
+            matrix:
+                patform: [ubuntu-latest]
+                python-version: ["3.12"]
+        runs-on: ${{ matrix.patform }}
+
+        defaults:
+            run:
+                shell: "bash -l {0}"
+
+        steps:
+            - uses: actions/checkout@v6
+              with:
+                fetch-depth: 0  # Fetch all history for proper git operations
+                token: ${{ secrets.GITHUB_TOKEN }}  # Use the default token
+
+            # Extract release version (if triggered by release)
+            - name: Get Release Version
+              id: version
+              run: |
+                if [ "${{ github.event_name }}" == "release" ]; then
+                  VERSION="${{ github.event.release.tag_name }}"
+                  echo "version=${VERSION}" >> $GITHUB_OUTPUT
+                else
+                  echo "version=developer" >> $GITHUB_OUTPUT
+                fi
+
+            - name: Install System Packages
+              uses: awalsh128/cache-apt-pkgs-action@v1.6.1
+              with:
+                packages: libhdf5-dev doxygen libfmt-dev
+                version: 1.0
+
+            - name: Setup Python
+              uses: actions/setup-python@v6
+              with:
+                python-version: 3.12
+                cache: 'pip'
+            
+            - name: Install Python Packages
+              run: pip install sphinx sphinx_rtd_theme breathe pyyaml jinja2 numpy
+               
+
+            - name: Build Documentation
+              run: |
+                mkdir build
+                cd build
+                cmake -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} -DSLS_BUILD_DOCS=ON -DSLS_USE_HDF5=ON -DSLS_USE_PYTHON=ON ..
+                make -j4 
+                make docs
+        
+            # Update main index if this is a release
+            - name: Update version index
+              if: github.event_name == 'release'
+              run: |
+                python docs/main_index/render_main_index.py \
+                --version "${{ steps.version.outputs.version }}" \
+                --date "$(date +'%d.%m.%Y')" 
+            
+            - name: Checkout gh-pages
+              uses: actions/checkout@v6
+              with:
+                ref: gh-pages
+                path: gh-pages
+                
+            
+            - name: Copy documentation and Release notes to versioned folder
+              if: github.event_name == 'release' || (github.event_name == 'push')
+              run: |
+                VERSION="${{ steps.version.outputs.version }}"
+                mkdir -p "gh-pages/${VERSION}"
+                cp -r build/docs/html/. "gh-pages/${VERSION}/"
+                cp docs/main_index/index.html gh-pages/index.html
+                cp docs/main_index/index.html gh-pages/_sources/index.html.txt
+                if [ "${{ github.event_name }}" == "release" ]; then
+                  cp  RELEASE.md "gh-pages/releases/RELEASE_v${VERSION}.md" 
+                fi 
+              
+            - name: Commit and Push changes to gh-pages
+              if: github.event_name == 'release' || (github.event_name == 'push')
+              run: |
+                cd gh-pages
+                git config --global user.name 'github-actions'
+                git config --global user.email 'github-actions@github.com'
+                git add .
+                git commit -m "Update Documentation for ${{ steps.version.outputs.version }}"
+                git remote set-url origin https://x-access-token:${GITHUB_TOKEN}@github.com/${GITHUB_REPOSITORY}.git
+                git push origin gh-pages 
+              env: 
+                GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+
+
+
+
+
+
+
+
+
+

.github/workflows/build_wheel.yml

@@ -20,12 +20,12 @@ jobs:
         os: [ubuntu-latest,]
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v6
 
       - name: Build wheels
-        run: pipx run cibuildwheel==2.23.0
+        run: pipx run cibuildwheel==3.2.1
 
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v7
         with:
           name: cibw-wheels-${{ matrix.os }}-${{ strategy.job-index }}
           path: ./wheelhouse/*.whl
@@ -34,12 +34,12 @@ jobs:
     name: Build source distribution
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v6
 
     - name: Build sdist
       run: pipx run build --sdist
 
-    - uses: actions/upload-artifact@v4
+    - uses: actions/upload-artifact@v7
       with:
         name: cibw-sdist
         path: dist/*.tar.gz
@@ -54,7 +54,7 @@ jobs:
     # or, alternatively, upload to PyPI on every tag starting with 'v' (remove on: release above to use this)
     # if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v')
     steps:
-        - uses: actions/download-artifact@v4
+        - uses: actions/download-artifact@v7
           with:
             # unpacks all CIBW artifacts into dist/
             pattern: cibw-*

.github/workflows/cmake.yaml

@@ -1,6 +1,6 @@
 name: Native CMake Build
 
-on: [push, pull_request]
+on: [push, pull_request] 
 
 env:
   # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.)
@@ -14,14 +14,14 @@ jobs:
     runs-on: ubuntu-latest
     name: Configure and build using cmake
     steps:
-      - uses: actions/checkout@v4
-      - uses: actions/setup-python@v5
+      - uses: actions/checkout@v6
+      - uses: actions/setup-python@v6
         with:
           python-version: 3.12
           cache: 'pip'
       - run: pip install pytest numpy
 
-      - uses: awalsh128/cache-apt-pkgs-action@latest
+      - uses: awalsh128/cache-apt-pkgs-action@v1.6.1
         with:
           packages: libhdf5-dev qtbase5-dev qt5-qmake libqt5svg5-dev libpng-dev libtiff-dev
           version: 1.0
@@ -45,3 +45,8 @@ jobs:
           python -m pytest ${{github.workspace}}/python/tests
 
 
+  
+      
+
+
+

.github/workflows/conda_deploy_library.yaml

@@ -0,0 +1,47 @@
+name: Build and deploy slsdetlib
+
+on:
+  release:
+      types:
+        - published
+
+jobs:
+  build:
+    strategy:
+      fail-fast: false
+      matrix:
+        platform: [ubuntu-latest, ] # macos-12, windows-2019]
+        python-version: ["3.12",]
+
+    runs-on: ${{ matrix.platform }}
+
+    # The setup-miniconda action needs this to activate miniconda
+    defaults:
+      run:
+        shell: "bash -l {0}"
+
+    steps:
+      - uses: actions/checkout@v6
+
+      - name: Get conda
+        uses: conda-incubator/setup-miniconda@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+          channels: conda-forge
+
+      - name: Prepare
+        run: conda install conda-build conda-verify pytest anaconda-client
+
+      - name: Enable upload
+        run: conda config --set anaconda_upload yes
+
+      - name: Build
+        env:
+            CONDA_TOKEN: ${{ secrets.CONDA_TOKEN }}
+        run: conda-build conda-recipes/main-library --user slsdetectorgroup --token ${CONDA_TOKEN} --output-folder build_output
+
+      - name: Upload all Conda to github as artifacts
+        uses: actions/upload-artifact@v7
+        with:
+          name: conda-packages
+          path: build_output/**  # Uploads all packages

.github/workflows/conda_library.yaml

@@ -18,10 +18,10 @@ jobs:
         shell: "bash -l {0}"
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v6
 
       - name: Get conda
-        uses: conda-incubator/setup-miniconda@v3.0.4
+        uses: conda-incubator/setup-miniconda@v4
         with:
           python-version: ${{ matrix.python-version }}
           channels: conda-forge
@@ -33,10 +33,10 @@ jobs:
         run: conda config --set anaconda_upload no
 
       - name: Build
-        run: conda build conda-recipes/main-library --output-folder build_output
+        run: conda-build conda-recipes/main-library --output-folder build_output
 
       - name: Upload all Conda packages
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: conda-packages
           path: build_output/**  # Uploads all packages

.github/workflows/conda_python.yaml

@@ -18,10 +18,10 @@ jobs:
         shell: "bash -l {0}"
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v6
 
       - name: Get conda
-        uses: conda-incubator/setup-miniconda@v3.0.4
+        uses: conda-incubator/setup-miniconda@v4
         with:
           python-version: ${{ matrix.python-version }}
           channels: conda-forge
@@ -33,10 +33,10 @@ jobs:
         run: conda config --set anaconda_upload no
 
       - name: Build
-        run: conda build conda-recipes/python-client --output-folder build_output 
+        run: conda-build conda-recipes/python-client --output-folder build_output
 
       - name: Upload all Conda packages
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: conda-packages
           path: build_output/**  # Uploads all packages