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https://github.com/slsdetectorgroup/slsDetectorPackage.git
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standalone version of angularConversion and postProcessing added
git-svn-id: file:///afs/psi.ch/project/sls_det_software/svn/slsDetectorSoftware@205 951219d9-93cf-4727-9268-0efd64621fa3
This commit is contained in:
bergamaschi
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#ifndef ANGULARCONVERSION_H
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#define ANGULARCONVERSION_H
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//#include "slsDetectorBase.h"
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#include "sls_detector_defs.h"
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#include <string>
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#include <fstream>
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//float angle(int ichan, float encoder, float totalOffset, float conv_r, float center, float offset, float tilt, int direction)
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using namespace std;
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/**
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@short Angular conversion constants needed for a detector module
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*/
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typedef struct {
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float center; /**< center of the module (channel at which the radius is perpendicular to the module surface) */
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float ecenter; /**< error in the center determination */
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float r_conversion; /**< detector pixel size (or strip pitch) divided by the diffractometer radius */
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float er_conversion; /**< error in the r_conversion determination */
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float offset; /**< the module offset i.e. the position of channel 0 with respect to the diffractometer 0 */
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float eoffset; /**< error in the offset determination */
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float tilt; /**< ossible tilt in the orthogonal direction (unused)*/
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float etilt; /**< error in the tilt determination */
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} angleConversionConstant;
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/**
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@short methods to set/unset the angular conversion and merge the data
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class containing the methods to set/unset the angular conversion and merge the data
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The angular conversion itself is defined by the angle() function defined in usersFunctions.cpp
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*/
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class angularConversion : public virtual slsDetectorDefs { //: public virtual slsDetectorBase {
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public:
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/** default constructor */
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angularConversion(int*, float*, float*, float*, float*);
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/** virtual destructor */
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virtual ~angularConversion();
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//virtual int readAngularConversion(string fname)=0;
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/**
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reads an angular conversion file
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\param fname file to be read
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\param nmod number of modules (maximum) to be read
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\param angOff pointer to array of angleConversionConstants
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\returns OK or FAIL
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*/
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static int readAngularConversion(string fname, int nmod, angleConversionConstant *angOff);
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/**
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reads an angular conversion file
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\param ifstream input file stream to be read
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\param nmod number of modules (maximum) to be read
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\param angOff pointer to array of angleConversionConstants
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\returns OK or FAIL
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*/
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static int readAngularConversion(ifstream& ifs, int nmod, angleConversionConstant *angOff);
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/**
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writes an angular conversion file
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\param fname file to be written
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\param nmod number of modules to be written
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\param angOff pointer to array of angleConversionConstants
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\returns OK or FAIL
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*/
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static int writeAngularConversion(string fname, int nmod, angleConversionConstant *angOff);
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/**
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writes an angular conversion file
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\param ofstream output file stream
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\param nmod number of modules to be written
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\param angOff pointer to array of angleConversionConstants
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\returns OK or FAIL
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*/
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static int writeAngularConversion(ofstream& ofs, int nmod, angleConversionConstant *angOff);
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/**
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sets the arrays of the merged data to 0. NB The array should be created with size nbins >= 360./getBinSize();
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\param mp already merged postions
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\param mv already merged data
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\param me already merged errors (squared sum)
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\param mm multiplicity of merged arrays
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\param nbins number of bins
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\returns OK or FAIL
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*/
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static int resetMerging(float *mp, float *mv,float *me, int *mm, int nbins);
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/**
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sets the arrays of the merged data to 0. NB The array should be created with size >= 360./getBinSize();
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\param mp already merged postions
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\param mv already merged data
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\param me already merged errors (squared sum)
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\param mm multiplicity of merged arrays
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\returns OK or FAIL
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*/
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int resetMerging(float *mp, float *mv,float *me, int *mm);
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/**
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creates the arrays for merging the data and sets them to 0.
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*/
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int resetMerging();
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/**
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merge dataset
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\param p1 angular positions of dataset
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\param v1 data
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\param e1 errors
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\param mp already merged postions
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\param mv already merged data
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\param me already merged errors (squared sum)
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\param mm multiplicity of merged arrays
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\param nchans number of channels
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\param binsize size of angular bin
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\param nb number of angular bins
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\param badChanMask badchannelmask (if NULL does not correct for bad channels)
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\returns OK or FAIL
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*/
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static int addToMerging(float *p1, float *v1, float *e1, float *mp, float *mv,float *me, int *mm, int nchans, float binsize,int nb, int *badChanMask );
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/**
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merge dataset
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\param p1 angular positions of dataset
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\param v1 data
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\param e1 errors
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\param mp already merged postions
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\param mv already merged data
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\param me already merged errors (squared sum)
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\param mm multiplicity of merged arrays
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\param badChanMask badchannelmask (if NULL does not correct for bad channels)
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\returns OK or FAIL
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*/
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int addToMerging(float *p1, float *v1, float *e1, float *mp, float *mv,float *me, int *mm, int *badChanMask);
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/**
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merge dataset
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\param p1 angular positions of dataset
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\param v1 data
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\param e1 errors
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\param badChanMask badchannelmask (if NULL does not correct for bad channels)
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\returns OK or FAIL
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*/
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int addToMerging(float *p1, float *v1, float *e1,int *badChanMask);
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/**
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calculates the "final" positions, data value and errors for the merged data
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\param mp already merged postions
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\param mv already merged data
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\param me already merged errors (squared sum)
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\param mm multiplicity of merged arrays
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\param nb number of bins
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\returns FAIL or the number of non empty bins (i.e. points belonging to the pattern)
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*/
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static int finalizeMerging(float *mp, float *mv,float *me, int *mm, int nb);
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/**
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calculates the "final" positions, data value and errors for the merged data
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\param mp already merged postions
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\param mv already merged data
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\param me already merged errors (squared sum)
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\param mm multiplicity of merged arrays
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\returns FAIL or the number of non empty bins (i.e. points belonging to the pattern)
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*/
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int finalizeMerging(float *mp, float *mv,float *me, int *mm);
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/**
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calculates the "final" positions, data value and errors for the merged data
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\returns FAIL or the number of non empty bins (i.e. points belonging to the pattern)
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*/
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int finalizeMerging();
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/**
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set detector global offset
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\param f global offset to be set
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\returns actual global offset
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*/
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float setGlobalOffset(float f){return setAngularConversionParameter(GLOBAL_OFFSET,f);};
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/**
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set detector fine offset
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\param f global fine to be set
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\returns actual fine offset
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*/
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float setFineOffset(float f){return setAngularConversionParameter(FINE_OFFSET,f);};
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/**
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get detector fine offset
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\returns actual fine offset
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*/
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float getFineOffset(){return getAngularConversionParameter(FINE_OFFSET);};
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/**
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get detector global offset
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\returns actual global offset
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*/
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float getGlobalOffset(){return getAngularConversionParameter(GLOBAL_OFFSET);};
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/**
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set detector bin size
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\param bs bin size to be set
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\returns actual bin size
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*/
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float setBinSize(float bs){if (bs>0) nBins=360/bs; return setAngularConversionParameter(BIN_SIZE,bs);};
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/**
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get detector bin size
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\returns detector bin size used for merging (approx angular resolution)
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*/
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float getBinSize() {return getAngularConversionParameter(BIN_SIZE);};
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/**
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get angular direction
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\returns actual angular direction (1 is channel number increasing with angle, -1 decreasing)
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*/
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int getAngularDirection(){return (int)getAngularConversionParameter(ANGULAR_DIRECTION);};
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/**
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set angular direction
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\param d angular direction to be set (1 is channel number increasing with angle, -1 decreasing)
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\returns actual angular direction (1 is channel number increasing with angle, -1 decreasing)
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*/
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int setAngularDirection(int d){return (int)setAngularConversionParameter(ANGULAR_DIRECTION, (float)d);};
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/**
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\returns number of angular bins in the merging (360./binsize)
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*/
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int getNumberOfAngularBins(){return nBins;};
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/**
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set angular conversion parameter
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\param c parameter type (globaloffset, fineoffset, binsize, angular direction, move flag)
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\param v value to be set
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\returns actual value
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*/
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float setAngularConversionParameter(angleConversionParameter c, float v);
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/**
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get angular conversion parameter
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\param c parameter type (globaloffset, fineoffset, binsize, angular direction, move flag)
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\returns actual value
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*/
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float getAngularConversionParameter(angleConversionParameter c);
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/**
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set positions for the acquisition
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\param nPos number of positions
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\param pos array with the encoder positions
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\returns number of positions
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*/
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virtual int setPositions(int nPos, float *pos);
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/**
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get positions for the acquisition
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\param pos array which will contain the encoder positions
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\returns number of positions
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*/
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virtual int getPositions(float *pos=NULL);
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/**
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deletes the array of merged data
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\returns OK
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*/
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int deleteMerging();
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/**
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\returns pointer to the array o merged positions
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*/
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float *getMergedPositions(){return mergingBins;};
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/**
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\returns pointer to the array of merged counts
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*/
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float *getMergedCounts(){return mergingCounts;};
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/**
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\returns pointer to the array of merged errors
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*/
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float *getMergedErrors(){return mergingErrors;};
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/* /\** */
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/* reads teh angular conversion file for the (multi)detector and writes it to shared memory */
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/* *\/ */
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/* virtual int readAngularConversionFile(string fname="")=0; */
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/* /\** */
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/* get angular conversion */
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/* \param direction reference to diffractometer direction */
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/* \param angconv array that will be filled with the angular conversion constants */
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/* \returns 0 if angular conversion disabled, >0 otherwise */
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/* *\/ */
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/* virtual int getAngularConversion(int &direction, angleConversionConstant *angconv=NULL)=0; */
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/* /\** */
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/* pure virtual function */
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/* \param file name to be written (nmod and array of angular conversion constants default to the ones ot the slsDetector */
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/* *\/ */
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/* virtual int writeAngularConversion(string fname)=0; */
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/* /\** */
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/* \returns number of modules of the (multi)detector */
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/* *\/ */
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/* virtual int getNMods()=0; */
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/* /\** */
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/* returns number of channels in the module */
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/* \param imod module number */
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/* \returns number of channels in the module */
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/* *\/ */
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/* virtual int getChansPerMod(int imod=0)=0; */
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/* /\** */
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/* get the angular conversion contant of one modules */
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/* \param imod module number */
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/* \returns pointer to the angular conversion constant */
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/* *\/ */
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/* virtual angleConversionConstant *getAngularConversionPointer(int imod=0)=0; */
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/* /\** */
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/* \param imod module number */
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/* \returns move flag of the module (1 encoder is added to the angle, 0 not) */
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/* *\/ */
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/* virtual int getMoveFlag(int imod)=0; */
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/* /\** */
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/* enables/disable the angular conversion */
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/* \param i 1 sets, 0 unsets,, -1 gets */
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/* \returns actual angular conversion flag */
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/* *\/ */
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/* virtual int setAngularCorrectionMask(int i=-1)=0; */
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/**
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converts channel number to angle
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\param pos encoder position
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\returns array of angles corresponding to the channels
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*/
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float* convertAngles(float pos);
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/**
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converts channel number to angle for the current encoder position
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\returns array of angles corresponding to the channels
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*/
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float *convertAngles(){return convertAngles(currentPosition);};
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/**
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returns number of positions
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*/
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int getNumberOfPositions() {return *numberOfPositions;};
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int setTotalNumberOfChannels(int i){if (i>=0) totalNumberOfChannels=i; return totalNumberOfChannels;};
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void incrementPositionIndex() {currentPositionIndex++;};
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protected:
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private:
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/** merging bins */
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float *mergingBins;
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/** merging counts */
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float *mergingCounts;
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/** merging errors */
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float *mergingErrors;
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/** merging multiplicity */
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int *mergingMultiplicity;
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float (*angle)(float, float, float, float, float, float, float, int);
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int totalNumberOfChannels;
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int moveFlag[MAXMODS*MAXDET];
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/** pointer to number of positions for the acquisition*/
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int *numberOfPositions;
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/** pointer to the detector positions for the acquisition*/
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float *detPositions;
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/** pointer to angular bin size*/
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float *binSize;
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int *correctionMask;
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int chansPerMod;
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int nMod;
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angleConversionConstant angConvs[MAXMODS*MAXDET];
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int directions[MAXMODS*MAXDET];
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/** pointer to beamlien fine offset*/
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float *fineOffset;
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/** pointer to beamlien global offset*/
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float *globalOffset;
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/** pointer to beamlien angular direction*/
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int *angDirection;
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/** pointer to detector move flag (1 moves with encoder, 0 not)*/
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// int *moveFlag;
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/** number of bins for angular conversion (360./binsize)*/
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int nBins;
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/**
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current position of the detector
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*/
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float currentPosition;
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/**
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current position index of the detector
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*/
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int currentPositionIndex;
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/**
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returns current position index
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*/
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int getCurrentPositionIndex() {return currentPositionIndex;};
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void registerAngleFunctionCallback(float( *fun)(float, float, float, float, float, float, float, int)) {angle = fun;};
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};
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#endif
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