aare/include/aare/RawFile.hpp
Erik Fröjdh 4c750cc3be
Fixing ROI read of RawFile (#125)
- Bugfixes
- New abstraction for detector geometry
- Tests for updating geo with ROI
2025-02-11 11:08:22 +01:00

126 lines
3.4 KiB
C++

#pragma once
#include "aare/FileInterface.hpp"
#include "aare/RawMasterFile.hpp"
#include "aare/Frame.hpp"
#include "aare/NDArray.hpp" //for pixel map
#include "aare/RawSubFile.hpp"
#include <optional>
namespace aare {
struct ModuleConfig {
int module_gap_row{};
int module_gap_col{};
bool operator==(const ModuleConfig &other) const {
if (module_gap_col != other.module_gap_col)
return false;
if (module_gap_row != other.module_gap_row)
return false;
return true;
}
};
/**
* @brief Class to read .raw files. The class will parse the master file
* to find the correct geometry for the frames.
* @note A more generic interface is available in the aare::File class.
* Consider using that unless you need raw file specific functionality.
*/
class RawFile : public FileInterface {
size_t n_subfiles{}; //f0,f1...fn
size_t n_subfile_parts{}; // d0,d1...dn
//TODO! move to vector of SubFile instead of pointers
std::vector<std::vector<RawSubFile *>> subfiles; //subfiles[f0,f1...fn][d0,d1...dn]
// std::vector<xy> positions;
ModuleConfig cfg{0, 0};
RawMasterFile m_master;
size_t m_current_frame{};
// std::vector<ModuleGeometry> m_module_pixel_0;
// size_t m_rows{};
// size_t m_cols{};
DetectorGeometry m_geometry;
public:
/**
* @brief RawFile constructor
* @param fname path to the master file (.json)
* @param mode file mode (only "r" is supported at the moment)
*/
RawFile(const std::filesystem::path &fname, const std::string &mode = "r");
virtual ~RawFile() override;
Frame read_frame() override;
Frame read_frame(size_t frame_number) override;
std::vector<Frame> read_n(size_t n_frames) override;
void read_into(std::byte *image_buf) override;
void read_into(std::byte *image_buf, size_t n_frames) override;
//TODO! do we need to adapt the API?
void read_into(std::byte *image_buf, DetectorHeader *header);
void read_into(std::byte *image_buf, size_t n_frames, DetectorHeader *header);
size_t frame_number(size_t frame_index) override;
size_t bytes_per_frame() override;
size_t pixels_per_frame() override;
size_t bytes_per_pixel() const;
void seek(size_t frame_index) override;
size_t tell() override;
size_t total_frames() const override;
size_t rows() const override;
size_t cols() const override;
size_t bitdepth() const override;
xy geometry();
size_t n_mod() const;
RawMasterFile master() const;
DetectorType detector_type() const override;
private:
/**
* @brief read the frame at the given frame index into the image buffer
* @param frame_number frame number to read
* @param image_buf buffer to store the frame
*/
void get_frame_into(size_t frame_index, std::byte *frame_buffer, DetectorHeader *header = nullptr);
/**
* @brief get the frame at the given frame index
* @param frame_number frame number to read
* @return Frame
*/
Frame get_frame(size_t frame_index);
/**
* @brief read the header of the file
* @param fname path to the data subfile
* @return DetectorHeader
*/
static DetectorHeader read_header(const std::filesystem::path &fname);
// void update_geometry_with_roi();
int find_number_of_subfiles();
void open_subfiles();
void find_geometry();
};
} // namespace aare