import sys sys.path.append('/home/l_msdetect/erik/aare/build') #Our normal python imports from pathlib import Path import matplotlib.pyplot as plt import numpy as np import boost_histogram as bh import time from aare import File, ClusterFinder, VarClusterFinder base = Path('/mnt/sls_det_storage/matterhorn_data/aare_test_data/') f = File(base/'Moench03new/cu_half_speed_master_4.json') cf = ClusterFinder((400,400), (3,3)) for i in range(1000): cf.push_pedestal_frame(f.read_frame()) fig, ax = plt.subplots() im = ax.imshow(cf.pedestal()) cf.pedestal() cf.noise() N = 500 t0 = time.perf_counter() hist1 = bh.Histogram(bh.axis.Regular(40, -2, 4000)) f.seek(0) t0 = time.perf_counter() data = f.read_n(N) t_elapsed = time.perf_counter()-t0 n_bytes = data.itemsize*data.size print(f'Reading {N} frames took {t_elapsed:.3f}s {N/t_elapsed:.0f} FPS, {n_bytes/1024**2:.4f} GB/s') for frame in data: a = cf.find_clusters(frame) clusters = cf.steal_clusters() # t_elapsed = time.perf_counter()-t0 # print(f'Clustering {N} frames took {t_elapsed:.2f}s {N/t_elapsed:.0f} FPS') # t0 = time.perf_counter() # total_clusters = clusters.size # hist1.fill(clusters.sum()) # t_elapsed = time.perf_counter()-t0 # print(f'Filling histogram with the sum of {total_clusters} clusters took: {t_elapsed:.3f}s, {total_clusters/t_elapsed:.3g} clust/s') # print(f'Average number of clusters per frame {total_clusters/N:.3f}')