import sys sys.path.append('/home/l_msdetect/erik/aare/build') #Our normal python imports from pathlib import Path import matplotlib.pyplot as plt import numpy as np import boost_histogram as bh import time from aare import File, ClusterFinder, VarClusterFinder, ClusterFile base = Path('/mnt/sls_det_storage/matterhorn_data/aare_test_data/') f = File(base/'Moench03new/cu_half_speed_master_4.json') from aare._aare import ClusterFinderMT, ClusterCollector, ClusterFileSink cf = ClusterFinderMT((400,400), (3,3), n_threads = 3) # collector = ClusterCollector(cf) out_file = ClusterFileSink(cf, "test.clust") for i in range(1000): img = f.read_frame() cf.push_pedestal_frame(img) print('Pedestal done') cf.sync() for i in range(100): img = f.read_frame() cf.find_clusters(img) # time.sleep(1) cf.stop() time.sleep(1) print('Second run') cf.start() for i in range(100): img = f.read_frame() cf.find_clusters(img) cf.stop() print('Third run') cf.start() for i in range(129): img = f.read_frame() cf.find_clusters(img) cf.stop() out_file.stop() print('Done') cfile = ClusterFile("test.clust") i = 0 while True: try: cv = cfile.read_frame() i+=1 except RuntimeError: break print(f'Read {i} frames') # cf = ClusterFinder((400,400), (3,3)) # for i in range(1000): # cf.push_pedestal_frame(f.read_frame()) # fig, ax = plt.subplots() # im = ax.imshow(cf.pedestal()) # cf.pedestal() # cf.noise() # N = 500 # t0 = time.perf_counter() # hist1 = bh.Histogram(bh.axis.Regular(40, -2, 4000)) # f.seek(0) # t0 = time.perf_counter() # data = f.read_n(N) # t_elapsed = time.perf_counter()-t0 # n_bytes = data.itemsize*data.size # print(f'Reading {N} frames took {t_elapsed:.3f}s {N/t_elapsed:.0f} FPS, {n_bytes/1024**2:.4f} GB/s') # for frame in data: # a = cf.find_clusters(frame) # clusters = cf.steal_clusters() # t_elapsed = time.perf_counter()-t0 # print(f'Clustering {N} frames took {t_elapsed:.2f}s {N/t_elapsed:.0f} FPS') # t0 = time.perf_counter() # total_clusters = clusters.size # hist1.fill(clusters.sum()) # t_elapsed = time.perf_counter()-t0 # print(f'Filling histogram with the sum of {total_clusters} clusters took: {t_elapsed:.3f}s, {total_clusters/t_elapsed:.3g} clust/s') # print(f'Average number of clusters per frame {total_clusters/N:.3f}')