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https://github.com/slsdetectorgroup/aare.git
synced 2026-02-19 22:38:43 +01:00
extra methods in CtbRawFile
This commit is contained in:
Erik Fröjdh
@@ -2,13 +2,13 @@
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namespace aare {
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RawFileNameComponents::RawFileNameComponents(const std::filesystem::path &fname) {
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RawFileNameComponents::RawFileNameComponents(
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const std::filesystem::path &fname) {
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m_base_path = fname.parent_path();
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m_base_name = fname.stem();
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m_ext = fname.extension();
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//parse file index
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// parse file index
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try {
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auto pos = m_base_name.rfind('_');
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m_file_index = std::stoi(m_base_name.substr(pos + 1));
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@@ -16,86 +16,132 @@ RawFileNameComponents::RawFileNameComponents(const std::filesystem::path &fname)
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throw std::runtime_error(LOCATION + "Could not parse file index");
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}
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//remove master from base name
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// remove master from base name
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auto pos = m_base_name.find("_master_");
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if (pos != std::string::npos) {
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m_base_name.erase(pos);
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}else{
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throw std::runtime_error(LOCATION + "Could not find _master_ in file name");
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} else {
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throw std::runtime_error(LOCATION +
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"Could not find _master_ in file name");
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}
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}
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RawMasterFile::RawMasterFile(const std::filesystem::path &fpath)
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: m_fnc(fpath) {
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if (!std::filesystem::exists(fpath)) {
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throw std::runtime_error(LOCATION + " File does not exist");
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}
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if (m_fnc.ext() == ".json") {
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parse_json(fpath);
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} else if (m_fnc.ext() == ".raw") {
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parse_raw(fpath);
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} else {
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throw std::runtime_error(LOCATION + "Unsupported file type");
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}
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}
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std::filesystem::path RawMasterFile::data_fname(size_t mod_id,
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size_t file_id) const {
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return m_fnc.data_fname(mod_id, file_id);
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}
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const std::string &RawMasterFile::version() const { return m_version; }
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const DetectorType &RawMasterFile::detector_type() const { return m_type; }
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const TimingMode &RawMasterFile::timing_mode() const { return m_timing_mode; }
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size_t RawMasterFile::image_size_in_bytes() const {
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return m_image_size_in_bytes;
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}
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size_t RawMasterFile::frames_in_file() const { return m_frames_in_file; }
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size_t RawMasterFile::pixels_y() const { return m_pixels_y; }
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size_t RawMasterFile::pixels_x() const { return m_pixels_x; }
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size_t RawMasterFile::max_frames_per_file() const {
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return m_max_frames_per_file;
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}
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size_t RawMasterFile::bitdepth() const { return m_bitdepth; }
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size_t RawMasterFile::frame_padding() const { return m_frame_padding; }
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const FrameDiscardPolicy &RawMasterFile::frame_discard_policy() const {
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return m_frame_discard_policy;
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}
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// optional values, these may or may not be present in the master file
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// and are therefore modeled as std::optional
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std::optional<size_t> RawMasterFile::analog_samples() const {
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return m_analog_samples;
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}
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std::optional<size_t> RawMasterFile::digital_samples() const {
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return m_digital_samples;
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}
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void RawMasterFile::parse_json(const std::filesystem::path &fpath) {
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std::ifstream ifs(fpath);
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json j;
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ifs >> j;
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double v = j["Version"];
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m_version = fmt::format("{:.1f}", v);
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std::ifstream ifs(fpath);
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json j;
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ifs >> j;
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double v = j["Version"];
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m_version = fmt::format("{:.1f}", v);
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m_type = StringTo<DetectorType>(j["Detector Type"].get<std::string>());
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m_timing_mode =
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StringTo<TimingMode>(j["Timing Mode"].get<std::string>());
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m_type = StringTo<DetectorType>(j["Detector Type"].get<std::string>());
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m_timing_mode = StringTo<TimingMode>(j["Timing Mode"].get<std::string>());
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m_image_size_in_bytes = j["Image Size in bytes"];
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m_frames_in_file = j["Frames in File"];
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m_pixels_y = j["Pixels"]["y"];
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m_pixels_x = j["Pixels"]["x"];
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m_image_size_in_bytes = j["Image Size in bytes"];
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m_frames_in_file = j["Frames in File"];
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m_pixels_y = j["Pixels"]["y"];
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m_pixels_x = j["Pixels"]["x"];
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m_max_frames_per_file = j["Max Frames Per File"];
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m_max_frames_per_file = j["Max Frames Per File"];
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//Not all detectors write the bitdepth but in case
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//its not there it is 16
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try {
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m_bitdepth = j.at("Dynamic Range");
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} catch (const json::out_of_range &e) {
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m_bitdepth = 16;
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}
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// Not all detectors write the bitdepth but in case
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// its not there it is 16
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try {
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m_bitdepth = j.at("Dynamic Range");
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} catch (const json::out_of_range &e) {
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m_bitdepth = 16;
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}
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m_frame_padding = j["Frame Padding"];
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m_frame_discard_policy = StringTo<FrameDiscardPolicy>(
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j["Frame Discard Policy"].get<std::string>());
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m_frame_padding = j["Frame Padding"];
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m_frame_discard_policy = StringTo<FrameDiscardPolicy>(
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j["Frame Discard Policy"].get<std::string>());
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try {
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m_analog_samples = j.at("Analog Samples");
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}catch (const json::out_of_range &e) {
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// m_analog_samples = 0;
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}
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// try{
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// std::string adc_mask = j.at("ADC Mask");
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// m_adc_mask = std::stoul(adc_mask, nullptr, 16);
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// }catch (const json::out_of_range &e) {
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// m_adc_mask = 0;
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// }
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try {
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m_analog_samples = j.at("Analog Samples");
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} catch (const json::out_of_range &e) {
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// m_analog_samples = 0;
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}
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// try{
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// std::string adc_mask = j.at("ADC Mask");
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// m_adc_mask = std::stoul(adc_mask, nullptr, 16);
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// }catch (const json::out_of_range &e) {
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// m_adc_mask = 0;
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// }
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try {
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m_digital_samples = j.at("Digital Samples");
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}catch (const json::out_of_range &e) {
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// m_digital_samples = 0;
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}
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try {
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m_digital_samples = j.at("Digital Samples");
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} catch (const json::out_of_range &e) {
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// m_digital_samples = 0;
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}
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// //Update detector type for Moench
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// //TODO! How does this work with old .raw master files?
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// if (m_type == DetectorType::Moench && m_analog_samples == 0 &&
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// m_subfile_rows == 400) {
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// m_type = DetectorType::Moench03;
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// }else if (m_type == DetectorType::Moench && m_subfile_rows == 400 &&
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// m_analog_samples == 5000) {
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// m_type = DetectorType::Moench03_old;
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// }
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// //Update detector type for Moench
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// //TODO! How does this work with old .raw master files?
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// if (m_type == DetectorType::Moench && m_analog_samples == 0 &&
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// m_subfile_rows == 400) {
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// m_type = DetectorType::Moench03;
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// }else if (m_type == DetectorType::Moench && m_subfile_rows == 400 &&
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// m_analog_samples == 5000) {
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// m_type = DetectorType::Moench03_old;
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// }
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// //Here we know we have a ChipTestBoard file update the geometry?
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// //TODO! Carry on information about digtial, and transceivers
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// if (m_type == DetectorType::ChipTestBoard) {
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// subfile_rows = 1;
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// subfile_cols = m_analog_samples*__builtin_popcount(m_adc_mask);
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// }
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// //Here we know we have a ChipTestBoard file update the geometry?
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// //TODO! Carry on information about digtial, and transceivers
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// if (m_type == DetectorType::ChipTestBoard) {
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// subfile_rows = 1;
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// subfile_cols = m_analog_samples*__builtin_popcount(m_adc_mask);
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// }
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// // only Eiger had quad
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// if (m_type == DetectorType::Eiger) {
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// quad = (j["Quad"] == 1);
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// }
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// // only Eiger had quad
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// if (m_type == DetectorType::Eiger) {
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// quad = (j["Quad"] == 1);
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// }
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// m_geometry = {j["Geometry"]["y"], j["Geometry"]["x"]};
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// m_geometry = {j["Geometry"]["y"], j["Geometry"]["x"]};
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}
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void RawMasterFile::parse_raw(const std::filesystem::path &fpath) {
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throw std::runtime_error("Not implemented");
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