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Feature/reactivate python bindings (#74)

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major changes:
- add python bindings for all c++ features except network_io
- changes to cross compile on windows,linux and macos
- fix bugs with cluster_finder
- use Dtype in Frame instead of bitdepth
- remove boost::program_options and replace with our implementation 
- add Transforms class that applies a sequence of functions (c++ or
python functions) on a Frame.
- remove frame reorder and flip from SubFile.cpp. use Transforms instead
- Test clusterFinder and Pedestal results in comparison with
slsDetectorCalibration

---------

Co-authored-by: Bechir <bechir.brahem420@gmail.com>
Co-authored-by: Erik Fröjdh <erik.frojdh@gmail.com>
This commit is contained in:
Bechir Braham
2024-07-04 11:51:48 +02:00
committed by GitHub
parent 5b7ab5a810
commit 68dcfca74e
107 changed files with 11451 additions and 1476 deletions
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52
examples/zmq_restream_example.cpp
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@@ -1,56 +1,26 @@
#include "aare.hpp"
#include "aare/examples/defs.hpp"
#include <boost/program_options.hpp>
#include <chrono>
#include <thread>
using namespace aare;
using namespace std;
namespace po = boost::program_options;
int main(int argc, char **argv) {
aare::logger::set_verbosity(aare::logger::DEBUG);
po::options_description desc("Allowed options");
desc.add_options()("help", "produce help message")("file,f", po::value<string>(), "input file")(
"port,p", po::value<uint16_t>(), "port number")("fps", po::value<uint16_t>()->default_value(1),
"frames per second (default 1)")("loop,l",
"loop over the file");
po::positional_options_description pd;
pd.add("file", -1);
ArgParser parser("Zmq restream example");
parser.add_option("file", "f", true, true, "", "input file");
parser.add_option("port", "p", true, true, "", "port number");
parser.add_option("fps", "fp", true, false, "1", "frames per second");
parser.add_option("loop", "l", false, false, "", "loop over the file");
po::variables_map vm;
try {
auto parsed = po::command_line_parser(argc, argv).options(desc).positional(pd).run();
po::store(parsed, vm);
po::notify(vm);
} catch (const boost::program_options::error &e) {
cout << e.what() << "\n";
cout << desc << "\n";
return 1;
}
if (vm.count("help")) {
cout << desc << "\n";
return 1;
}
if (vm.count("file") != 1) {
aare::logger::error("file is required");
cout << desc << "\n";
return 1;
}
if (vm.count("port") != 1) {
aare::logger::error("port is required");
cout << desc << "\n";
return 1;
}
std::string const path = vm["file"].as<string>();
uint16_t const port = vm["port"].as<uint16_t>();
bool const loop = vm.count("loop") == 1;
uint16_t const fps = vm["fps"].as<uint16_t>();
auto args = parser.parse(argc, argv);
std::string const path = args["file"];
uint16_t const port = std::stoi(args["port"]);
bool const loop = args["loop"] == "1";
uint16_t const fps = std::stoi(args["fps"]);
aare::logger::debug("ARGS: file:", path, "port:", port, "fps:", fps, "loop:", loop);
auto d = round<std::chrono::milliseconds>(std::chrono::duration<double>{1. / fps});
@@ -78,7 +48,7 @@ int main(int argc, char **argv) {
header.shape.row = frame.rows();
header.shape.col = frame.cols();
header.bitmode = frame.bitdepth();
header.size = frame.size();
header.size = frame.bytes();
sender.send({header, frame});
std::this_thread::sleep_for(d);