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https://github.com/slsdetectorgroup/aare.git
synced 2025-06-23 20:07:59 +02:00
merge from latest developer
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149
CMakeLists.txt
149
CMakeLists.txt
@ -1,16 +1,29 @@
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cmake_minimum_required(VERSION 3.14)
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cmake_minimum_required(VERSION 3.15)
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project(aare
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VERSION 1.0.0
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DESCRIPTION "Data processing library for PSI detectors"
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HOMEPAGE_URL "https://github.com/slsdetectorgroup/aare"
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LANGUAGES C CXX
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)
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# Read VERSION file into project version
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set(VERSION_FILE "${CMAKE_CURRENT_SOURCE_DIR}/VERSION")
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file(READ "${VERSION_FILE}" VERSION_CONTENT)
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string(STRIP "${VERSION_CONTENT}" PROJECT_VERSION_STRING)
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set(PROJECT_VERSION ${PROJECT_VERSION_STRING})
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set(CMAKE_CXX_STANDARD 17)
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set(CMAKE_CXX_STANDARD_REQUIRED ON)
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set(CMAKE_CXX_EXTENSIONS OFF)
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execute_process(
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COMMAND git log -1 --format=%h
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WORKING_DIRECTORY ${CMAKE_CURRENT_LIST_DIR}
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OUTPUT_VARIABLE GIT_HASH
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OUTPUT_STRIP_TRAILING_WHITESPACE
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)
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message(STATUS "Building from git hash: ${GIT_HASH}")
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if (${CMAKE_VERSION} VERSION_GREATER "3.24")
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cmake_policy(SET CMP0135 NEW) #Fetch content download timestamp
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endif()
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@ -31,7 +44,7 @@ set(CMAKE_MODULE_PATH "${CMAKE_CURRENT_SOURCE_DIR}/cmake" ${CMAKE_MODULE_PATH})
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# General options
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option(AARE_PYTHON_BINDINGS "Build python bindings" ON)
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option(AARE_PYTHON_BINDINGS "Build python bindings" OFF)
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option(AARE_TESTS "Build tests" OFF)
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option(AARE_BENCHMARKS "Build benchmarks" OFF)
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option(AARE_EXAMPLES "Build examples" OFF)
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@ -41,7 +54,7 @@ option(AARE_VERBOSE "Verbose output" OFF)
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option(AARE_CUSTOM_ASSERT "Use custom assert" OFF)
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option(AARE_INSTALL_PYTHONEXT "Install the python extension in the install tree under CMAKE_INSTALL_PREFIX/aare/" OFF)
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option(AARE_HDF5 "Hdf5 File Format" OFF)
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option(AARE_ASAN "Enable AddressSanitizer" OFF)
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# Configure which of the dependencies to use FetchContent for
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option(AARE_FETCH_FMT "Use FetchContent to download fmt" ON)
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@ -49,6 +62,7 @@ option(AARE_FETCH_PYBIND11 "Use FetchContent to download pybind11" ON)
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option(AARE_FETCH_CATCH "Use FetchContent to download catch2" ON)
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option(AARE_FETCH_JSON "Use FetchContent to download nlohmann::json" ON)
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option(AARE_FETCH_ZMQ "Use FetchContent to download libzmq" ON)
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option(AARE_FETCH_LMFIT "Use FetchContent to download lmfit" ON)
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#Convenience option to use system libraries only (no FetchContent)
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@ -60,10 +74,15 @@ if(AARE_SYSTEM_LIBRARIES)
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set(AARE_FETCH_CATCH OFF CACHE BOOL "Disabled FetchContent for catch2" FORCE)
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set(AARE_FETCH_JSON OFF CACHE BOOL "Disabled FetchContent for nlohmann::json" FORCE)
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set(AARE_FETCH_ZMQ OFF CACHE BOOL "Disabled FetchContent for libzmq" FORCE)
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# Still fetch lmfit when setting AARE_SYSTEM_LIBRARIES since this is not available
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# on conda-forge
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endif()
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if(AARE_VERBOSE)
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add_compile_definitions(AARE_VERBOSE)
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add_compile_definitions(AARE_LOG_LEVEL=aare::logDEBUG5)
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else()
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add_compile_definitions(AARE_LOG_LEVEL=aare::logERROR)
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endif()
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if(AARE_CUSTOM_ASSERT)
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@ -75,18 +94,70 @@ if(AARE_BENCHMARKS)
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endif()
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set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
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if(AARE_FETCH_LMFIT)
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#TODO! Should we fetch lmfit from the web or inlcude a tar.gz in the repo?
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set(LMFIT_PATCH_COMMAND git apply ${CMAKE_CURRENT_SOURCE_DIR}/patches/lmfit.patch)
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# For cmake < 3.28 we can't supply EXCLUDE_FROM_ALL to FetchContent_Declare
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# so we need this workaround
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if (${CMAKE_VERSION} VERSION_LESS "3.28")
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FetchContent_Declare(
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lmfit
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GIT_REPOSITORY https://jugit.fz-juelich.de/mlz/lmfit.git
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GIT_TAG main
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PATCH_COMMAND ${LMFIT_PATCH_COMMAND}
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UPDATE_DISCONNECTED 1
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)
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else()
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FetchContent_Declare(
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lmfit
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GIT_REPOSITORY https://jugit.fz-juelich.de/mlz/lmfit.git
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GIT_TAG main
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PATCH_COMMAND ${LMFIT_PATCH_COMMAND}
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UPDATE_DISCONNECTED 1
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EXCLUDE_FROM_ALL 1
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)
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endif()
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#Disable what we don't need from lmfit
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set(BUILD_TESTING OFF CACHE BOOL "")
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set(LMFIT_CPPTEST OFF CACHE BOOL "")
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set(LIB_MAN OFF CACHE BOOL "")
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set(LMFIT_CPPTEST OFF CACHE BOOL "")
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set(BUILD_SHARED_LIBS OFF CACHE BOOL "")
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if (${CMAKE_VERSION} VERSION_LESS "3.28")
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if(NOT lmfit_POPULATED)
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FetchContent_Populate(lmfit)
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add_subdirectory(${lmfit_SOURCE_DIR} ${lmfit_BINARY_DIR} EXCLUDE_FROM_ALL)
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endif()
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else()
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FetchContent_MakeAvailable(lmfit)
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endif()
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set_property(TARGET lmfit PROPERTY POSITION_INDEPENDENT_CODE ON)
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else()
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find_package(lmfit REQUIRED)
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endif()
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if(AARE_FETCH_ZMQ)
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# Fetchcontent_Declare is deprecated need to find a way to update this
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# for now setting the policy to old is enough
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if (${CMAKE_VERSION} VERSION_GREATER_EQUAL "3.30")
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cmake_policy(SET CMP0169 OLD)
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endif()
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set(ZMQ_PATCH_COMMAND git apply ${CMAKE_CURRENT_SOURCE_DIR}/patches/libzmq_cmake_version.patch)
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FetchContent_Declare(
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libzmq
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GIT_REPOSITORY https://github.com/zeromq/libzmq.git
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GIT_TAG v4.3.4
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PATCH_COMMAND ${ZMQ_PATCH_COMMAND}
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UPDATE_DISCONNECTED 1
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)
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# Disable unwanted options from libzmq
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set(BUILD_TESTS OFF CACHE BOOL "Switch off libzmq test build")
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@ -128,8 +199,8 @@ if (AARE_FETCH_FMT)
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LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
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ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
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RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR}
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INCLUDES DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}
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)
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INCLUDES DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}
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)
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else()
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find_package(fmt 6 REQUIRED)
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endif()
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@ -147,7 +218,6 @@ if (AARE_FETCH_JSON)
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install(
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TARGETS nlohmann_json
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EXPORT "${TARGETS_EXPORT_NAME}"
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)
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message(STATUS "target: ${NLOHMANN_JSON_TARGET_NAME}")
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else()
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@ -226,13 +296,6 @@ if(CMAKE_BUILD_TYPE STREQUAL "Release")
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target_compile_options(aare_compiler_flags INTERFACE -O3)
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else()
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message(STATUS "Debug build")
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target_compile_options(
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aare_compiler_flags
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INTERFACE
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-Og
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-ggdb3
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)
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endif()
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# Common flags for GCC and Clang
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@ -257,7 +320,21 @@ target_compile_options(
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endif() #GCC/Clang specific
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if(AARE_ASAN)
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message(STATUS "AddressSanitizer enabled")
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target_compile_options(
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aare_compiler_flags
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INTERFACE
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-fsanitize=address,undefined,pointer-compare
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-fno-omit-frame-pointer
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)
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target_link_libraries(
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aare_compiler_flags
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INTERFACE
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-fsanitize=address,undefined,pointer-compare
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-fno-omit-frame-pointer
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)
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endif()
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@ -273,14 +350,23 @@ endif()
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set(PUBLICHEADERS
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include/aare/ArrayExpr.hpp
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include/aare/CalculateEta.hpp
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include/aare/Cluster.hpp
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include/aare/ClusterFinder.hpp
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include/aare/ClusterFile.hpp
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include/aare/CtbRawFile.hpp
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include/aare/ClusterVector.hpp
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include/aare/decode.hpp
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include/aare/defs.hpp
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include/aare/Dtype.hpp
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include/aare/File.hpp
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include/aare/Fit.hpp
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include/aare/FileInterface.hpp
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include/aare/FilePtr.hpp
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include/aare/Frame.hpp
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include/aare/GainMap.hpp
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include/aare/geo_helpers.hpp
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include/aare/JungfrauDataFile.hpp
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include/aare/NDArray.hpp
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include/aare/NDView.hpp
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include/aare/NumpyFile.hpp
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@ -291,23 +377,30 @@ set(PUBLICHEADERS
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include/aare/RawMasterFile.hpp
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include/aare/RawSubFile.hpp
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include/aare/VarClusterFinder.hpp
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include/aare/utils/task.hpp
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)
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set(SourceFiles
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${CMAKE_CURRENT_SOURCE_DIR}/src/CtbRawFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/ClusterFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/defs.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Dtype.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/decode.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Frame.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/File.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/FilePtr.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Fit.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/geo_helpers.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/JungfrauDataFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/NumpyFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/NumpyHelpers.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Interpolator.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/PixelMap.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/RawFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/RawSubFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/RawMasterFile.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/utils/task.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/utils/ifstream_helpers.cpp
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)
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# HDF5
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@ -329,9 +422,12 @@ endif (AARE_HDF5)
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add_library(aare_core STATIC ${SourceFiles})
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target_include_directories(aare_core PUBLIC
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"$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>"
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"$<INSTALL_INTERFACE:${CMAKE_INSTALL_INCLUDEDIR}>"
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"$<INSTALL_INTERFACE:${CMAKE_INSTALL_INCLUDEDIR}>"
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)
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set(THREADS_PREFER_PTHREAD_FLAG ON)
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find_package(Threads REQUIRED)
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target_link_libraries(
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aare_core
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PUBLIC
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@ -340,6 +436,9 @@ target_link_libraries(
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${STD_FS_LIB} # from helpers.cmake
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PRIVATE
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aare_compiler_flags
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Threads::Threads
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$<BUILD_INTERFACE:lmfit>
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)
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if (AARE_HDF5 AND HDF5_FOUND)
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@ -363,17 +462,29 @@ endif()
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if(AARE_TESTS)
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set(TestSources
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${CMAKE_CURRENT_SOURCE_DIR}/src/algorithm.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/defs.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/decode.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Dtype.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Frame.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/geo_helpers.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/RawMasterFile.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/NDArray.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/NDView.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/ClusterFinder.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/ClusterVector.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Cluster.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/CalculateEta.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/ClusterFile.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/ClusterFinderMT.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/Pedestal.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/JungfrauDataFile.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/NumpyFile.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/NumpyHelpers.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/RawFile.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/RawSubFile.test.cpp
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${CMAKE_CURRENT_SOURCE_DIR}/src/utils/task.test.cpp
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)
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if(HDF5_FOUND)
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list (APPEND TestSources
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@ -457,4 +568,4 @@ if(AARE_MASTER_PROJECT)
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set(CMAKE_INSTALL_DIR "share/cmake/${PROJECT_NAME}")
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set(PROJECT_LIBRARIES aare-core aare-compiler-flags )
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include(cmake/package_config.cmake)
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endif()
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endif()
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