fix ci and add formatting (#48)

* add dependency

* dont run blocking zmq example and add formatting

* format files

examples/json_example.cpp

@@ -8,7 +8,7 @@
 using aare::File;
 using aare::Frame;
 
-void test(File& f, int frame_number) {
+void test(File &f, int frame_number) {
     std::cout << "frame number: " << frame_number << std::endl;
     Frame frame = f.iread(frame_number);
     std::cout << *((uint16_t *)frame.get(0, 0)) << std::endl;

examples/logger_example.cpp

@@ -1,6 +1,6 @@
 #include "aare/utils/logger.hpp"
-#include <iostream>
 #include <fstream>
+#include <iostream>
 
 int main() {
     aare::logger::debug(LOCATION, "hello", 1, "world", std::vector<long>{1, 2, 3, 4, 5});
@@ -9,15 +9,12 @@ int main() {
     aare::logger::debug(LOCATION, "NOTHING SHOULD BE PRINTED");
     aare::logger::info(LOCATION, "info printed");
 
-
     // writing to file
     std::ofstream textfile;
     textfile.open("Test.txt");
     aare::logger::set_streams(textfile.rdbuf());
     aare::logger::info(LOCATION, "info printed to file");
 
-
-
     // writing with a local logger instance
     aare::logger::Logger logger;
     logger.set_verbosity(aare::logger::WARNING);
@@ -27,7 +24,6 @@ int main() {
     aare::logger::info(LOCATION, "info printed in file ##");
     textfile.close();
 
-
     // setting file output by path
     // user doesn't have to close file
     aare::logger::set_output_file("Test2.txt");

examples/multiport_example.cpp

@@ -2,7 +2,6 @@
 #include "aare/File.hpp"
 #include "aare/utils/logger.hpp"
 #include <iostream>
-#include <iostream>
 
 #define AARE_ROOT_DIR_VAR "PROJECT_ROOT_DIR"
 

examples/numpy_read_example.cpp

@@ -7,7 +7,7 @@
 using aare::File;
 using aare::Frame;
 
-void test(File& f, int frame_number) {
+void test(File &f, int frame_number) {
     std::cout << "frame number: " << frame_number << std::endl;
     Frame frame = f.iread(frame_number);
     std::cout << *((uint16_t *)frame.get(0, 0)) << std::endl;
@@ -22,7 +22,7 @@ int main() {
     std::filesystem::path fpath(PROJECT_ROOT_DIR / "data" / "numpy" / "test_numpy_file.npy");
     std::cout << fpath << std::endl;
 
-    File file(fpath,"r");
+    File file(fpath, "r");
     test(file, 0);
     test(file, 2);
     test(file, 24);

examples/numpy_write_example.cpp

@@ -9,23 +9,19 @@ using aare::File;
 using aare::FileConfig;
 using aare::Frame;
 
-
 int main() {
     auto path = std::filesystem::path("/tmp/test.npy");
     auto dtype = aare::DType(typeid(uint32_t));
     FileConfig cfg = {path, dtype, 100, 100};
-    File npy(path, "w",cfg);
+    File npy(path, "w", cfg);
     Frame f(100, 100, dtype.bitdepth());
     for (int i = 0; i < 10000; i++) {
-        f.set<uint32_t>(i/100, i%100,i);
+        f.set<uint32_t>(i / 100, i % 100, i);
     }
 
     npy.write(f);
-    f.set<uint32_t>(0,0,77);
+    f.set<uint32_t>(0, 0, 77);
     npy.write(f);
     npy.write(f);
     return 0;
-    
-
-
 }

examples/raw_example.cpp

@@ -1,14 +1,14 @@
 // Your First C++ Program
 #include "aare/File.hpp"
-#include <iostream>
 #include "aare/utils/logger.hpp"
+#include <iostream>
 
 #define AARE_ROOT_DIR_VAR "PROJECT_ROOT_DIR"
 
 using aare::File;
 using aare::Frame;
 
-void test(File& f, int frame_number) {
+void test(File &f, int frame_number) {
     std::cout << "frame number: " << frame_number << std::endl;
     Frame frame = f.iread(frame_number);
     std::cout << *((uint16_t *)frame.get(0, 0)) << std::endl;
@@ -21,7 +21,8 @@ int main() {
     if (PROJECT_ROOT_DIR.empty()) {
         throw std::runtime_error("environment variable PROJECT_ROOT_DIR is not set");
     }
-    std::filesystem::path fpath(PROJECT_ROOT_DIR / "data" /"moench"/ "moench04_noise_200V_sto_both_100us_no_light_thresh_900_master_0.raw");
+    std::filesystem::path fpath(PROJECT_ROOT_DIR / "data" / "moench" /
+                                "moench04_noise_200V_sto_both_100us_no_light_thresh_900_master_0.raw");
     File file(fpath, "r");
     test(file, 0);
     test(file, 2);

examples/zmq_example.cpp

@@ -1,18 +1,15 @@
-#include <string>
-#include <fmt/core.h>
 #include "aare/ZmqSocket.hpp"
+#include <fmt/core.h>
+#include <string>
 
-
-
-int main(){
+int main() {
     std::string endpoint = "tcp://localhost:5555";
     aare::ZmqSocket socket(endpoint);
     socket.connect();
-    char* data = new char[1024*1024*10];
+    char *data = new char[1024 * 1024 * 10];
     aare::zmqHeader header;
-    while(true){
-        int rc = socket.receive(header, reinterpret_cast<std::byte*>(data));
-
+    while (true) {
+        int rc = socket.receive(header, reinterpret_cast<std::byte *>(data));
     }
     delete[] data;
     return 0;