#!/bin/bash

if [[ "$0" == *"filename_creator.sh"* ]]; then
    echo "script changes env. variables: should be invoked with source, not sh "    
    exit
    
fi

echo "Run pccalib.sh [pc_name] to set the DST ip address before running the filename creator"
echo $0
echo "printing filenames for module " $1



#define folder structure
parentdir="/mnt/sls_det_storage/jungfrau_calib/"
calib_relativedir="data/Module_"$1"_Calib/"
ana_relativedir="ana/M"$1"_CalibAna/"
calibdatafolder=$parentdir$calib_relativedir
anadatafolder=$parentdir$ana_relativedir
#datafolder="/mnt/sls_det_storage/jungfrau_calib/data/Module_"$1"_Calib/"
datestring=$(date +%F)
echo "Relative calib directory is "$calib_relativedir
echo "Relative analysis results directory is "$ana_relativedir
echo "mkdir "$calibdatafolder "if not already existing."
mkdir -p $calibdatafolder 

#Rcv="./slsDetector_bin_8_0_2_RHEL7/ju_udp_receiver_3threads_2_0 S " #mpc2012 RHEL7
Rcv="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S " #pc-jungfrau-02 RHEL8

export TKBPG0=$Rcv$calibdatafolder"BP_M"$1"_"$datestring"_ "$DSTIP 
#export TKBPG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"BP_M"$1"_"$datestring"_ 10.1.1.106"

export TKBPHG0=$Rcv$calibdatafolder"BP_M"$1"_"$datestring"_HGOG1G2_ "$DSTIP  
#export TKBPHG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"BP_M"$1"_"$datestring"_HGOG1G2_ 10.1.1.106" 

export TKCSHG0=$Rcv$calibdatafolder"CS_M"$1"_"$datestring"_HGOG1G2_ "$DSTIP                                                                              
#export TKCSHG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"CS_M"$1"_"$datestring"_HGOG1G2_ 10.1.1.106"

export TKCSG0=$Rcv$calibdatafolder"CS_M"$1"_"$datestring"_ $DSTIP"
#export TKCSG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"CS_M"$1"_"$datestring"_ 10.1.1.106"


echo "exporting the fluorescence receiver commands "

export TKFG0=$Rcv$calibdatafolder"CuFluoG0_M"$1"_"$datestring"_ "$DSTIP
#export TKFG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"CuFluoG0_M"$1"_"$datestring"_ 10.1.1.106"

export TKFHG0=$Rcv$calibdatafolder"CuFluoHG0_M"$1"_"$datestring"_ "$DSTIP
#export TKFHG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"CuFluoHG0_M"$1"_"$datestring"_ 10.1.1.106"

export TKPG0=$Rcv$calibdatafolder"pedeG0_M"$1"_"$datestring"_ "$DSTIP
#export TKPG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"pedeG0_M"$1"_"$datestring"_ 10.1.1.106"

export TKPHG0=$Rcv$calibdatafolder"pedeHG0_M"$1"_"$datestring"_ "$DSTIP
#export TKPHG0="./slsDetector_bin/ju_udp_receiver_3threads_2_0 S "$calibdatafolder"pedeHG0_M"$1"_"$datestring"_ 10.1.1.106"


echo "printing the analysis commands " 
for file in $(find $calibdatafolder -type f -exec basename {} \; | grep 000000 ); do 
    prefix=${file%_000000.dat}
    echo $prefix ; 
    if [[ $prefix == *"BP"* ]]; then

	    bpfile=$prefix
  
    fi
     if [[ $prefix == *"CS"* ]]; then

	   	csfile=$prefix 

    fi
    if [[ $prefix == *"oG0"* ]]; then

	   cgofile=$prefix

    fi 
    if [[ $prefix == *"eG0"* ]]; then

	   pgofile=$prefix

    fi 
    if [[ $prefix == *"oHG0"* ]]; then

	   chgofile=$prefix

    fi 
    if [[ $prefix == *"eHG0"* ]]; then

	   phgofile=$prefix

    fi 

#    echo "ss"
done
echo "----------------------------------------------------------------------"
echo "---------------------START OF ANALYSIS CLI commands --------------------"
echo "----------------------------------------------------------------------"
echo "M"$1
echo "./BP_analysis "$1" "$calibdatafolder$bpfile" "$anadatafolder 
echo "./CS_analysis "$1" "$calibdatafolder" "$csfile" "$anadatafolder
echo "./CuFluo_analysis "$1" G0 "$calibdatafolder $pgofile $cgofile $anadatafolder
echo "./CuFluo_analysis "$1" HG0 "$calibdatafolder $phgofile $chgofile $anadatafolder
echo "./JFMC_CalibWriter_wBP" "$1"
echo " "
echo "----------------------------------------------------------------------"
echo "---------------------END OF ANALYSIS CLI commands --------------------"
echo "----------------------------------------------------------------------"


echo "creating the output folders?   Y for yes "
if [ ! -v $2 ]; then
 input=$2
 echo $input
else
 read -n 1 -s input
 echo $input
fi

if [[ $input = "Y" ]]; then 
    echo "creating the output folders."
    plotbasefolder="/afs/psi.ch/project/mythen/sophie/JFCalibration/plots/M"$1
    mkdir -v $plotbasefolder
    mkdir -v $plotbasefolder"/BackplanePulsing"
#    mkdir -v $plotbasefolder"/Calib_"$datestring #done by/JFMC_CalibWrite 
    mkdir -v $plotbasefolder"/CuFluo"
    mkdir -v $plotbasefolder"/CuFluo/G0"
    mkdir -v $plotbasefolder"/CuFluo/HG0"
    mkdir -v $plotbasefolder"/CurrentSource"
    outdatabasefolder="/afs/psi.ch/project/mythen/sophie/JFCalibration/data/M"$1
    mkdir -v $outdatabasefolder
    echo "Output folders created"
  
else
    echo "Exiting script"
 
fi