from __future__ import division, print_function, absolute_import import numpy as np import torch as t from CDTools.tools import cmath def centroid(im, dims=2): """Returns the centroid of an image or a stack of images By default, the last two dimensions are used in the calculation and the remainder of the dimensions are passed through. Beware that the meaning of the centroid is not well defined if your image contains values less than 0 Args: im (t.Tensor) : An image or stack of images to calculate from dims (int) : Default 2, how many trailing dimensions to calculate for Returns: t.Tensor : An (i,j) index or stack of indices """ indices = (t.arange(im.shape[-dims+i]).to(t.float32) for i in range(dims)) indices = t.meshgrid(*indices) use_dims = [-dims+i for i in range(dims)] divisor = t.sum(im, dim=use_dims) centroids = [t.sum(index * im, dim=use_dims) / divisor for index in indices] return t.stack(centroids,dim=-1) def centroid_sq(im, dims=2, comp=False): """Returns the centroid of the square of an image or stack of images By default, the last two dimensions are used in the calculation and the remainder of the dimensions are passed through. If the "comp" flag is set, it will be assumed that the last dimension represents the real and imaginary part of a complex number, and the centroid will be calculated for the magnitude squared of those numbers Args: im (t.Tensor) : An image or stack of images to calculate from dims (int) : Default 2, how many trailing dimensions to calculate for comp (bool) : Default is False, whether the data represents complex numbers Returns: t.Tensor : An (i,j) index or stack of indices """ if comp: im_sq = cmath.cabssq(im) else: im_sq = im**2 return centroid(im_sq, dims=dims)