Commit Graph
18 Commits
Author SHA1 Message Date
Abe Levitan f84e441843 Standardize the way that data is copied when models are created 2021-08-05 16:21:58 -04:00
Abe Levitan 53cd966c33 Update the RPI model and clean up the examples section 2021-07-06 13:58:00 -04:00
Abe Levitan 8ddcc7683f Start cleaning up the repo and tidying up the example scripts 2021-06-28 11:14:41 -04:00
Abe Levitan 76e6d5efae get tests working 2021-06-21 16:55:34 -04:00
Abe Levitan 188a685503 Fix a bug in multislice where it doesn't work when prevent_alias is set to True 2021-06-02 14:48:57 -04:00
Abe Levitan 2854a872ee Make a program to visualize the shot to shot fluctuations when using the unified mode model 2021-04-08 16:28:24 -04:00
Abe Levitan 2774953c2a Fix a bug in the incoherent probe mode update 2021-03-15 18:55:05 -04:00
Abe Levitan f6f8084978 Added unified modes to multislice, added units to fancy_ptycho, and added more sane normalization option (for reconstructions) to unified mode models 2021-03-11 17:01:55 -05:00
Abe Levitan 6b7a0701a6 Update plotting functions to deal better with images that have multiple layers 2021-02-26 15:31:51 -05:00
Abe Levitan d664bf351b Remove the original, worse unified mode model, and update the plotting functions to handle stacks of images, very helpful for multislice and also multi-mode models 2021-02-04 18:55:55 -05:00
Abe Levitan fdca857046 make some tweaks to how the multislice works 2021-01-30 09:22:15 -05:00
Abe Levitan 043751a8b6 Speed up the multislice model 5x, but probably break lots of other models doing it, so remember to clean upgit status 2021-01-27 22:33:45 -05:00
Abe Levitan 0dec5aa9fd Intermediate state in optimization, improved the round interaction but not sinc yet 2021-01-27 20:27:31 -05:00
Abe Levitan e265c85d6b Touching in before I shred everything to improve efficiency 2021-01-27 19:27:21 -05:00
Abe Levitan a536e3bdb4 Maybe last time it didn't actually commit? 2021-01-25 13:38:38 -05:00
Abe Levitan 6b735a431f Clean up namespaces and also add a test of RPI with incoherent probes 2020-12-28 21:32:18 -05:00
Abe Levitan 75011eaccf Make tweaks to the tilt correction to work with the grazing reflection data, add basic atom-modeling for electron ptychography, and update the multislice ptycho to include a bandlimit to avoid aliasing 2020-12-21 12:22:04 -05:00
Abe Levitan aea0ff9bf8 Write a multislice and s_matrix ptychography program 2020-10-28 13:55:04 -04:00