 Anastasiia Kutakh
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e7c15273fa
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2021-08-24 11:31:35 -04:00 |
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Anastasiia Kutakh
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d0bca7633b
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2021-08-24 01:26:11 -04:00 |
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Anastasiia Kutakh
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aadd720f1e
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2021-08-20 23:46:24 -04:00 |
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Anastasiia Kutakh
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53742d0245
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2021-08-20 21:45:27 -04:00 |
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Anastasiia Kutakh
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8493a3fb41
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2021-08-20 17:19:28 -04:00 |
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Anastasiia Kutakh
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540cc997b5
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2021-08-20 11:52:23 -04:00 |
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Abe Levitan
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998245ae4a
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'.'
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2021-08-13 14:17:12 -04:00 |
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Anastasiia Kutakh
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7daabf8409
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2021-08-10 15:29:33 -04:00 |
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Abe Levitan
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f84e441843
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Standardize the way that data is copied when models are created
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2021-08-05 16:21:58 -04:00 |
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Abe Levitan
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faceb139d3
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Add a function to save out the currently open plots
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2021-08-05 14:39:53 -04:00 |
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Abe Levitan
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3e6072acb7
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Finally remove the scourge of from __future__ import ... and remove any lingering suggestion that this code is python 2 compatible
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2021-08-05 11:08:13 -04:00 |
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Anastasiia Kutakh
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daeac7e983
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2021-08-04 09:39:49 -04:00 |
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Anastasiia Kutakh
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9f580102ba
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2021-08-04 00:09:54 -04:00 |
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Anastasiia Kutakh
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35c1643721
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2021-08-04 00:04:29 -04:00 |
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Anastasiia Kutakh
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bf4db86ad4
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2021-08-03 23:59:23 -04:00 |
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Anastasiia Kutakh
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21036f625a
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2021-08-03 23:52:19 -04:00 |
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Anastasiia Kutakh
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8c22c99d66
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2021-08-03 13:57:25 -04:00 |
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Anastasiia Kutakh
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709c3f398d
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2021-07-31 21:33:14 -04:00 |
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Anastasiia Kutakh
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026f1c2b0b
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2021-07-31 21:26:26 -04:00 |
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Anastasiia Kutakh
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070622a9e1
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2021-07-30 00:32:23 -04:00 |
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Anastasiia Kutakh
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6924ce58fe
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changed polarization and polarized_fancy_ptycho interaction
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2021-07-29 02:59:37 -04:00 |
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Abe Levitan
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a4d70bc375
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Update polarized_fancy_ptycho.py
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2021-07-28 17:14:41 -04:00 |
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Abe Levitan
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a3e9ebebf5
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Some small notes in the code
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2021-07-28 17:05:55 -04:00 |
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Abe Levitan
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3a68fd35b2
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Add the required import statements
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2021-07-28 15:38:33 -04:00 |
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Anastasiia Kutakh
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d067dcac9d
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not tested/debugged yet
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2021-07-28 07:04:22 -04:00 |
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Abe Levitan
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53cd966c33
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Update the RPI model and clean up the examples section
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2021-07-06 13:58:00 -04:00 |
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Abe Levitan
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8ddcc7683f
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Start cleaning up the repo and tidying up the example scripts
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2021-06-28 11:14:41 -04:00 |
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Abe Levitan
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76e6d5efae
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get tests working
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2021-06-21 16:55:34 -04:00 |
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Abe Levitan
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a3765e9097
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remove all reference to cmath, get code and tests to the point where they run at least.
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2021-06-17 16:47:24 -04:00 |
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Abe Levitan
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188a685503
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Fix a bug in multislice where it doesn't work when prevent_alias is set to True
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2021-06-02 14:48:57 -04:00 |
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Abe Levitan
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2854a872ee
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Make a program to visualize the shot to shot fluctuations when using the unified mode model
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2021-04-08 16:28:24 -04:00 |
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Abe Levitan
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2774953c2a
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Fix a bug in the incoherent probe mode update
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2021-03-15 18:55:05 -04:00 |
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Abe Levitan
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f6f8084978
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Added unified modes to multislice, added units to fancy_ptycho, and added more sane normalization option (for reconstructions) to unified mode models
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2021-03-11 17:01:55 -05:00 |
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Abe Levitan
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6b7a0701a6
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Update plotting functions to deal better with images that have multiple layers
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2021-02-26 15:31:51 -05:00 |
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Abe Levitan
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cea860bdf9
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Fix an issue with unified_mode_ptycho not working in model.compare, and fix colorbars for model.compare
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2021-02-05 12:30:29 -05:00 |
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Abe Levitan
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d664bf351b
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Remove the original, worse unified mode model, and update the plotting functions to handle stacks of images, very helpful for multislice and also multi-mode models
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2021-02-04 18:55:55 -05:00 |
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Abe Levitan
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fdca857046
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make some tweaks to how the multislice works
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2021-01-30 09:22:15 -05:00 |
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Abe Levitan
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043751a8b6
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Speed up the multislice model 5x, but probably break lots of other models doing it, so remember to clean upgit status
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2021-01-27 22:33:45 -05:00 |
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Abe Levitan
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0dec5aa9fd
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Intermediate state in optimization, improved the round interaction but not sinc yet
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2021-01-27 20:27:31 -05:00 |
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Abe Levitan
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e265c85d6b
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Touching in before I shred everything to improve efficiency
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2021-01-27 19:27:21 -05:00 |
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Abe Levitan
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3acd1ece3c
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Make it so it doesn't require a crazy amount of memory
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2021-01-26 22:46:15 -05:00 |
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Abe Levitan
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a536e3bdb4
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Maybe last time it didn't actually commit?
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2021-01-25 13:38:38 -05:00 |
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Abe Levitan
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6b735a431f
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Clean up namespaces and also add a test of RPI with incoherent probes
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2020-12-28 21:32:18 -05:00 |
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Abe Levitan
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4be2af8609
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Finally finally finally add an RPI model. Makes it soooo much easier...
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2020-12-22 14:12:51 -05:00 |
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Abe Levitan
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75011eaccf
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Make tweaks to the tilt correction to work with the grazing reflection data, add basic atom-modeling for electron ptychography, and update the multislice ptycho to include a bandlimit to avoid aliasing
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2020-12-21 12:22:04 -05:00 |
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Abe Levitan
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38345da454
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Update S matrix ptychography and also update the S matrix interaction function to use a more interpretable definition of the S matrix
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2020-10-30 14:52:17 -04:00 |
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Abe Levitan
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aea0ff9bf8
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Write a multislice and s_matrix ptychography program
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2020-10-28 13:55:04 -04:00 |
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Abe Levitan
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31cc45da70
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One more try to fix the off axis near field propagation
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2020-05-04 16:53:50 -04:00 |
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Abe Levitan
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19f61ab946
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Add option for propagation vector separate from offset vector
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2020-04-29 17:55:00 -04:00 |
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Abe Levitan
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a5b2337293
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Further develop the 2D Bragg ptychography code and edit some tests to work with a newer version of h5py
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2020-04-29 13:50:13 -04:00 |
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