allevitan
d8fade9f32
Update the amplitude MSE and intensity MSE loss to act equivalently - currently, the intensity MSE loss was by default a mean, but amplitude was by default a sum. Both functions now have a flag, use_sum=False, which is False by default. This changes the default behavior of amplitude_mse. All models, including the tutorial version of simple_ptycho, are updated accordingly and test coverage was added.
2026-04-13 14:34:23 +02:00
allevitan and Claude Sonnet 4.6
fd17ae30ba
Update tutorial to use loss instance attribute pattern
...
Updates tutorial_simple_ptycho.py to match simple_ptycho.py: removes
the def loss() method and instead assigns self.loss and
self.loss_normalizer as instance attributes in __init__.
Updates tutorial.rst accordingly: adds the loss assignment to the
__init__ code block with an explanation, and removes def loss() from
the forward model section.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-03 18:44:04 +02:00
Abe Levitan
3f028e2fbf
Merge pull request #72 from cdtools-developers/feature/betterplots
...
A bunch of long overdue updates to the plotting system
2026-04-03 18:23:41 +02:00
allevitan
05bdee3861
Update the docs so it doesn't always think it's v0.2.0
2026-04-03 15:24:50 +02:00
allevitan
0bd8df498c
Updated the documentation to reflect the changes to the plotting system
2026-03-24 21:39:04 +01:00
gnzng
444b56b829
docs: update installation instructions for dependencies to include pip
2025-11-16 11:21:36 -06:00
gnzng
4d18171e59
docs: add instructions for building custom documentation
2025-11-16 11:00:33 -06:00
gnzng
11ed3df35e
ending python 3.8 support, adding python 3.14 to automatic test
2025-11-11 14:33:55 -06:00
gnzng
728cf9d590
update readme and installation docs
2025-11-10 12:23:25 -08:00
levita_a
8328b852d3
Update the docs to include the reconstructors class and discuss their use in the examples
2025-10-16 14:43:04 +02:00
levita_a
ab30afb10e
Update the documentation to reflect the existence of a PyPI package
2025-07-02 15:04:39 +02:00
gnzng
e1b76f0959
DOCS: Force-Push due to rebasing unnecessary large commits to just add an extra doc publishing action
2025-03-03 10:11:20 -08:00
Damian Guenzing
b39cd2b705
updated installation.rst for pip installation
2025-02-26 15:24:29 +00:00
levita_a
2f16c43a11
Add an MIT license to the repo to prep for open release
2024-10-10 17:26:28 +02:00
levita_a
1052d5bcb6
Move documentation to the new organization
2024-09-02 14:23:59 +02:00
Abe Levitan
13a2ba86df
Make big changes to docs to update the tutorial section, and also to finally autoload the documentation of the models and datasets
2024-09-01 13:04:28 +02:00
levita_a
7b2509cfe1
remove useless old examples, and update the examples and docs to be useful for the current version
2024-02-26 17:56:19 +01:00
levita_a
d7c7e8f396
start getting the docs back up to date
2024-02-23 16:54:48 +01:00
levita_a
a9e0157707
Get tests to past and removeopt_for_fft
2023-12-01 15:58:18 +01:00
Abe Levitan
9f341fb4bd
update the requirements files and fix a bug that prevented install when not in developer mode
2023-01-13 11:59:07 -08:00
Abe Levitan
858d8f3b2a
Make edits to the docs to handle the lowercaseness of cdtools now
2022-06-08 13:30:49 -07:00
Abe Levitan
b8500bd5a8
renaming
2022-06-08 13:12:50 -07:00
Abe Levitan
442fa2c71f
move to a src directory layout
2022-06-08 12:09:03 -07:00
Abe Levitan
3e72243a50
Update the docs a bit
2021-07-06 14:55:29 -04:00
Abe Levitan
53cd966c33
Update the RPI model and clean up the examples section
2021-07-06 13:58:00 -04:00
Abe Levitan
8ddcc7683f
Start cleaning up the repo and tidying up the example scripts
2021-06-28 11:14:41 -04:00
Abraham Levitan
59f6d58ea6
Fix typo in tutorial
2020-04-07 10:08:27 -04:00
Abraham Levitan
abdd0d6e1e
Update docs so that they can produce a latex/pdf version as well
2019-12-16 12:40:41 -05:00
Abraham Levitan
f78a39daf5
add the test for simple_ptycho_model'
2019-10-07 15:44:17 -04:00
Abe Levitan
120e23ef15
Write the model and dataset tutorials, update the dependencies, and various small bug fixes
2019-10-04 16:53:22 -04:00
Abe Levitan
69be77cc09
Update installation instructions for simplicity and also fix the tests to reflect new usage
2019-10-02 15:56:48 -04:00
Abe Levitan
185fde27a0
More work on documentation
2019-09-11 17:56:54 -04:00
Abe Levitan
40998908f1
refactor datasets, wrote more docs, added one more test dataset
2019-09-09 14:16:42 -04:00
Abe Levitan
99d02f95cf
Finish fleshing out the examples
2019-09-04 18:23:34 -04:00
Abe Levitan
5b521da557
Add the publishing script so we can publish the docs to github pages on the enterprise server
2019-09-04 16:37:30 -04:00
Abe Levitan
e80bf05f25
Further improve docs layout and add unfinished ptycho models to repo
2019-09-04 16:27:55 -04:00
Abe Levitan
de186592cb
Update the docstrings on all the tools files and start laying out the docs for real
2019-09-03 18:49:45 -04:00
Abe Levitan
d2c07bf1ac
Add a tool to look at raw data
2019-08-15 12:16:43 -04:00
allevitan
levita_a