 Abe Levitan
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043751a8b6
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Speed up the multislice model 5x, but probably break lots of other models doing it, so remember to clean upgit status
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2021-01-27 22:33:45 -05:00 |
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Abe Levitan
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0dec5aa9fd
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Intermediate state in optimization, improved the round interaction but not sinc yet
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2021-01-27 20:27:31 -05:00 |
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Abe Levitan
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e265c85d6b
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Touching in before I shred everything to improve efficiency
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2021-01-27 19:27:21 -05:00 |
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Abe Levitan
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3acd1ece3c
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Make it so it doesn't require a crazy amount of memory
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2021-01-26 22:46:15 -05:00 |
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Abe Levitan
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a536e3bdb4
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Maybe last time it didn't actually commit?
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2021-01-25 13:38:38 -05:00 |
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Abe Levitan
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6b735a431f
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Clean up namespaces and also add a test of RPI with incoherent probes
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2020-12-28 21:32:18 -05:00 |
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Abe Levitan
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4be2af8609
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Finally finally finally add an RPI model. Makes it soooo much easier...
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2020-12-22 14:12:51 -05:00 |
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Abe Levitan
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75011eaccf
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Make tweaks to the tilt correction to work with the grazing reflection data, add basic atom-modeling for electron ptychography, and update the multislice ptycho to include a bandlimit to avoid aliasing
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2020-12-21 12:22:04 -05:00 |
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Abe Levitan
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38345da454
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Update S matrix ptychography and also update the S matrix interaction function to use a more interpretable definition of the S matrix
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2020-10-30 14:52:17 -04:00 |
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Abe Levitan
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aea0ff9bf8
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Write a multislice and s_matrix ptychography program
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2020-10-28 13:55:04 -04:00 |
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Abe Levitan
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31cc45da70
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One more try to fix the off axis near field propagation
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2020-05-04 16:53:50 -04:00 |
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Abe Levitan
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19f61ab946
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Add option for propagation vector separate from offset vector
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2020-04-29 17:55:00 -04:00 |
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Abe Levitan
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a5b2337293
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Further develop the 2D Bragg ptychography code and edit some tests to work with a newer version of h5py
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2020-04-29 13:50:13 -04:00 |
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Abe Levitan
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fbbecbd04c
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First work on the off-axis propagator
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2020-04-23 14:32:19 -04:00 |
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Abe Levitan
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8d589eef86
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2020-01-25 19:01:11 -05:00 |
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Abe Levitan
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a1cca0dcea
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misc updates
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2020-01-25 19:01:03 -05:00 |
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David Rower
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7a243842b9
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Fixing wrong theta convention in converter; fixing simple_ptycho bug in dictionary syntax
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2020-01-23 17:20:25 -05:00 |
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Abe Levitan
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120e23ef15
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Write the model and dataset tutorials, update the dependencies, and various small bug fixes
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2019-10-04 16:53:22 -04:00 |
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Abe Levitan
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f58f3cc2c5
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misc small changes
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2019-10-02 13:27:32 -04:00 |
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Abe Levitan
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185fde27a0
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More work on documentation
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2019-09-11 17:56:54 -04:00 |
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Abe Levitan
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40998908f1
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refactor datasets, wrote more docs, added one more test dataset
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2019-09-09 14:16:42 -04:00 |
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Abe Levitan
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e80bf05f25
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Further improve docs layout and add unfinished ptycho models to repo
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2019-09-04 16:27:55 -04:00 |
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Abe Levitan
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de186592cb
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Update the docstrings on all the tools files and start laying out the docs for real
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2019-09-03 18:49:45 -04:00 |
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Abe Levitan
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f769806e68
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Lots of small changes
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2019-08-15 11:14:20 -04:00 |
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Abe Levitan
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06ce14fac9
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Fixed a small bug
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2019-07-01 15:27:57 -04:00 |
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Abe Levitan
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fe1f4db0c6
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Consistently get Bragg/specular geometry implemented across both models/datasets and dataloaders
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2019-07-01 15:02:14 -04:00 |
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Abe Levitan
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6b50e41614
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Add some sensible examples
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2019-06-28 16:01:53 -04:00 |
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Abe Levitan
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a2a07055c4
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Add sim-to-dataset capability
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2019-06-27 17:26:36 -04:00 |
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Abe Levitan
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f769f9e7ab
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Start moving the example code to datasets which can fit on the git server
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2019-06-26 17:47:09 -04:00 |
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Abe Levitan
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c246a5ed96
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Added a diffraction pattern browser
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2019-06-26 17:26:25 -04:00 |
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Abe Levitan
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c437f95a8e
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Loveplotting!
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2019-06-26 13:25:54 -04:00 |
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Abe Levitan
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8dc997ac4c
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Change the way plots are defined for inspect in preparation for adding liveplotting
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2019-06-26 12:24:13 -04:00 |
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Abe Levitan
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a09cd4b39e
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Add ability to load/use Bragg geometry ptycho data, also add a 1D convolve to try with the terrible data from CSX
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2019-05-22 20:20:43 -04:00 |
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Abe Levitan
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6471a17c34
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2019-05-22 13:00:56 -04:00 |
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Abe Levitan
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2a2b6ee960
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Add tool to restrict object support, plot a nanomap, and include mask on SHARP-style initialization
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2019-05-22 13:00:52 -04:00 |
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Maddie Cain
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4896d7354a
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fixed ePIE bug and shortened inspect function
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2019-05-12 22:58:37 -04:00 |
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Abe Levitan
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22899288fc
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Add probe propagation with initialization as a base feature to fancy_ptycho, and fix the test for orthogonalize_probes
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2019-05-03 12:30:53 -04:00 |
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Abe Levitan
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26de79ca92
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Include ability to read background from a .cxi file and include it in SHARP-style initialization
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2019-04-25 16:06:59 -04:00 |
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Abe Levitan
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d0a56c2d99
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Adding catch-all plotting tools and saving tools to models
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2019-04-25 15:46:36 -04:00 |
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Maddie Cain
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84ac2cc058
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added ePIE
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2019-04-24 12:26:32 -04:00 |
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Maddie Cain
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6a670a82af
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untested ptychography work
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2019-04-24 09:06:50 -04:00 |
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Abe Levitan
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bf8dbe086a
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Add the frantic work over the past few weeks, next challenge is to organize and test it
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2019-04-23 14:50:16 -04:00 |
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Maddie Cain
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2a717d9133
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fixed bug in centroid and began adding to simple_ptycho
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2019-04-18 01:01:37 -04:00 |
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Abe Levitan
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91f11643e9
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Make some tweaks to the simple ptycho model
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2019-04-10 10:25:05 -04:00 |
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Abe Levitan
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63c55582ec
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First pass at models, including the model for classic Ptychography
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2019-04-05 16:41:21 -04:00 |
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