9 Commits
Author SHA1 Message Date
allevitan 8ced842a58 Merge in master 2026-06-16 14:19:17 +02:00
levita_a a516f418b9 Fix a high priority bug where reconstructions will crash upon saving, and add test coverage to prevent a repeat 2026-04-20 15:40:55 +02:00
allevitanandClaude Sonnet 4.6 6aa5df081b Add from_results_dict / from_results_h5 model loading from saved h5 files
Adds two classmethods to CDIModel and its ptychography subclasses that
allow models to be reconstructed from saved .h5 result files without
needing the original dataset.

- CDIModel base class: add model_class and cdtools_version to
  save_results(); add _load_results_dict() helper (restores state_dict
  + training metadata); add from_results_dict() interface method and a
  concrete from_results_h5() that reads a file and delegates to
  from_results_dict() — subclasses inherit this for free.

- SimplePtycho: make save_results(dataset=None) optional (dataset was
  accepted but never used); add from_results_dict() which reconstructs
  from probe, obj, wavelength, probe_basis, and min_translation stored
  in the state_dict.

- FancyPtycho: add optional translations parameter to __init__,
  registered as original_translations buffer; update from_dataset to
  pass translations; make corrected_translations(dataset=None) fall back
  to self.original_translations when no dataset is provided; make
  save_results(dataset=None) use stored translations when no dataset is
  provided; add from_results_dict() that detects all optional features
  (mask, translation_offsets, weights, near-field propagators, etc.)
  from the state_dict and reconstructs the full model. Also fix a latent
  bug where background was passed to t.nn.Parameter() without
  t.as_tensor(), which now fails when given a numpy array.

All existing tests pass; new tests added for both models verifying that
state_dict, training metadata, and forward pass output are all restored
exactly after a round-trip through from_results_dict and from_results_h5.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-04-13 15:47:07 +02:00
levita_a d2c09acd44 Get all tests passing by updating the loss thresholds for the new normalizations, and add the new normalization to all models 2026-04-03 18:38:11 +02:00
allevitan ad2b09f2f0 Update the tests to work better when checking the model plotting, and make sure to cover panel_plot_mode=False 2026-03-24 16:19:26 +01:00
gnzng ecb8ee4864 linting test_simple_ptycho.py 2025-07-07 13:59:35 -07:00
yoshikisd 36de44565b Set fixed RNG seed for reconstruction pytests 2025-07-07 15:16:12 +00:00
Abe Levitan 13a2ba86df Make big changes to docs to update the tutorial section, and also to finally autoload the documentation of the models and datasets 2024-09-01 13:04:28 +02:00
levita_a 30a989fe3e Add first tests for models, and replace t.tensor with t.as_tensor in models 2024-08-30 16:10:26 +02:00