Write a multislice and s_matrix ptychography program

examples/debug_3d.py

@@ -0,0 +1,17 @@
+from __future__ import division, print_function, absolute_import
+import CDTools
+from matplotlib import pyplot as plt
+# First, we load an example dataset from a .cxi file
+filename = '/media/Data Bank/APS_HXN_07_19/CXIs/scan_94513_cxi.h5'
+
+#filename = 'data/scan_94361_cxi.h5'
+dataset = CDTools.datasets.Ptycho2DDataset.from_cxi(filename)
+# Next, we create a ptychography model from the dataset
+model = CDTools.models.Simple3DBPP.from_dataset(dataset)
+#import pdb; pdb.set_trace()
+model.inspect(dataset)
+plt.show()
+
+# # Now, we run a short reconstruction from the dataset!
+# for i, loss in enumerate(model.Adam_optimize(1, dataset)):
+#     print(i, loss)