diff --git a/pxiii_bec/bec_widgets/ComissioningGUIDraft.ui b/pxiii_bec/bec_widgets/ComissioningGUIDraft.ui
new file mode 100644
index 0000000..be17da6
--- /dev/null
+++ b/pxiii_bec/bec_widgets/ComissioningGUIDraft.ui
@@ -0,0 +1,135 @@
+
+
+ Form
+
+
+
+ 0
+ 0
+ 1801
+ 1459
+
+
+
+
+ 1801
+ 1459
+
+
+
+ Form
+
+
+ -
+
+
+ 0
+
+
+
+ Control Panel
+
+
+
-
+
+
+ -
+
+
+ -
+
+
+ -
+
+
+
+
+
+
+ Logbook
+
+
+ -
+
+
+
+ 24
+
+
+
+ Coming soon...
+
+
+
+
+
+
+
+ Take a break
+
+
+ -
+
+
+ -
+
+
+ Qt::Orientation::Horizontal
+
+
+
+ 1073
+ 20
+
+
+
+
+ -
+
+
+ Qt::Orientation::Vertical
+
+
+
+ 20
+ 40
+
+
+
+
+
+
+
+
+
+
+
+
+ ScanControl
+ QWidget
+
+
+
+ Waveform
+ QWidget
+
+
+
+ BECQueue
+ QWidget
+
+
+
+ Minesweeper
+ QWidget
+
+
+
+ ScanHistory
+ QWidget
+
+
+
+
+
+
diff --git a/pxiii_bec/bec_widgets/widgets/client.py b/pxiii_bec/bec_widgets/widgets/client.py
new file mode 100644
index 0000000..abc25f8
--- /dev/null
+++ b/pxiii_bec/bec_widgets/widgets/client.py
@@ -0,0 +1,40 @@
+# This file was automatically generated by generate_cli.py
+# type: ignore
+
+from __future__ import annotations
+
+from bec_lib.logger import bec_logger
+
+from bec_widgets.cli.rpc.rpc_base import RPCBase, rpc_call
+
+logger = bec_logger.logger
+
+# pylint: skip-file
+
+
+_Widgets = {
+ "ScanHistory": "ScanHistory",
+}
+
+
+class ScanHistory(RPCBase):
+ @rpc_call
+ def select_scan_from_history(self, value: "int") -> "None":
+ """
+ Set scan from CLI.
+
+ Args:
+ value (int) : value from history -1 ...-10000
+ """
+
+ @rpc_call
+ def add_scan_from_history(self) -> "None":
+ """
+ Load selected scan from history.
+ """
+
+ @rpc_call
+ def clear_plot(self) -> "None":
+ """
+ Delete all curves on the plot.
+ """
diff --git a/pxiii_bec/bec_widgets/widgets/scan_history/__init__.py b/pxiii_bec/bec_widgets/widgets/scan_history/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/pxiii_bec/bec_widgets/widgets/scan_history/register_scan_history.py b/pxiii_bec/bec_widgets/widgets/scan_history/register_scan_history.py
new file mode 100644
index 0000000..8de6b85
--- /dev/null
+++ b/pxiii_bec/bec_widgets/widgets/scan_history/register_scan_history.py
@@ -0,0 +1,15 @@
+def main(): # pragma: no cover
+ from qtpy import PYSIDE6
+
+ if not PYSIDE6:
+ print("PYSIDE6 is not available in the environment. Cannot patch designer.")
+ return
+ from PySide6.QtDesigner import QPyDesignerCustomWidgetCollection
+
+ from pxiii_bec.bec_widgets.widgets.scan_history.scan_history_plugin import ScanHistoryPlugin
+
+ QPyDesignerCustomWidgetCollection.addCustomWidget(ScanHistoryPlugin())
+
+
+if __name__ == "__main__": # pragma: no cover
+ main()
diff --git a/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.py b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.py
new file mode 100644
index 0000000..33072f8
--- /dev/null
+++ b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.py
@@ -0,0 +1,191 @@
+from __future__ import annotations
+
+import os
+from typing import TYPE_CHECKING, TypedDict
+
+from bec_lib.logger import bec_logger
+from bec_qthemes import material_icon
+from bec_widgets.utils.bec_widget import BECWidget
+
+
+from bec_widgets.utils.error_popups import SafeSlot
+from bec_widgets.utils.ui_loader import UILoader
+from qtpy.QtWidgets import QVBoxLayout, QWidget
+
+logger = bec_logger.logger
+
+if TYPE_CHECKING:
+ from qtpy.QtWidgets import QPushButton, QLabel, QSpinBox
+ from bec_widgets.widgets.plots.waveform.waveform import Waveform
+ from bec_widgets.widgets.control.device_input.device_combobox.device_combobox import DeviceComboBox
+ from bec_widgets.widgets.editors.text_box.text_box import TextBox
+
+
+class ScanHistoryUIComponents(TypedDict):
+ waveform: Waveform
+ metadata_text_box: TextBox
+ monitor_label: QLabel
+ monitor_combobox: DeviceComboBox
+ history_label: QLabel
+ history_spin_box: QSpinBox
+ history_add: QPushButton
+ history_clear: QPushButton
+
+
+class ScanHistory(BECWidget, QWidget):
+ USER_ACCESS = ["select_scan_from_history", "add_scan_from_history", "clear_plot"]
+ PLUGIN = True
+ ui_file = "./scan_history.ui"
+ components: ScanHistoryUIComponents
+
+ def __init__(self, parent=None, **kwargs):
+ super().__init__(parent=parent, **kwargs)
+ self._load_ui()
+
+ def _load_ui(self):
+ current_path = os.path.dirname(__file__)
+ self.ui = UILoader(self).loader(os.path.join(current_path, self.ui_file))
+ layout = QVBoxLayout()
+ layout.addWidget(self.ui)
+ self.setLayout(layout)
+
+ self.components: ScanHistoryUIComponents = {
+ "waveform" : self.ui.waveform,
+ "metadata_text_box" : self.ui.metadata_text_box,
+ "monitor_label" : self.ui.monitor_label,
+ "monitor_combobox" : self.ui.monitor_combobox,
+ "history_label" : self.ui.history_label,
+ "history_spin_box" : self.ui.history_spin_box,
+ "history_add" : self.ui.history_add,
+ "history_clear" : self.ui.history_clear,
+ }
+
+ icon_options = {"size": (16, 16), "convert_to_pixmap": False}
+
+ self.components['monitor_combobox'].apply_filter = False
+ self.components['monitor_combobox'].devices = ['dccm_diode_bottom', 'dccm_diode_top']
+
+ self.components['history_spin_box'].setMinimum(-10000)
+ self.components['history_spin_box'].setMaximum(-1)
+ self.components['history_spin_box'].valueChanged.connect(self._scan_history_selected)
+ self._scan_history_selected(-1)
+ self.components['history_spin_box'].setValue(-1)
+ self.components['history_add'].setText("Load")
+ self.components['history_add'].setStyleSheet(
+ "background-color: #129490; color: white; font-weight: bold; font-size: 12px;"
+ )
+
+ self.components['history_clear'].setText("Clear")
+ self.components['history_clear'].setStyleSheet(
+ "background-color: #065143; color: white; font-weight: bold; font-size: 12px;"
+ )
+
+ self.components['history_add'].clicked.connect(self._refresh_plot)
+ self.components['history_clear'].clicked.connect(self.clear_plot)
+ self.setWindowTitle("Scan History")
+ self._scan_history_selected(-1)
+
+ @SafeSlot()
+ def add_scan_from_history(self) -> None:
+ """Load selected scan from history."""
+ self.components['history_add'].click()
+
+ @SafeSlot()
+ def clear_plot(self) -> None:
+ """Delete all curves on the plot."""
+ self.components['waveform'].clear_all()
+
+ @SafeSlot()
+ def _refresh_plot(self) -> None:
+ """Refresh plot."""
+ spin_box_value = self.components['history_spin_box'].value()
+ self._check_scan_in_history(spin_box_value)
+
+ # Get the data from the client
+ data = self.client.history[spin_box_value]
+
+ # Check that the plot does not already have a curve with the same data
+ scan_number = int(data.metadata.bec['scan_number'])
+ monitor_name = self.components['monitor_combobox'].currentText()
+ # Get signal hints
+ signal_name = getattr(self.client.device_manager.devices, monitor_name)._hints
+ signal_name = signal_name[0] if len(signal_name)>0 else signal_name
+
+ curve_label = f"Scan-{scan_number}-{monitor_name}-{signal_name}"
+ if len([curve for curve in self.components['waveform'].curves if curve.config.label == curve_label]):
+ return
+ if not hasattr(data.devices, monitor_name):
+ raise ValueError(f"Device {monitor_name} not found in data.")
+
+ # Get scan motors and check that the plot x_axis motor is the same as the scan motor, if not, clear the plot
+ scan_motors = [motor.decode() for motor in data.metadata.bec['scan_motors']]
+ x_motor_name = self.components['waveform'].x_mode
+ if x_motor_name not in scan_motors:
+ self.clear_plot()
+ self.components['waveform'].x_mode = x_motor_name = scan_motors[0]
+
+ # fetching the data
+ monitor_data = getattr(data.devices, monitor_name).read()[signal_name]['value']
+ motor_data = getattr(data.devices, x_motor_name).read()[x_motor_name]['value']
+
+ # Plot custom curve, with custom label
+ self.components['waveform'].plot(x=motor_data, y=monitor_data, label=curve_label)
+ x_label = f"{x_motor_name} / [{getattr(self.client.device_manager.devices, x_motor_name).egu()}]"
+ self.components['waveform'].x_label = x_label
+
+ def _check_scan_in_history(self, history_value:int) -> None:
+ """
+ Check if scan is in history.
+
+ Args:
+ history_value (int): Value from history -1...-10000
+ """
+ if len(self.client.history) < abs(history_value):
+ self.components['metadata_text_box'].set_plain_text(f"Scan history does not have the request scan {history_value} of history with length: {len(self.client.history)}")
+ return
+
+
+ def select_scan_from_history(self, value:int) -> None:
+ """
+ Set scan from CLI.
+
+ Args:
+ value (int) : value from history -1 ...-10000
+ """
+ if value >=0:
+ raise ValueError(f"Value must be smaller or equal -1, provided {value}")
+ self.components['history_spin_box'].setValue(value)
+
+ @SafeSlot(int)
+ def _scan_history_selected(self, spin_box_value:int) -> None:
+ self._check_scan_in_history(spin_box_value)
+ data = self.client.history[spin_box_value]
+ data.metadata.bec['scan_motors'][0].decode()
+
+ text = str(data)
+ scan_motor_text = "\n" + "Scan Motors: "
+ for motor in data.metadata.bec['scan_motors']:
+ scan_motor_text += f" {motor.decode()}"
+
+ self.components['metadata_text_box'].set_plain_text(text + scan_motor_text)
+
+ @SafeSlot(str)
+ def _set_x_axis(self, device_x:str) -> None:
+ self.components['waveform'].x_mode = device_x
+
+ @SafeSlot(str)
+ def _plot_new_device(self, device:str) -> None:
+ # if len(curve for curve in self.components["waveform"].curves if curve.config.label == f"{device}-{device}":
+ self.components["waveform"].plot(device)
+
+
+if __name__ == "__main__": # pragma: no cover
+ import sys
+
+ from qtpy.QtWidgets import QApplication
+
+ app = QApplication(sys.argv)
+ widget = ScanHistory()
+
+ widget.show()
+ sys.exit(app.exec_())
diff --git a/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.pyproject b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.pyproject
new file mode 100644
index 0000000..591325d
--- /dev/null
+++ b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.pyproject
@@ -0,0 +1 @@
+{'files': ['scan_history.py']}
\ No newline at end of file
diff --git a/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.ui b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.ui
new file mode 100644
index 0000000..a1ba889
--- /dev/null
+++ b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history.ui
@@ -0,0 +1,115 @@
+
+
+ Form
+
+
+
+ 0
+ 0
+ 955
+ 796
+
+
+
+ Form
+
+
+ -
+
+
+
+ 0
+ 0
+
+
+
+
+ 0
+ 0
+
+
+
+
+ -
+
+
-
+
+
-
+
+
+
+
+
+ BPM Monitor
+
+
+
+ -
+
+
+ -
+
+
+ Scan History
+
+
+
+ -
+
+
+ -
+
+
+ Add scan
+
+
+
+ -
+
+
+ clear all
+
+
+
+
+
+ -
+
+
+
+ 0
+ 0
+
+
+
+
+ 795
+ 191
+
+
+
+
+
+
+
+
+
+
+ TextBox
+ QWidget
+
+
+
+ DeviceComboBox
+ QComboBox
+
+
+
+ Waveform
+ QWidget
+
+
+
+
+
+
diff --git a/pxiii_bec/bec_widgets/widgets/scan_history/scan_history_plugin.py b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history_plugin.py
new file mode 100644
index 0000000..51a986f
--- /dev/null
+++ b/pxiii_bec/bec_widgets/widgets/scan_history/scan_history_plugin.py
@@ -0,0 +1,54 @@
+# Copyright (C) 2022 The Qt Company Ltd.
+# SPDX-License-Identifier: LicenseRef-Qt-Commercial OR BSD-3-Clause
+
+from qtpy.QtDesigner import QDesignerCustomWidgetInterface
+
+from bec_widgets.utils.bec_designer import designer_material_icon
+from pxiii_bec.bec_widgets.widgets.scan_history.scan_history import ScanHistory
+
+DOM_XML = """
+
+
+
+
+"""
+
+
+class ScanHistoryPlugin(QDesignerCustomWidgetInterface): # pragma: no cover
+ def __init__(self):
+ super().__init__()
+ self._form_editor = None
+
+ def createWidget(self, parent):
+ t = ScanHistory(parent)
+ return t
+
+ def domXml(self):
+ return DOM_XML
+
+ def group(self):
+ return ""
+
+ def icon(self):
+ return designer_material_icon(ScanHistory.ICON_NAME)
+
+ def includeFile(self):
+ return "scan_history"
+
+ def initialize(self, form_editor):
+ self._form_editor = form_editor
+
+ def isContainer(self):
+ return False
+
+ def isInitialized(self):
+ return self._form_editor is not None
+
+ def name(self):
+ return "ScanHistory"
+
+ def toolTip(self):
+ return "ScanHistory"
+
+ def whatsThis(self):
+ return self.toolTip()
diff --git a/pxiii_bec/scripts/alignment_fit.py b/pxiii_bec/scripts/alignment_fit.py
new file mode 100644
index 0000000..5cd0418
--- /dev/null
+++ b/pxiii_bec/scripts/alignment_fit.py
@@ -0,0 +1,49 @@
+import numpy as np
+from scipy.ndimage import gaussian_filter1d
+from lmfit.models import GaussianModel
+
+
+def alignment_fit_and_plot(
+ history_index: int,
+ device_name: str,
+ signal_name: str | None = None,
+ smoothing_sigma: float = 2.0,
+):
+ """
+ Get data for a completed scan from the BEC history, apply smoothing, gaussian fit,
+ gradient, and plot all the results.
+
+ Args:
+ history_index (int): scan to fetch, e.g. -1 for the most recent scan
+ device_name (str): the device for which to get the monitoring data
+
+ """
+ # Fetch scan data from the history
+ # by default, signal = device name, unless otherwise specified
+ signal = signal_name or device_name
+ scan = bec.history[history_index]
+ md = scan.metadata["bec"]
+ data = scan.devices[device_name][signal].read()["value"]
+ # motor name is a bytes object in the metadata, so make a string
+ motor_name = md["scan_motors"][0].decode()
+
+ # Create a plot and a text box to display results
+ dock_area = bec.gui.new()
+ wf = dock_area.new().new(bec.gui.available_widgets.Waveform)
+ wf.title = f"Scan {md['scan_number']}: {md['scan_name']} of {motor_name}"
+ text = dock_area.new(position="right").new(widget=bec.gui.available_widgets.TextBox)
+
+ # Calculate some processed data and add everything to the plot
+ wf.plot(data, label="Raw data")
+ smoothed_data = gaussian_filter1d(data, smoothing_sigma)
+ wf.plot(smoothed_data, label="Smoothed")
+ gradient = np.gradient(smoothed_data)
+ wf.plot(gradient, label="gradient")
+
+ # Fit a Gaussian model to the smoothed data and show the fitting parameters in the textbox
+ x_data = scan.devices[motor_name][motor_name].read()["value"]
+ model = GaussianModel()
+ result = model.fit(smoothed_data, x=x_data)
+ text.set_plain_text(f"Fit parameters: \n{result.params.pretty_repr()}")
+
+ return result
diff --git a/pxiii_bec/scripts/kat.py b/pxiii_bec/scripts/kat.py
new file mode 100644
index 0000000..423a483
--- /dev/null
+++ b/pxiii_bec/scripts/kat.py
@@ -0,0 +1,30 @@
+def scan_theta2(scan_start, scan_end, stepno, exp):
+ # Save the motor starting position
+ start_value = dev.dccm_theta2.read()['dccm_theta2']['value']
+ print(f"Motor position is {start_value}")
+
+ # Run the scan
+ s = scans.line_scan(dev.dccm_theta2, scan_start, scan_end, steps=stepno, exp_time=exp, relative=True)
+
+ # data = s.devices[dccm_xbpm][dccm_xbpm].read()["value"]
+
+ # Move motor back to starting position and print XBPM reading
+ umv(dev.dccm_theta2, start_value)
+ xbpm_reading = dev.dccm_xbpm.read()['dccm_xbpm']['value']
+ print(f"Moving dccm_theta2 back to start position of where XBPM Reading is {xbpm_reading}")
+ end_value = dev.dccm_theta2.read()['dccm_theta2']['value']
+ print(f"Motor was at {start_value} before the scan, now at {end_value}")
+
+ # # Create a plot to display the results
+ dock_area = bec.gui.new()
+ wf = dock_area.new().new(bec.gui.available_widgets.Waveform)
+ wf.title = f"Scan of DCCM_theta2"
+ wf.plot(x_name='dccm_theta2', y_name='dccm_xbpm')
+ wf.add_dap_curve(device_label='dccm_xbpm-dccm_xbpm', dap_name='GaussianModel')
+ print(dap_xbpm.dap_params)
+
+
+
+
+
+