x07mb
265 lines
7.5 KiB
Python
265 lines
7.5 KiB
Python
# from unittest import mock
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import os
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import sys
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import time
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import numpy as np
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# import pandas
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# import pytest
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# from bec_lib import messages
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# import device_server
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# from ophyd import Component as Cpt
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from ophyd import Device, EpicsMotor, EpicsSignal, EpicsSignalRO
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# from ophyd import FormattedComponent as FCpt
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# from ophyd import Kind, PVPositioner, Signal
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# from ophyd.flyers import FlyerInterface
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# from ophyd.pv_positioner import PVPositionerComparator
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# from ophyd.status import DeviceStatus, SubscriptionStatus
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from bec_lib.config_helper import ConfigHelper
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from bec_lib.logger import bec_logger
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logger = bec_logger.logger
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# import ophyd
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# logger = bec_logger.logger
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# load simulation
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# bec.config.load_demo_config()
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# .. define base path for directory with scripts
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# next version
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class PhoenixBL:
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"""
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#
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# General class for PHOENIX beamline located in phoenix_bec/phoenic_bec/scripts
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#
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"""
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t0 = time.time()
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def __init__(self):
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"""
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init PhoenixBL() in phoenix_bec/scripts
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"""
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import os
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print("..... init PhoenixBL from phoenix_bec/scripts/phoenix.py")
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# load local configuration
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self.path_scripts_local = (
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"/data/test/x07mb-test-bec/bec_deployment/phoenix_bec/phoenix_bec/local_scripts/"
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)
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self.path_config_local = (
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self.path_scripts_local + "TEST_ConfigPhoenix/"
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) # base dir for local configurations
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self.path_devices_local = (
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self.path_config_local + "Local_device_config/"
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) # local yamal file
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self.file_devices_file_local = self.path_devices_local + "phoenix_devices.yaml"
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self.path_phoenix_bec = "/data/test/x07mb-test-bec/bec_deployment/phoenix_bec/"
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self.path_devices = self.path_phoenix_bec + "phoenix_bec/device_configs/"
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# yamal file for default configuration
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self.file_devices_file = (
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self.path_phoenix_bec + "phoenix_bec/device_configs/phoenix_devices.yaml"
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) # local yamal file
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self.file_devices_tmp = (
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self.path_phoenix_bec + "phoenix_bec/device_configs/current_devices_tmp.yaml"
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) # tmp configuration file. Will be electronicall created and appended if needed
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self.t0 = time.time()
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def read_local_phoenix_config(self):
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print("read file ")
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print(self.file_phoenix_devices_file)
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bec.config.update_session_with_file(self.file_devices_file_local)
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def create_base_config(self):
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# create a yaml file from standard configuration
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os.system("cat " + self.file_devices_file + " > " + self.file_devices_tmp)
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# os.system("ls -altr" + self.path_phoenix_bec + "phoenix_bec/devices")
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bec.config.update_session_with_file(self.file_devices_tmp)
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def add_phoenix_config(self):
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print("add_phoenix_config ")
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print("self.file_devices_file")
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bec.config.update_session_with_file(self.tmp.file_devices_file)
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def add_xmap(self):
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print("add xmap ")
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os.system("cat " + self.path_devices + "phoenix_xmap.yaml" + " >> " + self.file_devices_tmp)
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bec.config.update_session_with_file(self.file_devices_tmp)
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def add_falcon(self):
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print("add_falcon to existing configuration ")
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os.system(
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"cat " + self.path_devices + "phoenix_falcon.yaml" + " >> " + self.file_devices_tmp
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)
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bec.config.update_session_with_file(self.file_devices_tmp)
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def load_falcon(self):
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print("load_falcon")
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bec.config.update_session_with_file(self.path_devices + "phoenix_falcon.yaml")
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def show_phoenix_setup(self):
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print(self.path_phoenix_bec)
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os.system("cat " + self.path_phoenix_bec + "phoenix_bec/scripts/Current_setup.txt")
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@classmethod
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def my_log(cls, x):
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"""
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class method allows to write a user defined log file
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time is seconds relative to some point max 10 minutes ago
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"""
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print(time.time())
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now = time.time() - (86400 * (time.time() // 86400))
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now = now - 3600.0 * (now // 3600.0)
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now = now - 600.0 * (now // 600.0)
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m = str(now) + " sec " + x
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logger.success(m)
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file = open("MyLogfile.txt", "a")
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file.write(m + "\n")
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file.close
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class PhGroup:
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"""
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Class to create data groups
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compatible with larch groups
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initialize by
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ww=PhGroup('YourLabel')
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it creates a group
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with default attributes
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ww.label = 'YourLabel' --- for compatibility with larch groups
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ww.description =YourLabel'
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Further data can be added with new tags by
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ww.newtag=67
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(bec_venv) [gac-x07mb@x07mb-bec-001 phoenix_bec]$
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ww.keys() -- list all keys
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ww.linescan2group -- converts bec linescan data to group format
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"""
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def __init__(self, description):
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setattr(self, "description", description)
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# atribute 'label' for compatibility woith La groups...
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setattr(self, "label", description)
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# if type(NameTag)==list:
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# for i in NameTag:
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# setattr(self,i,None)
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# #endfor
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# else:
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# setattr(self,NameTag,None)
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# endif
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def add(self, NameTag, content):
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"""
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Add tags to group...
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Parameters
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----------
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NameTag : TYPE
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DESCRIPTION.
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content : TYPE
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DESCRIPTION.
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Returns
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-------
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None.
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"""
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setattr(self, NameTag, content)
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def keys(self):
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"""
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Method gets all atributes, which are not methods
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and which do not start with __
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Returns
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-------
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box : TYPE
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DESCRIPTION.
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"""
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box = []
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for i in self.__dir__():
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if "__" not in i:
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# print(i)
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if str(type(self.__getattribute__(i))) != "<class 'method'>":
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box.append(i)
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# endif
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# endfor
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return box
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def linescan2group(self, this_scan):
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"""
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method merges results of linescan into group and
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creates for each data a numpy variable constructed as
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group_name.{device_name}_{variable_name}_val (for value )
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group_name.{device_name}_{variable_name}_ts (for timestamp )
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"""
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print("keys")
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print(this_scan.scan.data.keys())
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for outer_key in this_scan.scan.data.keys():
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print("outer_key", outer_key)
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n_outer = len(this_scan.scan.data.keys())
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for inner_key in this_scan.scan.data[outer_key].keys():
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print("inner_key", inner_key)
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# calculate nunber of points
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n_inner = len(this_scan.scan.data[outer_key][inner_key].keys())
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value = np.zeros(n_inner)
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timestamp = np.zeros(n_inner)
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for i in range(n_inner):
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try:
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value[i] = this_scan.scan.data[outer_key][inner_key][i]["value"]
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except:
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value = None
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try:
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timestamp[i] = this_scan.scan.data[outer_key][inner_key][i]["timestamp"]
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except:
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timestamp[i] = None
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# endfor
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self.add(inner_key + "_" + outer_key + "_val", value)
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self.add(inner_key + "_" + outer_key + "_ts", timestamp)
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# endfor
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# endfor
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# endfor
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# enddef
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