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ophyd_devices/ophyd_devices/sim/sim_waveform.py
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308 lines
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Python

"""Module for a simulated 1D Waveform detector, i.e. a Falcon XRF detector."""
import os
import threading
import time
import traceback
from typing import Any
import numpy as np
from bec_lib import messages
from bec_lib.endpoints import MessageEndpoints
from bec_lib.logger import bec_logger
from ophyd import Component as Cpt
from ophyd import Device, DeviceStatus, Kind, Staged
from typeguard import typechecked
from ophyd_devices.sim.sim_data import SimulatedDataWaveform
from ophyd_devices.sim.sim_signals import ReadOnlySignal, SetableSignal
from ophyd_devices.utils import bec_utils
from ophyd_devices.utils.bec_signals import AsyncMultiSignal, AsyncSignal, ProgressSignal
from ophyd_devices.utils.errors import DeviceStopError
logger = bec_logger.logger
class AsyncUpdateSignal(SetableSignal):
"""Async updated signal, with check for async_update type."""
def check_value(self, value, **kwargs) -> None:
"""Check the value of the async_update signal."""
if value not in ["add_slice", "add"]:
raise ValueError(f"Invalid async_update type: {value} for signal {self.name}")
# FIXME: BEC issue #443 remove this method once tests in BEC are updated.
def put(self, value: Any) -> None:
"""Put the value of the async_update signal."""
if value in ["append", "extend"]:
if value == "append":
logger.warning(
f"Deprecated async_update of type {value} for signal {self.name}, falling back to 'add_slice'"
)
value = "add_slice"
elif value == "extend":
logger.warning(
f"Deprecated async_update of type {value} for signal {self.name}, falling back to 'add'"
)
value = "add"
super().put(value)
class SimWaveform(Device):
"""A simulated device mimic any 1D Waveform detector.
It's waveform is a computed signal, which is configurable by the user and from the command line.
The corresponding simulation class is sim_cls=SimulatedDataWaveform, more details on defaults within the simulation class.
>>> waveform = SimWaveform(name="waveform")
Parameters
----------
name (string) : Name of the device. This is the only required argument, passed on to all signals of the device.
precision (integer) : Precision of the readback in digits, written to .describe(). Default is 3 digits.
sim_init (dict) : Dictionary to initiate parameters of the simulation, check simulation type defaults for more details.
parent : Parent device, optional, is used internally if this signal/device is part of a larger device.
kind : A member the Kind IntEnum (or equivalent integer), optional. Default is Kind.normal. See Kind for options.
device_manager : DeviceManager from BEC, optional . Within startup of simulation, device_manager is passed on automatically.
"""
USER_ACCESS = ["sim", "registered_proxies", "delay_slice_update"]
sim_cls = SimulatedDataWaveform
SHAPE = (1000,)
BIT_DEPTH = np.uint16
SUB_MONITOR = "device_monitor_1d"
_default_sub = SUB_MONITOR
exp_time = Cpt(SetableSignal, name="exp_time", value=1, kind=Kind.config)
file_path = Cpt(SetableSignal, name="file_path", value="", kind=Kind.config)
file_pattern = Cpt(SetableSignal, name="file_pattern", value="", kind=Kind.config)
frames = Cpt(SetableSignal, name="frames", value=1, kind=Kind.config)
burst = Cpt(SetableSignal, name="burst", value=1, kind=Kind.config)
waveform_shape = Cpt(SetableSignal, name="waveform_shape", value=SHAPE, kind=Kind.config)
waveform = Cpt(
ReadOnlySignal,
name="waveform",
value=np.empty(SHAPE, dtype=BIT_DEPTH),
compute_readback=True,
kind=Kind.hinted,
)
waveform_0d = Cpt(AsyncSignal, name="waveform_0d", ndim=0, max_size=1000, kind=Kind.hinted)
data = Cpt(AsyncSignal, name="data", ndim=1, max_size=1000)
# Can be extend or append
async_update = Cpt(AsyncUpdateSignal, value="add", kind=Kind.config)
progress = Cpt(ProgressSignal, name="progress")
async_multi_data = Cpt(
AsyncMultiSignal, name="async_multi_data", signals=["data1", "data2"], ndim=1, max_size=1000
)
slice_size = Cpt(SetableSignal, value=100, dtype=np.int32, kind=Kind.config)
def __init__(
self,
name,
*,
kind=None,
parent=None,
sim_init: dict = None,
device_manager=None,
scan_info=None,
**kwargs,
):
self.sim_init = sim_init
self._registered_proxies = {}
self.sim = self.sim_cls(parent=self, **kwargs)
super().__init__(name=name, parent=parent, kind=kind, **kwargs)
if device_manager:
self.device_manager = device_manager
else:
self.device_manager = bec_utils.DMMock()
self.connector = self.device_manager.connector
self._stream_ttl = 1800 # 30 min max
self.stopped = False
self._staged = Staged.no
self._trigger_thread = None
self._trigger_received = 0
self.scan_info = scan_info
self._delay_slice_update = False
self._slice_index = 0
if self.sim_init:
self.sim.set_init(self.sim_init)
@property
def delay_slice_update(self) -> bool:
"""Delay updates in-between slices specified by waveform_shape and slice_size."""
return self._delay_slice_update
@delay_slice_update.setter
@typechecked
def delay_slice_update(self, value: bool) -> None:
self._delay_slice_update = value
@property
def registered_proxies(self) -> dict[str, Any]:
"""Dictionary of registered signal_names and proxies."""
return self._registered_proxies
def trigger(self) -> DeviceStatus:
"""Trigger the camera to acquire images.
This method can be called from BEC during a scan. It will acquire images and send them to BEC.
Whether the trigger is send from BEC is determined by the softwareTrigger argument in the device config.
Here, we also run a callback on SUB_MONITOR to send the image data the device_monitor endpoint in BEC.
"""
status = DeviceStatus(self)
self.waveform_0d.put(
np.random.randint(0, 100), async_update={"type": "add", "max_shape": [None]}
)
def acquire(status: DeviceStatus):
try:
for _ in range(self.burst.get()):
# values of the Waveform
values = self.waveform.get()
# add_slice option
if self.async_update.get() == "add_slice":
size = self.slice_size.get()
mod = len(values) % size
num_slices = len(values) // size + int(mod > 0)
for i in range(num_slices):
value_slice = values[i * size : min((i + 1) * size, len(values))]
logger.info(
f"Sending slice {i} of {self._slice_index} with length {len(value_slice)}"
)
self._run_subs(sub_type=self.SUB_MONITOR, value=value_slice)
self._send_async_update(index=self._slice_index, value=value_slice)
if self.delay_slice_update is True:
time.sleep(0.025) # 25ms to be really fast
if self.stopped:
raise DeviceStopError(f"{self.name} was stopped")
self._slice_index += 1
# option add
elif self.async_update.get() == "add":
self._run_subs(sub_type=self.SUB_MONITOR, value=values)
self._send_async_update(value=values)
else:
# This should never happen, but just in case
# we raise an exception
raise ValueError(f"Invalid async_update type: {self.async_update.get()}")
if self.stopped:
raise DeviceStopError(f"{self.name} was stopped")
status.set_finished()
# pylint: disable=broad-except
except Exception as exc:
content = traceback.format_exc()
status.set_exception(exc=exc)
logger.warning(f"Error in {self.name} trigger; Traceback: {content}")
self._trigger_thread = threading.Thread(target=acquire, args=(status,), daemon=True)
self._trigger_thread.start()
self._trigger_received += 1
self.progress.put(
value=self._trigger_received,
max_value=self.frames.get(),
done=self.frames.get() == self._trigger_received,
)
return status
def _send_async_update(self, value: Any, index: int | None = None) -> None:
"""
Send the async update to BEC.
Args:
index (int | None): The index of the slice to be sent. If None, the entire waveform is sent.
value (Any): The value to be sent.
"""
async_update_type = self.async_update.get()
waveform_shape = self.waveform_shape.get()
if async_update_type == "add_slice":
if index is not None:
async_update = {
"type": "add_slice",
"index": index,
"max_shape": [None, waveform_shape],
}
else:
async_update = {"type": "add", "max_shape": [None, waveform_shape]}
elif async_update_type == "add":
async_update = {"type": "add", "max_shape": [None]}
else:
raise ValueError(
f"Invalid async_update type: {async_update_type} for device {self.name}"
)
# TODO remove once BEC e2e test async data is updated to use AsyncSignal 'data'
msg = messages.DeviceMessage(
signals={self.waveform.name: {"value": value, "timestamp": time.time()}},
metadata={"async_update": async_update},
)
# Send the message to BEC
self.connector.xadd(
MessageEndpoints.device_async_readback(
scan_id=self.scan_info.msg.scan_id, device=self.name
),
{"data": msg},
expire=self._stream_ttl,
)
self.data.put(value, async_update=async_update)
self.async_multi_data.put(
{"data1": {"value": value}, "data2": {"value": value}}, async_update=async_update
)
def stage(self) -> list[object]:
"""Stage the camera for upcoming scan
This method is called from BEC in preparation of a scan.
It receives metadata about the scan from BEC,
compiles it and prepares the camera for the scan.
FYI: No data is written to disk in the simulation, but upon each trigger it
is published to the device_monitor endpoint in REDIS.
"""
if self._staged is Staged.yes:
return super().stage()
self.file_path.set(
os.path.join(
self.file_path.get(), self.file_pattern.get().format(self.scan_info.msg.scan_number)
)
)
self.frames.set(
self.scan_info.msg.num_points * self.scan_info.msg.scan_parameters["frames_per_trigger"]
)
self.exp_time.set(self.scan_info.msg.scan_parameters["exp_time"])
self.burst.set(self.scan_info.msg.scan_parameters["frames_per_trigger"])
self.stopped = False
self._slice_index = 0
self._trigger_received = 0
logger.warning(f"Staged {self.name}, scan_id : {self.scan_info.msg.scan_id}")
return super().stage()
def unstage(self) -> list[object]:
"""Unstage the device
Send reads from all config signals to redis
"""
logger.warning(f"Unstaging {self.name}, {self._staged}")
self._slice_index = 0
if self.stopped is True or not self._staged:
return super().unstage()
return super().unstage()
def stop(self, *, success=False):
"""Stop the device"""
self.stopped = True
if self._trigger_thread:
self._trigger_thread.join()
self._trigger_thread = None
super().stop(success=success)
if __name__ == "__main__": # pragma: no cover
waveform = SimWaveform(name="waveform")
waveform.sim.select_model("GaussianModel")