- tomo_scan_projection() now adds the projection to the reconstruction queue
itself (like flomni), so custom at_each_angle hooks and direct calls are
reconstructed; _at_each_angle()/MagLamNI no longer do it (no double entry).
tomo_alignment_scan() opts out (_reconstruct=False) to keep its previous
behaviour -- flomni's alignment projections are queued, LamNI's never were.
- write_pdf_report(): branch on tomo_type (a golden-ratio scan reported a stale
type-1 count and a hardcoded '8 sub-tomograms'), e-account from
bec.active_account, tolerate a missing detector_distance.
- tomo_parameters_cli(): range guards (stitch 0-50, frames 1-100, >= 8
projections, type-3 >= 1, golden max 0-1e6, bunch size 20-100).
- Webpage: projection count for tomo type 1 used flomni's 180-degree
sub-tomograms (half the real count); TOMO_TYPES gets a base_angle. Also show
the piezo range, manual shift and 0-degree reference rows.
- Tomo-params GUI: manual shift is mm end to end (label/range said um, +-1000);
golden bunch size floor 20 for LamNI (setter/CLI already required it, so a
smaller GUI value broke tomo_queue_execute). flomni fields untouched.
- lfzp_info() and the queue 'move Energy' entry used the legacy 'mokev' device
(only in device_configs/legacy); now ccm_energy.
- Special-angle UnboundLocalError fixed in flomni too (list consumed only after
a successful projection, so retries still see the special angle).
- Tomo type 3: exact integer sub-tomogram numbering (float truncation mislabelled
the boundary projection for ~35 values of n < 400).
- XrayEyeAlign.align(): always reset the GUI (DAP forwarding, crosshair) on any
failure; xrayeye_update_frame() warns when beamline states are invalid.
- Stale text / debug print; gap doc updated with the current status.
Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
hollerandClaude Sonnet 5
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