fix(heatmap): more robust logic for fast and slow axis in grid scan

This commit is contained in:
2025-12-15 15:14:16 +01:00
committed by Jan Wyzula
parent e0fd97616d
commit d876ca72bc
2 changed files with 155 additions and 51 deletions
+116 -2
View File
@@ -4,6 +4,7 @@ import numpy as np
import pytest
from bec_lib import messages
from bec_lib.scan_history import ScanHistory
from qtpy.QtCore import QPointF
from bec_widgets.widgets.plots.heatmap.heatmap import Heatmap, HeatmapConfig, HeatmapDeviceSignal
@@ -125,12 +126,16 @@ def test_heatmap_get_image_data_unsupported_scan(heatmap_widget):
def test_heatmap_get_grid_scan_image(heatmap_widget):
x_levels = np.linspace(-5, 5, 10).tolist()
y_levels = np.linspace(-5, 5, 10).tolist()
scan_msg = messages.ScanStatusMessage(
scan_id="123",
status="open",
scan_name="grid_scan",
metadata={},
info={"positions": np.random.rand(100, 2).tolist()},
info={
"positions": _grid_positions(slow_levels=x_levels, fast_levels=y_levels, snaked=True)
},
request_inputs={"arg_bundle": ["samx", -5, 5, 10, "samy", -5, 5, 10], "kwargs": {}},
)
heatmap_widget._image_config = HeatmapConfig(
@@ -145,6 +150,111 @@ def test_heatmap_get_grid_scan_image(heatmap_widget):
assert sorted(np.asarray(img, dtype=int).flatten().tolist()) == list(range(100))
def _grid_positions(
*, slow_levels: list[float], fast_levels: list[float], snaked: bool, slow_is_col0: bool = True
) -> list[list[float]]:
positions: list[list[float]] = []
for slow_i, slow_val in enumerate(slow_levels):
row_fast = fast_levels if (not snaked or slow_i % 2 == 0) else list(reversed(fast_levels))
for fast_val in row_fast:
if slow_is_col0:
positions.append([slow_val, fast_val])
else:
positions.append([fast_val, slow_val])
return positions
def test_heatmap_grid_scan_direction_and_snaking_x_fast(heatmap_widget):
heatmap_widget._image_config = HeatmapConfig(
parent_id="parent_id",
x_device=HeatmapDeviceSignal(name="samx", entry="samx"),
y_device=HeatmapDeviceSignal(name="samy", entry="samy"),
z_device=HeatmapDeviceSignal(name="bpm4i", entry="bpm4i"),
color_map="viridis",
)
# x decreases (relative), y increases (relative), x is fast axis
x0 = 10.0
y0 = -3.0
x_levels = (x0 + np.linspace(1.0, -1.0, 3)).tolist()
y_levels = (y0 + np.linspace(-2.0, 2.0, 2)).tolist()
snaked = True
scan_msg = messages.ScanStatusMessage(
scan_id="123",
status="open",
scan_name="grid_scan",
metadata={},
info={
"positions": _grid_positions(slow_levels=y_levels, fast_levels=x_levels, snaked=snaked)
},
request_inputs={
"arg_bundle": ["samy", -2.0, 2.0, 2, "samx", 1.0, -1.0, 3],
"kwargs": {"snaked": snaked, "relative": True},
},
)
img, transform = heatmap_widget.get_grid_scan_image(list(range(6)), msg=scan_msg)
assert img.shape == (3, 2)
assert img[0, 0] == 0 # first point: (x0,y0) in scan order
assert img[2, 1] == 3 # second row first point due to snaking
assert img[0, 1] == 5 # last point in second row
p0 = transform.map(QPointF(0.5, 0.5))
p1 = transform.map(QPointF(2.5, 1.5))
assert p0.x() == pytest.approx(x_levels[0])
assert p0.y() == pytest.approx(y_levels[0])
assert p1.x() == pytest.approx(x_levels[-1])
assert p1.y() == pytest.approx(y_levels[-1])
def test_heatmap_grid_scan_direction_and_snaking_y_fast(heatmap_widget):
heatmap_widget._image_config = HeatmapConfig(
parent_id="parent_id",
x_device=HeatmapDeviceSignal(name="samx", entry="samx"),
y_device=HeatmapDeviceSignal(name="samy", entry="samy"),
z_device=HeatmapDeviceSignal(name="bpm4i", entry="bpm4i"),
color_map="viridis",
)
# x decreases (relative), y increases (relative), y is fast axis
x0 = 1.5
y0 = 22.0
x_levels = (x0 + np.linspace(1.0, -1.0, 3)).tolist()
y_levels = (y0 + np.linspace(-2.0, 2.0, 2)).tolist()
snaked = True
scan_msg = messages.ScanStatusMessage(
scan_id="123",
status="open",
scan_name="grid_scan",
metadata={},
info={
"positions": _grid_positions(slow_levels=x_levels, fast_levels=y_levels, snaked=snaked)
},
request_inputs={
"arg_bundle": ["samx", 1.0, -1.0, 3, "samy", -2.0, 2.0, 2],
"kwargs": {"snaked": snaked, "relative": True},
},
)
img, transform = heatmap_widget.get_grid_scan_image(list(range(6)), msg=scan_msg)
assert img.shape == (3, 2)
assert img[0, 0] == 0
# For y-fast scans, snaking reverses the y index on every odd x row.
assert img[1, 1] == 2
assert img[1, 0] == 3
p0 = transform.map(QPointF(0.5, 0.5))
p1 = transform.map(QPointF(2.5, 1.5))
assert p0.x() == pytest.approx(x_levels[0])
assert p0.y() == pytest.approx(y_levels[0])
assert p1.x() == pytest.approx(x_levels[-1])
assert p1.y() == pytest.approx(y_levels[-1])
def test_heatmap_get_step_scan_image(heatmap_widget):
scan_msg = messages.ScanStatusMessage(
@@ -193,12 +303,16 @@ def test_heatmap_update_plot(heatmap_widget):
color_map="viridis",
)
heatmap_widget.scan_item = create_dummy_scan_item()
x_levels = np.linspace(-5, 5, 10).tolist()
y_levels = np.linspace(-5, 5, 10).tolist()
heatmap_widget.scan_item.status_message = messages.ScanStatusMessage(
scan_id="123",
status="open",
scan_name="grid_scan",
metadata={},
info={"positions": np.random.rand(100, 2).tolist()},
info={
"positions": _grid_positions(slow_levels=x_levels, fast_levels=y_levels, snaked=True)
},
request_inputs={"arg_bundle": ["samx", -5, 5, 10, "samy", -5, 5, 10], "kwargs": {}},
)
with mock.patch.object(heatmap_widget.main_image, "setImage") as mock_set_image: