logging levels modified; log interface for hipa added

base.py

@@ -5,6 +5,7 @@ from collections import OrderedDict
 from datetime import datetime
 import getpass
 import h5py
+import logging
 import inspect
 import platform
 import os
@@ -30,6 +31,8 @@ from pyqtacc.bdbase.readjson import ReadJSON
 from pyqtacc.bdbase.savehdf import QSaveHDF
 from pyqtacc.bdbase.hdf5filemenu import HDF5GroupBox
 from pyqtacc.bdbase.sendelog import QSendToELOG
+
+
 from pyqtacc.bdbase.screenshot import QScreenshot
 from pyqtacc.bdbase.guiframe import GUIFrame
 
@@ -317,7 +320,7 @@ class BaseWindow(QMainWindow):
 
     def __init__(self, parent=None, pymodule=None, appversion=None, title="",
                  user_mode=UserMode.OPERATION, facility=Facility.SwissFEL,
-                 extended=True, has_optics=True):
+                 extended=True, has_optics=True, has_procedure=True):
         super(BaseWindow, self).__init__(parent)
 
         self.parent = parent
@@ -331,7 +334,8 @@ class BaseWindow(QMainWindow):
         self.facility = facility
         self.user_mode = user_mode
         self.appname, self.appext = self.pymodule.split(".")
-            
+
+       
         print("=============================================")
         print("Starting {0} at: {1}".format(self.appname, datetime.now()))
         print("User: {0} Host: {1}".format(os.getlogin(), os.uname()[1]))
@@ -340,6 +344,8 @@ class BaseWindow(QMainWindow):
         self.settings = ReadJSON(self.appname)                                              
 
 
+        #Read out current_logbook
+
         self.cafe = PyCafe.CyCafe()
         self.cyca = PyCafe.CyCa()
         self.cafe_exception = PyCafe.CafeException
@@ -390,6 +396,12 @@ class BaseWindow(QMainWindow):
         self.stdlog_dest = (self.settings.data["stdlog"]["destination"] +
                             self.appname + "-" + os.getlogin() + ".log")
 
+        self.logging = logging
+        #self.logging.basicConfig(filename=self.stdlog_dest, level=logging.DEBUG)
+        self.logging.basicConfig(level=logging.NOTSET)
+        self.logger = self.logging.getLogger(__name__)
+        self.logger.info("Logging activated")
+
         self.date_str = None
         self.autopost_elog = True
 
@@ -441,7 +453,8 @@ class BaseWindow(QMainWindow):
             from src.analysis import AnalysisProcedure
             self.analysis_procedure = AnalysisProcedure(self)
         except ImportError as e:
-            print("Import Error:", e)
+            print(("Base class without user supplied AnalysisProcedure class."
+                   + " mport Error:"), e)
 
         ##self.trigger_elog_entry.connect(self.receive_elog_notification)
         ##self.trigger_hdf_save.connect(self.save_to_hdf)
@@ -492,14 +505,20 @@ class BaseWindow(QMainWindow):
 
         if self.facility == Facility.SwissFEL:
             from pyqtacc.sf.guiheader import GUIHeader
+            from pyqtacc.bdbase.sendelog import QSendToELOG
         elif self.facility == Facility.SLS:
             from pyqtacc.sls.guiheader import GUIHeader
+            from pyqtacc.sls.sendelogsls import QSendToELOG
+        elif self.facility == Facility.HIPA:
+            from pyqtacc.hipa.guiheader import GUIHeader
+            from pyqtacc.hipa.sendeloghipa import QSendToELOG    
 
         self.gui_header = GUIHeader(self, user_mode=self.user_mode,
                                     extended=extended)
         self.mainwindow_layout.addWidget(self.gui_header.header_wgt)
 
-        self.gui_frame = GUIFrame(self, has_optics=self.has_optics)
+        self.gui_frame = GUIFrame(self, has_optics=self.has_optics, 
+                                  has_procedure=has_procedure)
         self.show_log_message = self.gui_frame.show_log_message
 
         if self.autopost_hdf:
@@ -517,7 +536,7 @@ class BaseWindow(QMainWindow):
             self.mainwindow.setMinimumWidth(SLS_CENTRAL_WIDGET_MINIMUM_WIDTH)
 
         self.setCentralWidget(self.mainwindow)
-        self.show_log_message(MsgSeverity.INFO, _pymodule, _line(),
+        self.show_log_message(MsgSeverity.INFO.name, _pymodule, _line(),
                               "Application configured")
 
 
@@ -553,7 +572,7 @@ class BaseWindow(QMainWindow):
          
                         if self.settings.data["Parameters"][key]["flag"]:
                             self.input_parameters[key] = val
-                            self.all_input_parameters[key] = val
+                        self.all_input_parameters[key] = val
                             #print("val=",val, key)
 
                 except KeyError as e:
@@ -599,8 +618,8 @@ class BaseWindow(QMainWindow):
                             
                         if self.settings.data["Expert"][key]["flag"]:
                             self.expert_parameters[key] = val
-                            self.all_expert_parameters[key] = val
+                        self.all_expert_parameters[key] = val
-                            #print("val=",val, key)
+                        #print("val=",val, key)
 
                 except KeyError as e:
                     print("Key Error in base.py initialization:", e)
@@ -841,7 +860,7 @@ class BaseWindow(QMainWindow):
         """
         #Close all dock widgets
         #self.removeDockWidget(self.hdf_dock_widget)
-
+        self.logger.info("Closing Application")
         self.save_application_settings()
         QApplication.processEvents()
         self.cafe.monitorStopAll()
@@ -1177,6 +1196,7 @@ class BaseWindow(QMainWindow):
         #print("filename", self.hdf_filename)
 
     def verify_send_to_elog(self):
+       
         if self.analysis_thread is not None:
             if self.analysis_thread.isRunning():
                 _mess = ("Measurement in progress. " +
@@ -1210,6 +1230,9 @@ class BaseWindow(QMainWindow):
     def send_to_elog(self):
         """ Response to elog_action; normally overwritten
         """
+        if not  self.verify_send_to_elog():
+           return
+        '''
         if self.analysis_thread is not None:
             if self.analysis_thread.isRunning():
                 _mess = ("Measurement in progress. " +
@@ -1218,6 +1241,7 @@ class BaseWindow(QMainWindow):
                                         QMessageBox.Ok)
 
                 return
+        '''
 
         #_elog_sf = ElogSwissFEL()
         _logbook = None
@@ -1227,6 +1251,7 @@ class BaseWindow(QMainWindow):
         _attach_files = []
         _message = ""
 
+        
         QSendToELOG(self, logbook=_logbook, categoryIdx=_category_idx,
                     domainIdx=_domain_idx, sectionIdx=_section_idx,
                     title=self.title, message=_message,
@@ -1716,18 +1741,26 @@ class BaseWindow(QMainWindow):
 
     @Slot(dict)
     def receive_analysis_results(self, all_dict):
-        print("receive analysis results===>")
         self.all_data = all_dict
         self.gui_frame.canvas_update(all_dict['Figure data'])
-        print("here")
+       
+        if self.gui_frame.results_output_wgt_dict:
+            #all_dict['Processed data']['Results']={}
+            #all_dict['Processed data']['Results']['mean'] = 123.23 
+            #all_dict['Processed data']['Results']['SD'] = 0.23 
+            try:
+                results_data = all_dict['Processed data']['Results']
+                self.gui_frame.send_to_results_output_wgt(results_data)
+            except:
+                pass
+       
         self.gui_frame.central_tab_widget.setCurrentIndex(1)
-        self.gui_frame.results_tab_wgt.setCurrentIndex(0)
+        self.gui_frame.results_tab_wgt.setCurrentIndex(0)    
 
     @Slot()
     def receive_abort_analysis(self):
         """Instantiate action on abort
         """
-        print("Aborting", flush=True)
         if self.analysis_procedure.abort:
             return
         self.gui_frame.in_abort_procedure()
@@ -1834,6 +1867,9 @@ class BaseWindow(QMainWindow):
         elif facility == Facility.SLS:
             from pyqtacc.qrc_resources.facility.sls.pyrcc5 import qrc_resources
             print("FACILITY SLS")
+        elif facility == Facility.HIPA:
+            from pyqtacc.qrc_resources.facility.hipa.pyrcc5 import qrc_resources
+            print("FACILITY HIPA")
         else:
             print("Unknown Facility; assuming SLS")
             from pyqtacc.qrc_resources.facility.sls.pyrcc5 import qrc_resources
@@ -1920,7 +1956,8 @@ class BaseWindow(QMainWindow):
                 int_seconds_remaining = int(delay - (now-start1))
                 seconds_remaining = '{:2d}'.format(int_seconds_remaining)
                 self.splash_progressbar.setValue(val)
-                self.processEvents()
+                #self.processEvents()
+                self.flush()
                 sec_str = "s" if abs(int_seconds_remaining) != 1 else ""
                 mess = """
                 <br><p style='color:black; font-weight:bold;

enumkind.py

@@ -18,6 +18,7 @@ class Facility(IntEnum):
     PSI = 0
     SwissFEL = 1
     SLS = 2
+    HIPA = 3
 
 class MsgSeverity(IntEnum):
     """ For use with message logger
@@ -35,6 +36,7 @@ class UserMode(IntEnum):
     OPERATION = 1
     EXPERT = 2
     SIMULATION = 3
+   
 
 
 

sendelogframe.py

@@ -0,0 +1,324 @@
+import getpass
+import inspect
+import os
+import time
+
+from qtpy.QtCore import Qt
+from qtpy.QtWidgets import (QComboBox, QDialog, QFileDialog, QHBoxLayout,
+                            QLabel, QLineEdit, QPushButton, QTextEdit,
+                            QVBoxLayout)
+
+import elog  # https://github.com/paulscherrerinstitute/py_elog
+from pyqtacc.bdbase.enumkind import MsgSeverity
+
+_version = "1.0.0"
+_pymodule = os.path.basename(__file__)
+_appname, _appext = _pymodule.split(".")
+
+def _line():
+    """Macro to return the current line number.
+
+    The current line number within the file is used when
+    reporting messages to the message logging window.
+
+    Returns:
+        int: Current line number.
+    """
+    return inspect.currentframe().f_back.f_lineno
+
+class QSendToELOGFrame(QDialog):
+    """ Graphical interface to elog
+    """
+    def __init__(self, parent, logbook=None, title=None, message=None,
+                 attachFile=None, destination_folder=None):
+        super().__init__()
+             
+        self.files_text = ''
+        self.fflag = False
+        self.parent = parent
+       
+        if destination_folder is None:
+            self.destination = self.parent.elog_dest + " / " +  self.parent.appname 
+        else:
+            self.destination = destination_folder
+        self.window_title = self.parent.appname + ": " + _appname
+        self.pymodule = _pymodule
+           
+        self.setWindowTitle(self.window_title)
+
+        elog_books = list(self.parent.settings.data["ElogBooks"])
+        self.elog_items = QComboBox()
+        self.elog_items.addItems(elog_books)
+        self.elog_items.currentIndexChanged.connect(self.on_elog_change)
+        idx = 0
+             
+        if logbook is not None:
+            try:
+                idx = elog_books.index(logbook)
+            except Exception:
+                mess = "Index not found for logbook {0}".format(logbook)
+                self.parent.show_log_message(MsgSeverity.WARN, self.pymodule,
+                                             _line(), mess)
+                
+                
+        else:
+            logbook = self.parent.settings.data["Elog"]["book"]
+            try:
+                idx = elog_books.index(logbook)
+            except Exception:
+                mess = "Index not found for logbook {0}".format(logbook)
+                self.parent.show_log_message(MsgSeverity.WARN, self.pymodule,
+                                             _line(), mess)
+                
+        self.logbook = logbook
+
+        self.elog_items.setCurrentIndex(idx)
+        self.elog_items.currentIndexChanged.emit(idx)
+        self.elog_items.setObjectName("Elog")
+
+        self.title_items = QHBoxLayout()
+        self.title_items.addWidget(QLabel('Title:     '))
+        self.titleline = QLineEdit()
+        self.titleline.setObjectName('Elog')
+        #self.titleline.setStatusTip('elog')
+        if title is None:
+            title = self.parent.appname
+        self.titleline.setText(str(title))
+        self.titleline.setFixedWidth(300)
+        self.titleline.setAlignment(Qt.AlignCenter)
+        self.title_items.addWidget(self.titleline)
+
+        self.applicationbox = QHBoxLayout()
+        self.applicationbox.addWidget(QLabel('Application:'))
+        self.applicationlabel = QLabel(self.parent.pymodule)
+        self.applicationlabel.setObjectName("Elog")
+        # self.applicationbox.addStretch()
+        self.applicationbox.addWidget(self.applicationlabel)
+
+        logbook = QHBoxLayout()
+        logbook.addWidget(QLabel('Logbook: '))
+        logbook.addWidget(self.elog_items)
+
+
+        authorbox = QHBoxLayout()
+        authorbox.addWidget(QLabel('Author: '))
+        self.author = QLineEdit()
+        self.author.setObjectName('Elog')
+        self.author.setFixedWidth(195)
+        self.author.setStatusTip('elog')
+        self.author.setText(getpass.getuser())
+        authorbox.addWidget(self.author)
+
+        self.files = []
+        self.attributes = {}
+       
+        self.layout = QVBoxLayout(self)
+        self.layout.addLayout(logbook)
+        self.layout.addLayout(self.applicationbox)
+        
+        self.layout.addLayout(authorbox)
+        self.layout.addLayout(self.title_items)
+       
+        report = QLabel('Report: ')
+        self.layout.addWidget(report)
+        self.message = QTextEdit(message)
+        self.layout.addWidget(self.message)
+
+        filebox = QHBoxLayout()
+        qlfile = QLabel('Attach:')
+        qlfile.setAlignment(Qt.AlignTop)
+        filebox.addWidget(qlfile)
+
+        self.filesE = QTextEdit()
+        self.filesE.setAlignment(Qt.AlignTop)
+        self.filesE.setFixedHeight(80)
+        self.filesE.setReadOnly(True)
+
+        self.attachFile = attachFile
+
+        if self.attachFile is not None:
+            _attachFile = []
+            if isinstance(self.attachFile, str):
+                _attachFile.append(self.attachFile)
+            elif isinstance(self.attachFile, list):
+                _attachFile = self.attachFile
+            for i, file in enumerate(_attachFile):
+                _attach_base = os.path.basename(file)
+                if i > 0:
+                    self.files_text += "\n"
+                self.files_text += str(_attach_base)
+                self.filesE.setText(self.files_text)
+                self.fflag = True
+
+        filebox.addWidget(self.filesE)
+        
+        openCloseVBox = QVBoxLayout()
+        self.openBtn = QPushButton('Add')
+        self.openBtn.setAutoDefault(False)
+        self.openBtn.clicked.connect(self.openFiles)
+        openCloseVBox.addWidget(self.openBtn)
+
+        closeBtn = QPushButton('Clear')
+        closeBtn.setAutoDefault(False)
+        closeBtn.clicked.connect(self.clearFiles)
+        openCloseVBox.addWidget(closeBtn)
+
+        filebox.addLayout(openCloseVBox)
+        self.layout.addLayout(filebox)
+
+        btnLayout = QHBoxLayout()
+        self.okBtn = QPushButton('Send')
+        self.okBtn.setAutoDefault(False)
+        self.okBtn.clicked.connect(self.ok)
+
+        self.cancelBtn = QPushButton('Cancel')
+        self.cancelBtn.setAutoDefault(False)
+        self.cancelBtn.clicked.connect(self.close)
+        btnLayout.addWidget(self.okBtn)
+        btnLayout.addWidget(self.cancelBtn)
+        self.messagelbl = QLabel('')
+        self.messagelbl.setStyleSheet("QLabel {  color : red; }")
+        self.layout.addWidget(self.messagelbl)
+        self.layout.addLayout(btnLayout)
+
+        self.setMinimumWidth(440)
+        #self.exec()
+
+    def on_elog_change(self, elog_change_val):
+        if "test" in self.elog_items.currentText():
+            _bgcolor = "QComboBox {background: plum; color : black;}"
+        else:
+            _bgcolor = "QComboBox {background: lightblue; color : black;}"
+        self.elog_items.setStyleSheet(_bgcolor)
+
+
+    def ok(self):
+        message = self.message.document().toPlainText()
+        if not message:
+            self.messagelbl.setText('Please enter a brief Report')
+            return
+        title = self.titleline.text()
+        if not title:
+            self.messagelbl.setText('Titel attribute is required')
+            return
+       
+        author = self.author.text()
+        application = self.applicationlabel.text()
+        self.attributes['Autor'] = author
+        self.attributes['Author'] = author
+        self.attributes['Application'] = application
+        self.attributes['Titel'] = title
+        self.attributes['Title'] = title
+        self.attributes['When'] = str(time.time())
+        self.attributes['Wann'] = str(time.time())
+
+       
+
+        if self.attachFile is not None:
+            _attachFile = []
+            if isinstance(self.attachFile, str):
+                _attachFile.append(self.attachFile)
+            elif isinstance(self.attachFile, list):
+                _attachFile = self.attachFile
+            for i in range(0, len(_attachFile)):
+                if "/tmp" in _attachFile[i]:
+                    self.files.append(str(_attachFile[i]))
+                elif "/afs/psi.ch" in _attachFile[i]:
+                    self.files.append(str(_attachFile[i]))
+                elif "/sls/bd/data/" in _attachFile[i]:
+                    self.files.append(str(_attachFile[i]))
+                else:
+                    self.files.append(self.destination + str(_attachFile[i]))
+
+        el = self.elog_items.currentText()
+            
+        url = self.parent.settings.data["ElogBooks"][el]["url"]
+
+        self.logbook = elog.open(url, user='robot', password='robot')
+
+     
+        try:
+            if self.files:
+                self.logbook.post(message, attributes=self.attributes,
+                                  attachments=self.files)
+            else:
+                self.logbook.post(message, attributes=self.attributes)
+
+            #self.trigger_elog_entry.emit(True, url, "OK")
+            self.receive_elog_notification(True, url, "OK")
+        except Exception as ex:
+            #self.trigger_elog_entry.emit(False, url, str(ex))
+            print("Exception in sendelog.py", str(ex))
+            self.receive_elog_notification(False, url, str(ex))
+
+        #for file in self.files:
+        #    if os.path.exists(file):
+        #        os.remove(file)
+   
+        self.close()
+
+
+    def clearFiles(self):
+        self.attachFile = []
+        self.filesE.clear()
+        self.files = []
+        self.files_text = ''
+        self.fflag = False
+
+    def openFiles(self):
+        # Notethat openFiles also gets called when qDialog cacnel is clicked!
+        qFileDialog = QFileDialog()
+        extensions = ("Images (*.bmp *.eps *.gif *.jpeg *.jpg *.pdf *.png " +
+                      "*.ps *.tiff *.xpm);;Text files (*.txt *.text);;" +
+                      "JSON/XML files (*.json *.xml)")
+
+        flocal = qFileDialog.getOpenFileNames(
+            self, 'Open File', self.destination, extensions)[0]
+
+        if not flocal:
+            return
+        self.files.append(flocal[0])
+        if self.fflag:
+            self.files_text += '\n'
+        self.files_text += str(flocal[0].split('/')[-1])
+        self.fflag = True
+        self.filesE.setText(self.files_text)
+
+
+    def receive_elog_notification(self, is_accepted, logbook_url, elog_message):
+        '''Receive notification from ELOG, and report to log window'''
+
+        yes_no = "made" if is_accepted else "failed"
+        mess = "Entry into ELOG: {0} {1}".format(logbook_url, yes_no)
+
+        if is_accepted:
+            self.parent.show_log_message(MsgSeverity.INFO, self.pymodule,
+                                         _line(), mess)
+        else:
+            mess += ".\n" + elog_message
+            self.parent.show_log_message(MsgSeverity.WARN, self.pymodule,
+                                         _line(), mess)
+        self.parent.statusbar.showMessage(mess)
+
+
+    def get_logbook_specific_items(self, logbook):
+        '''Retrieve logbook specific options'''
+        #First check what is the logbook being requested?
+        #find layout items
+        layout_items = []
+        layout_items_optional = []
+        try:
+            layout_items = list(self.parent.settings.data[
+                "ElogBooks"][logbook]['Required'].keys())
+        except KeyError:
+            pass
+        try:
+            layout_items_optional = list(self.parent.settings.data[
+                "ElogBooks"][logbook]['Optional'].keys())
+        except KeyError:
+            pass
+
+        layout_items.extend(layout_items_optional)
+        
+        return layout_items
+