diff --git a/autodeploy/setup.sh b/autodeploy/setup.sh
index 8a184b7..3f86e9c 100755
--- a/autodeploy/setup.sh
+++ b/autodeploy/setup.sh
@@ -26,9 +26,12 @@ SCRIPT_PATH=$(dirname "$0")
 
 export CONDA_OVERRIDE_GLIBC=2.28
 
-chmod +x ./pixi
-./pixi init || true
-./pixi install --all
+chmod +x "${GITHUB_WORKSPACE}/pixi"
+
+cd "$DESTINATION_DIR"
+
+"${GITHUB_WORKSPACE}/pixi" init || true
+"${GITHUB_WORKSPACE}/pixi" install --all
 
 # chmod -R g=u .