Tested machine update

runOpticsTools.sh

@@ -0,0 +1,14 @@
+#!/bin/bash
+
+BASEDIR=$(dirname $0)
+echo "Script location: ${BASEDIR}"
+# runs in the sfbd conda environment SLIC
+source  /sf/bd/packages/conda/etc/profile.d/conda.sh
+conda activate slic
+export PYTHONPATH=/sf/bd/packages/slic:/sf/bd/packages/sfbd:/sf/bd/packages/bstrd:/sf/bd/packages/pyrealta:/sf/bd/packages/onlinemodel:$PYTHONPATH
+cd $BASEDIR
+python OpticsTools.py
+# needs command line arguments
+#-debug 1 -offline 0
+
+