The chemical formula from the GUI (qt3) will be added to the _Seq_Results.dat file header and used by the root macro when plotting the fractions.
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@ -2475,6 +2475,17 @@ sub StartSequenceOne
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}
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# Create a subdirectory where all input/output files are saved
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if (-d $All{"Path"}) {
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# Directory exists, do nothing
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} else {
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$cmd="mkdir ".$All{"Path"};
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system($cmd);
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}
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# Change work directory accordingly
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chdir ($All{"Path"});
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# Cleanup from old files
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if (-e "ausgabe1.inp") {
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system("rm -f ausgabe*");
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@ -2594,8 +2605,25 @@ sub StartSequenceOne
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# $cmd="mv -f $FILENAME.* ".$All{"Path"};
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# system($cmd);
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}
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# An easy way to keep track of chemical formula is to replace impL_i by the corresponding chemical formula of layer i
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open (INF,q{<}, "fort.33" );
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my @lines = <INF>;
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close(INF);
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my $all_lines = join("",@lines);
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for (my $i=1;$i<=$All{"NL"};$i++){
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my $LComp = "L".$i."Comp";
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my $chem_formula = $All{"$LComp"};
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my $place_holder = "impL".$i;
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$all_lines =~ s/$place_holder/$chem_formula/g;
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}
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my $seq_file = $All{"FNPre"}."_Seq_Results.dat";
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open (SEQF,q{>}, "$seq_file" );
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print SEQF $all_lines;
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close(SEQF);
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# Move the fort.33 file into the subdirectory and change its name
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$cmd="rm -f eingabe1.inp; mv -f fort.33 ".$All{"Path"}."/".$All{"FNPre"}."_Seq_Results.dat";
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$cmd="rm -f eingabe1.inp; rm -f fort.33";
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system($cmd);
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$Progress=100;
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Progress->setProgress($Progress);
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@ -2661,7 +2689,7 @@ sub PlotProfiles
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# "Warning:\nClose the plot using the menu FILE -> Quit ROOT\nDO NOT CLOSE USING X.");
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my $TrimPath = $ENV{'PERLLIB'};
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# Now that we have the file list send it to root macro for plotting.
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my $cmd='root -n -l "'.$TrimPath.'/plotRge.C(\"'.$filenames.'\")"&';
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my $cmd='root -n -l "'.$TrimPath.'/../plotRge.C(\"'.$filenames.'\")"&';
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# my $pid = open(FTO,"$cmd");
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# my $pid = open(FTO,"$cmd 2>&1 |");
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@ -2688,10 +2716,12 @@ sub PlotFraction
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if ($file ne "" ) {
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my $TrimPath = $ENV{'PERLLIB'};
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# Now that we have the file name send it to root macro for plotting.
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my $cmd='root -n -l "'.$TrimPath.'/plotFrc.C(\"'.$file.'\")"&';
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my $cmd='root -n -l "'.$TrimPath.'/../plotFrc.C(\"'.$file.'\")"&';
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my $pid=system($cmd);
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}
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my $pid=system($cmd);
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}
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}
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@ -2702,8 +2732,6 @@ sub OpenAboutWindow
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my $HelpText="TrimSPGUI is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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TrimSPGUI is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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@ -2943,7 +2971,6 @@ sub GUIPath
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return $FileBrowser ;
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}
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sub TrimBin
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@ -684,7 +684,7 @@ void TrimSPGUI::PlotProfiles()
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# "Warning:\nClose the plot using the menu FILE -> Quit ROOT\nDO NOT CLOSE USING X.");
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my $TrimPath = $ENV{'PERLLIB'};
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# Now that we have the file list send it to root macro for plotting.
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my $cmd='root -n -l "'.$TrimPath.'/plotRge.C(\"'.$filenames.'\")"&';
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my $cmd='root -n -l "'.$TrimPath.'/../plotRge.C(\"'.$filenames.'\")"&';
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# my $pid = open(FTO,"$cmd");
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# my $pid = open(FTO,"$cmd 2>&1 |");
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@ -710,7 +710,7 @@ void TrimSPGUI::PlotFraction()
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if ($file ne "" ) {
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my $TrimPath = $ENV{'PERLLIB'};
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# Now that we have the file name send it to root macro for plotting.
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my $cmd='root -n -l "'.$TrimPath.'/plotFrc.C(\"'.$file.'\")"&';
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my $cmd='root -n -l "'.$TrimPath.'/../plotFrc.C(\"'.$file.'\")"&';
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my $pid=system($cmd);
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}
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