1037 lines
162 KiB
HTML
1037 lines
162 KiB
HTML
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
<html xmlns="http://www.w3.org/1999/xhtml" lang="en-US">
|
|
<head>
|
|
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
|
|
<meta http-equiv="X-UA-Compatible" content="IE=11"/>
|
|
<meta name="generator" content="Doxygen 1.13.2"/>
|
|
<meta name="viewport" content="width=device-width, initial-scale=1"/>
|
|
<title>musrfit: /workspace/LMU/musrfit/src/msr2data.cpp Source File</title>
|
|
<link href="tabs.css" rel="stylesheet" type="text/css"/>
|
|
<script type="text/javascript" src="jquery.js"></script>
|
|
<script type="text/javascript" src="dynsections.js"></script>
|
|
<script type="text/javascript" src="clipboard.js"></script>
|
|
<link href="navtree.css" rel="stylesheet" type="text/css"/>
|
|
<script type="text/javascript" src="navtreedata.js"></script>
|
|
<script type="text/javascript" src="navtree.js"></script>
|
|
<script type="text/javascript" src="resize.js"></script>
|
|
<script type="text/javascript" src="cookie.js"></script>
|
|
<link href="doxygen.css" rel="stylesheet" type="text/css" />
|
|
</head>
|
|
<body>
|
|
<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
|
|
<div id="titlearea">
|
|
<table cellspacing="0" cellpadding="0">
|
|
<tbody>
|
|
<tr id="projectrow">
|
|
<td id="projectalign">
|
|
<div id="projectname">musrfit<span id="projectnumber"> 1.9.9</span>
|
|
</div>
|
|
</td>
|
|
</tr>
|
|
</tbody>
|
|
</table>
|
|
</div>
|
|
<!-- end header part -->
|
|
<!-- Generated by Doxygen 1.13.2 -->
|
|
<script type="text/javascript">
|
|
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
|
$(function() { codefold.init(0); });
|
|
/* @license-end */
|
|
</script>
|
|
<script type="text/javascript" src="menudata.js"></script>
|
|
<script type="text/javascript" src="menu.js"></script>
|
|
<script type="text/javascript">
|
|
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
|
$(function() {
|
|
initMenu('',false,false,'search.php','Search',true);
|
|
});
|
|
/* @license-end */
|
|
</script>
|
|
<div id="main-nav"></div>
|
|
</div><!-- top -->
|
|
<div id="side-nav" class="ui-resizable side-nav-resizable">
|
|
<div id="nav-tree">
|
|
<div id="nav-tree-contents">
|
|
<div id="nav-sync" class="sync"></div>
|
|
</div>
|
|
</div>
|
|
<div id="splitbar" style="-moz-user-select:none;"
|
|
class="ui-resizable-handle">
|
|
</div>
|
|
</div>
|
|
<script type="text/javascript">
|
|
/* @license magnet:?xt=urn:btih:d3d9a9a6595521f9666a5e94cc830dab83b65699&dn=expat.txt MIT */
|
|
$(function(){initNavTree('msr2data_8cpp_source.html',''); initResizable(true); });
|
|
/* @license-end */
|
|
</script>
|
|
<div id="doc-content">
|
|
<div class="header">
|
|
<div class="headertitle"><div class="title">msr2data.cpp</div></div>
|
|
</div><!--header-->
|
|
<div class="contents">
|
|
<a href="msr2data_8cpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a id="l00001" name="l00001"></a><span class="lineno"> 1</span><span class="comment">/***************************************************************************</span></div>
|
|
<div class="line"><a id="l00002" name="l00002"></a><span class="lineno"> 2</span><span class="comment"></span> </div>
|
|
<div class="line"><a id="l00003" name="l00003"></a><span class="lineno"> 3</span><span class="comment"> msr2data.cpp</span></div>
|
|
<div class="line"><a id="l00004" name="l00004"></a><span class="lineno"> 4</span><span class="comment"></span> </div>
|
|
<div class="line"><a id="l00005" name="l00005"></a><span class="lineno"> 5</span><span class="comment"> Author: Bastian M. Wojek / Andreas Suter</span></div>
|
|
<div class="line"><a id="l00006" name="l00006"></a><span class="lineno"> 6</span><span class="comment"> e-mail: andreas.suter@psi.ch</span></div>
|
|
<div class="line"><a id="l00007" name="l00007"></a><span class="lineno"> 7</span><span class="comment"></span> </div>
|
|
<div class="line"><a id="l00008" name="l00008"></a><span class="lineno"> 8</span><span class="comment">***************************************************************************/</span></div>
|
|
<div class="line"><a id="l00009" name="l00009"></a><span class="lineno"> 9</span> </div>
|
|
<div class="line"><a id="l00010" name="l00010"></a><span class="lineno"> 10</span><span class="comment">/***************************************************************************</span></div>
|
|
<div class="line"><a id="l00011" name="l00011"></a><span class="lineno"> 11</span><span class="comment"> * Copyright (C) 2009-2025 by Bastian M. Wojek / Andreas Suter *</span></div>
|
|
<div class="line"><a id="l00012" name="l00012"></a><span class="lineno"> 12</span><span class="comment"> * andreas.suter@psi.ch *</span></div>
|
|
<div class="line"><a id="l00013" name="l00013"></a><span class="lineno"> 13</span><span class="comment"> * *</span></div>
|
|
<div class="line"><a id="l00014" name="l00014"></a><span class="lineno"> 14</span><span class="comment"> * This program is free software; you can redistribute it and/or modify *</span></div>
|
|
<div class="line"><a id="l00015" name="l00015"></a><span class="lineno"> 15</span><span class="comment"> * it under the terms of the GNU General Public License as published by *</span></div>
|
|
<div class="line"><a id="l00016" name="l00016"></a><span class="lineno"> 16</span><span class="comment"> * the Free Software Foundation; either version 2 of the License, or *</span></div>
|
|
<div class="line"><a id="l00017" name="l00017"></a><span class="lineno"> 17</span><span class="comment"> * (at your option) any later version. *</span></div>
|
|
<div class="line"><a id="l00018" name="l00018"></a><span class="lineno"> 18</span><span class="comment"> * *</span></div>
|
|
<div class="line"><a id="l00019" name="l00019"></a><span class="lineno"> 19</span><span class="comment"> * This program is distributed in the hope that it will be useful, *</span></div>
|
|
<div class="line"><a id="l00020" name="l00020"></a><span class="lineno"> 20</span><span class="comment"> * but WITHOUT ANY WARRANTY; without even the implied warranty of *</span></div>
|
|
<div class="line"><a id="l00021" name="l00021"></a><span class="lineno"> 21</span><span class="comment"> * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *</span></div>
|
|
<div class="line"><a id="l00022" name="l00022"></a><span class="lineno"> 22</span><span class="comment"> * GNU General Public License for more details. *</span></div>
|
|
<div class="line"><a id="l00023" name="l00023"></a><span class="lineno"> 23</span><span class="comment"> * *</span></div>
|
|
<div class="line"><a id="l00024" name="l00024"></a><span class="lineno"> 24</span><span class="comment"> * You should have received a copy of the GNU General Public License *</span></div>
|
|
<div class="line"><a id="l00025" name="l00025"></a><span class="lineno"> 25</span><span class="comment"> * along with this program; if not, write to the *</span></div>
|
|
<div class="line"><a id="l00026" name="l00026"></a><span class="lineno"> 26</span><span class="comment"> * Free Software Foundation, Inc., *</span></div>
|
|
<div class="line"><a id="l00027" name="l00027"></a><span class="lineno"> 27</span><span class="comment"> * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. *</span></div>
|
|
<div class="line"><a id="l00028" name="l00028"></a><span class="lineno"> 28</span><span class="comment"> ***************************************************************************/</span></div>
|
|
<div class="line"><a id="l00029" name="l00029"></a><span class="lineno"> 29</span> </div>
|
|
<div class="line"><a id="l00030" name="l00030"></a><span class="lineno"> 30</span><span class="comment">// note: msr2data is on purpose implemented in a way that shows string handling can be done solely</span></div>
|
|
<div class="line"><a id="l00031" name="l00031"></a><span class="lineno"> 31</span><span class="comment">// using std::string, boost and related standard C++ features</span></div>
|
|
<div class="line"><a id="l00032" name="l00032"></a><span class="lineno"> 32</span><span class="comment">// This implies, however, occasionally strange constructs when interoperating with PMusr-classes</span></div>
|
|
<div class="line"><a id="l00033" name="l00033"></a><span class="lineno"> 33</span><span class="comment">// which mostly rely on ROOT's TString.</span></div>
|
|
<div class="line"><a id="l00034" name="l00034"></a><span class="lineno"> 34</span> </div>
|
|
<div class="line"><a id="l00035" name="l00035"></a><span class="lineno"> 35</span><span class="preprocessor">#ifdef HAVE_CONFIG_H</span></div>
|
|
<div class="line"><a id="l00036" name="l00036"></a><span class="lineno"> 36</span><span class="preprocessor">#include "config.h"</span></div>
|
|
<div class="line"><a id="l00037" name="l00037"></a><span class="lineno"> 37</span><span class="preprocessor">#endif</span></div>
|
|
<div class="line"><a id="l00038" name="l00038"></a><span class="lineno"> 38</span> </div>
|
|
<div class="line"><a id="l00039" name="l00039"></a><span class="lineno"> 39</span><span class="preprocessor">#ifdef HAVE_GIT_REV_H</span></div>
|
|
<div class="line"><a id="l00040" name="l00040"></a><span class="lineno"> 40</span><span class="preprocessor">#include "git-revision.h"</span></div>
|
|
<div class="line"><a id="l00041" name="l00041"></a><span class="lineno"> 41</span><span class="preprocessor">#endif</span></div>
|
|
<div class="line"><a id="l00042" name="l00042"></a><span class="lineno"> 42</span> </div>
|
|
<div class="line"><a id="l00043" name="l00043"></a><span class="lineno"> 43</span><span class="preprocessor">#include "<a class="code" href="PMusr_8h.html">PMusr.h</a>"</span></div>
|
|
<div class="line"><a id="l00044" name="l00044"></a><span class="lineno"> 44</span><span class="preprocessor">#include "<a class="code" href="PMsr2Data_8h.html">PMsr2Data.h</a>"</span></div>
|
|
<div class="line"><a id="l00045" name="l00045"></a><span class="lineno"> 45</span> </div>
|
|
<div class="line"><a id="l00046" name="l00046"></a><span class="lineno"> 46</span><span class="preprocessor">#include <algorithm></span></div>
|
|
<div class="line"><a id="l00047" name="l00047"></a><span class="lineno"> 47</span><span class="preprocessor">#include <sstream></span></div>
|
|
<div class="line"><a id="l00048" name="l00048"></a><span class="lineno"> 48</span><span class="preprocessor">#include <iostream></span></div>
|
|
<div class="line"><a id="l00049" name="l00049"></a><span class="lineno"> 49</span><span class="preprocessor">#include <fstream></span></div>
|
|
<div class="line"><a id="l00050" name="l00050"></a><span class="lineno"> 50</span><span class="preprocessor">#include <cstdlib></span></div>
|
|
<div class="line"><a id="l00051" name="l00051"></a><span class="lineno"> 51</span><span class="preprocessor">#include <limits></span></div>
|
|
<div class="line"><a id="l00052" name="l00052"></a><span class="lineno"> 52</span><span class="preprocessor">#include <string></span></div>
|
|
<div class="line"><a id="l00053" name="l00053"></a><span class="lineno"> 53</span><span class="preprocessor">#include <memory></span></div>
|
|
<div class="line"><a id="l00054" name="l00054"></a><span class="lineno"> 54</span> </div>
|
|
<div class="line"><a id="l00055" name="l00055"></a><span class="lineno"> 55</span><span class="preprocessor">#include <boost/algorithm/string.hpp></span></div>
|
|
<div class="line"><a id="l00056" name="l00056"></a><span class="lineno"> 56</span><span class="preprocessor">#include <boost/algorithm/string/case_conv.hpp></span> <span class="comment">// for to_lower() in std::string</span></div>
|
|
<div class="line"><a id="l00057" name="l00057"></a><span class="lineno"> 57</span> </div>
|
|
<div class="line"><a id="l00058" name="l00058"></a><span class="lineno"> 58</span><span class="preprocessor">#include <boost/lexical_cast.hpp></span> <span class="comment">// for atoi-replacement</span></div>
|
|
<div class="line"><a id="l00059" name="l00059"></a><span class="lineno"> 59</span> </div>
|
|
<div class="line"><a id="l00060" name="l00060"></a><span class="lineno"> 60</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00070" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00070" name="l00070"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f"> 70</a></span><span class="keywordtype">bool</span> <a class="code hl_function" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a>(<span class="keyword">const</span> std::string &s)</div>
|
|
<div class="line"><a id="l00071" name="l00071"></a><span class="lineno"> 71</span>{</div>
|
|
<div class="line"><a id="l00072" name="l00072"></a><span class="lineno"> 72</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> number(0);</div>
|
|
<div class="line"><a id="l00073" name="l00073"></a><span class="lineno"> 73</span> <span class="keywordflow">try</span> {</div>
|
|
<div class="line"><a id="l00074" name="l00074"></a><span class="lineno"> 74</span> number = boost::lexical_cast<unsigned int>(s);</div>
|
|
<div class="line"><a id="l00075" name="l00075"></a><span class="lineno"> 75</span> <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
|
|
<div class="line"><a id="l00076" name="l00076"></a><span class="lineno"> 76</span> }</div>
|
|
<div class="line"><a id="l00077" name="l00077"></a><span class="lineno"> 77</span> <span class="keywordflow">catch</span>(boost::bad_lexical_cast &) {</div>
|
|
<div class="line"><a id="l00078" name="l00078"></a><span class="lineno"> 78</span> <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00079" name="l00079"></a><span class="lineno"> 79</span> }</div>
|
|
<div class="line"><a id="l00080" name="l00080"></a><span class="lineno"> 80</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00081" name="l00081"></a><span class="lineno"> 81</span> </div>
|
|
<div class="line"><a id="l00082" name="l00082"></a><span class="lineno"> 82</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00086" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00086" name="l00086"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c"> 86</a></span><span class="keywordtype">void</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>()</div>
|
|
<div class="line"><a id="l00087" name="l00087"></a><span class="lineno"> 87</span>{</div>
|
|
<div class="line"><a id="l00088" name="l00088"></a><span class="lineno"> 88</span> std::cout << std::endl << <span class="stringliteral">"usage 0: msr2data [--version] | [--help]"</span>;</div>
|
|
<div class="line"><a id="l00089" name="l00089"></a><span class="lineno"> 89</span> std::cout << std::endl << <span class="stringliteral">"usage 1: msr2data <run> <extension> options"</span>;</div>
|
|
<div class="line"><a id="l00090" name="l00090"></a><span class="lineno"> 90</span> std::cout << std::endl << <span class="stringliteral">"usage 2: msr2data <run1> <run2> <extension> options"</span>;</div>
|
|
<div class="line"><a id="l00091" name="l00091"></a><span class="lineno"> 91</span> std::cout << std::endl << <span class="stringliteral">"usage 3: msr2data \\[<runList>\\] <extension> options"</span>;</div>
|
|
<div class="line"><a id="l00092" name="l00092"></a><span class="lineno"> 92</span> std::cout << std::endl << <span class="stringliteral">"usage 4: msr2data <runListFileName> <extension> options"</span>;</div>
|
|
<div class="line"><a id="l00093" name="l00093"></a><span class="lineno"> 93</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00094" name="l00094"></a><span class="lineno"> 94</span> std::cout << std::endl << <span class="stringliteral">" <runList> can be:"</span>;</div>
|
|
<div class="line"><a id="l00095" name="l00095"></a><span class="lineno"> 95</span> std::cout << std::endl << <span class="stringliteral">" (i) <run0>, <run1>, <run2>, ... <runN> : run numbers, e.g. 123 124"</span>;</div>
|
|
<div class="line"><a id="l00096" name="l00096"></a><span class="lineno"> 96</span> std::cout << std::endl << <span class="stringliteral">" (ii) <run0>-<runN> : a range, e.g. 123-125 -> 123 124 125"</span>;</div>
|
|
<div class="line"><a id="l00097" name="l00097"></a><span class="lineno"> 97</span> std::cout << std::endl << <span class="stringliteral">" (iii) <run0>:<runN>:<step> : a sequence, e.g. 123:127:2 -> 123 125 127"</span>;</div>
|
|
<div class="line"><a id="l00098" name="l00098"></a><span class="lineno"> 98</span> std::cout << std::endl << <span class="stringliteral">" <step> will give the step width and has to be a positive number!"</span>;</div>
|
|
<div class="line"><a id="l00099" name="l00099"></a><span class="lineno"> 99</span> std::cout << std::endl << <span class="stringliteral">" a <runList> can also combine (i)-(iii), e.g. 123 128-130 133, etc."</span>;</div>
|
|
<div class="line"><a id="l00100" name="l00100"></a><span class="lineno"> 100</span> std::cout << std::endl << <span class="stringliteral">" <runListFileName> : an ASCII file containing a list of run numbers and optional"</span>;</div>
|
|
<div class="line"><a id="l00101" name="l00101"></a><span class="lineno"> 101</span> std::cout << std::endl << <span class="stringliteral">" external parameters is passed to msr2data. For details see"</span>;</div>
|
|
<div class="line"><a id="l00102" name="l00102"></a><span class="lineno"> 102</span> std::cout << std::endl << <span class="stringliteral">" the online documentation: http://lmu.web.psi.ch/musrfit/user/MUSR/Msr2Data.html"</span>;</div>
|
|
<div class="line"><a id="l00103" name="l00103"></a><span class="lineno"> 103</span> std::cout << std::endl << <span class="stringliteral">" <extension> : msr-file extension, e.g. _tf_h13 for the file name 8472_tf_h13.msr"</span>;</div>
|
|
<div class="line"><a id="l00104" name="l00104"></a><span class="lineno"> 104</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00105" name="l00105"></a><span class="lineno"> 105</span> std::cout << std::endl << <span class="stringliteral">"options:"</span>;</div>
|
|
<div class="line"><a id="l00106" name="l00106"></a><span class="lineno"> 106</span> std::cout << std::endl << <span class="stringliteral">" -o<outputfile> : specify the name of the DB or column-data output file; default: out.db/out.dat"</span>;</div>
|
|
<div class="line"><a id="l00107" name="l00107"></a><span class="lineno"> 107</span> std::cout << std::endl << <span class="stringliteral">" if the option '-o none' is used, no output file will be written."</span>;</div>
|
|
<div class="line"><a id="l00108" name="l00108"></a><span class="lineno"> 108</span> std::cout << std::endl << <span class="stringliteral">" new : before writing a new output file, delete the contents of any existing file with the same name"</span>;</div>
|
|
<div class="line"><a id="l00109" name="l00109"></a><span class="lineno"> 109</span> std::cout << std::endl << <span class="stringliteral">" data : instead of to a DB file the data are written to a simple column structure"</span>;</div>
|
|
<div class="line"><a id="l00110" name="l00110"></a><span class="lineno"> 110</span> std::cout << std::endl << <span class="stringliteral">" header : force writing of the file header to the output file"</span>;</div>
|
|
<div class="line"><a id="l00111" name="l00111"></a><span class="lineno"> 111</span> std::cout << std::endl << <span class="stringliteral">" noheader : no file header is written to the output file"</span>;</div>
|
|
<div class="line"><a id="l00112" name="l00112"></a><span class="lineno"> 112</span> std::cout << std::endl << <span class="stringliteral">" If either none or both of the header options are given, the file header will be written"</span>;</div>
|
|
<div class="line"><a id="l00113" name="l00113"></a><span class="lineno"> 113</span> std::cout << std::endl << <span class="stringliteral">" if a new file is created, but not if the output file exists already!"</span>;</div>
|
|
<div class="line"><a id="l00114" name="l00114"></a><span class="lineno"> 114</span> std::cout << std::endl << <span class="stringliteral">" nosummary : no additional data from the run data file is written to the output file"</span>;</div>
|
|
<div class="line"><a id="l00115" name="l00115"></a><span class="lineno"> 115</span> std::cout << std::endl << <span class="stringliteral">" paramList <param> : option used to select the parameters which shall be exported."</span>;</div>
|
|
<div class="line"><a id="l00116" name="l00116"></a><span class="lineno"> 116</span> std::cout << std::endl << <span class="stringliteral">" <param> is a list of parameter numbers to be exported. Allowed lists are:"</span>;</div>
|
|
<div class="line"><a id="l00117" name="l00117"></a><span class="lineno"> 117</span> std::cout << std::endl << <span class="stringliteral">" 1-16 will export parameters 1 to 16. 1 3 5 will export parameters 1 3 5."</span>;</div>
|
|
<div class="line"><a id="l00118" name="l00118"></a><span class="lineno"> 118</span> std::cout << std::endl << <span class="stringliteral">" A combination of both is possible, e.g. 1-16 19 31 62, and so on."</span>;</div>
|
|
<div class="line"><a id="l00119" name="l00119"></a><span class="lineno"> 119</span> std::cout << std::endl << <span class="stringliteral">" fit : invoke musrfit to fit the specified runs"</span>;</div>
|
|
<div class="line"><a id="l00120" name="l00120"></a><span class="lineno"> 120</span> std::cout << std::endl << <span class="stringliteral">" All msr input files are assumed to be present, none is newly generated!"</span>;</div>
|
|
<div class="line"><a id="l00121" name="l00121"></a><span class="lineno"> 121</span> std::cout << std::endl << <span class="stringliteral">" fit-<template>! : generate msr files for the runs to be processed from the <template> run"</span>;</div>
|
|
<div class="line"><a id="l00122" name="l00122"></a><span class="lineno"> 122</span> std::cout << std::endl << <span class="stringliteral">" and call musrfit for fitting these runs"</span>;</div>
|
|
<div class="line"><a id="l00123" name="l00123"></a><span class="lineno"> 123</span> std::cout << std::endl << <span class="stringliteral">" fit-<template> : same as above, but the <template> run is only used for the first file creation---"</span>;</div>
|
|
<div class="line"><a id="l00124" name="l00124"></a><span class="lineno"> 124</span> std::cout << std::endl << <span class="stringliteral">" the successive files are generated using the musrfit output from the preceding runs"</span>;</div>
|
|
<div class="line"><a id="l00125" name="l00125"></a><span class="lineno"> 125</span> std::cout << std::endl << <span class="stringliteral">" msr-<template> : same as above without calling musrfit"</span>;</div>
|
|
<div class="line"><a id="l00126" name="l00126"></a><span class="lineno"> 126</span> std::cout << std::endl << <span class="stringliteral">" In case any fitting option is present, this option is ignored!"</span>;</div>
|
|
<div class="line"><a id="l00127" name="l00127"></a><span class="lineno"> 127</span> std::cout << std::endl << <span class="stringliteral">" -k, --keep-mn2-output : if fitting is used, pass the option --keep-mn2-output to musrfit"</span>;</div>
|
|
<div class="line"><a id="l00128" name="l00128"></a><span class="lineno"> 128</span> std::cout << std::endl << <span class="stringliteral">" -t, --title-from-data-file : if fitting is used, pass the option --title-from-data-file to musrfit"</span>;</div>
|
|
<div class="line"><a id="l00129" name="l00129"></a><span class="lineno"> 129</span> std::cout << std::endl << <span class="stringliteral">" -e, --estimateN0: estimate N0 for single histogram fits."</span>;</div>
|
|
<div class="line"><a id="l00130" name="l00130"></a><span class="lineno"> 130</span> std::cout << std::endl << <span class="stringliteral">" -y, --yaml: write fit results (MINUIT2.OUTPUT) into a yaml-file. Output <msr-file>.yaml"</span>;</div>
|
|
<div class="line"><a id="l00131" name="l00131"></a><span class="lineno"> 131</span> std::cout << std::endl << <span class="stringliteral">" -p, --per-run-block-chisq: will per run block chisq to the msr-file."</span>;</div>
|
|
<div class="line"><a id="l00132" name="l00132"></a><span class="lineno"> 132</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00133" name="l00133"></a><span class="lineno"> 133</span> std::cout << std::endl << <span class="stringliteral">" global : switch on the global-fit mode"</span>;</div>
|
|
<div class="line"><a id="l00134" name="l00134"></a><span class="lineno"> 134</span> std::cout << std::endl << <span class="stringliteral">" Within that mode all specified runs will be united in a single msr file!"</span>;</div>
|
|
<div class="line"><a id="l00135" name="l00135"></a><span class="lineno"> 135</span> std::cout << std::endl << <span class="stringliteral">" The fit parameters can be either run specific or common to all runs."</span>;</div>
|
|
<div class="line"><a id="l00136" name="l00136"></a><span class="lineno"> 136</span> std::cout << std::endl << <span class="stringliteral">" For a complete description of this feature please refer to the manual."</span>;</div>
|
|
<div class="line"><a id="l00137" name="l00137"></a><span class="lineno"> 137</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00138" name="l00138"></a><span class="lineno"> 138</span> std::cout << std::endl << <span class="stringliteral">" global+[!] : operate in the global-fit mode, however, in case a global input file is created"</span>;</div>
|
|
<div class="line"><a id="l00139" name="l00139"></a><span class="lineno"> 139</span> std::cout << std::endl << <span class="stringliteral">" all specified runs are pre-analyzed first one by one using the given template."</span>;</div>
|
|
<div class="line"><a id="l00140" name="l00140"></a><span class="lineno"> 140</span> std::cout << std::endl << <span class="stringliteral">" For the generation of the global input file, the run-specific parameter values are taken"</span>;</div>
|
|
<div class="line"><a id="l00141" name="l00141"></a><span class="lineno"> 141</span> std::cout << std::endl << <span class="stringliteral">" from this pre-analysis for each run---they are not just copied from the template."</span>;</div>
|
|
<div class="line"><a id="l00142" name="l00142"></a><span class="lineno"> 142</span> std::cout << std::endl << <span class="stringliteral">" The specification of '!' determines which fit mode (see above) is used for this pre-analysis."</span>;</div>
|
|
<div class="line"><a id="l00143" name="l00143"></a><span class="lineno"> 143</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00144" name="l00144"></a><span class="lineno"> 144</span> std::cout << std::endl << <span class="stringliteral">" Typical examples:"</span>;</div>
|
|
<div class="line"><a id="l00145" name="l00145"></a><span class="lineno"> 145</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00146" name="l00146"></a><span class="lineno"> 146</span> std::cout << std::endl << <span class="stringliteral">" msr2data 2047 2050 _tf_histo fit-2046"</span>;</div>
|
|
<div class="line"><a id="l00147" name="l00147"></a><span class="lineno"> 147</span> std::cout << std::endl << <span class="stringliteral">" will use 2046_tf_histo.msr as templete, and subsequently generating 2047_tf_histo.msr until"</span>;</div>
|
|
<div class="line"><a id="l00148" name="l00148"></a><span class="lineno"> 148</span> std::cout << std::endl << <span class="stringliteral">" 2050_tf_histo.msr and fit them."</span>;</div>
|
|
<div class="line"><a id="l00149" name="l00149"></a><span class="lineno"> 149</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00150" name="l00150"></a><span class="lineno"> 150</span> std::cout << std::endl << <span class="stringliteral">" msr2data 2047 2050 _tf_histo msr-2046"</span>;</div>
|
|
<div class="line"><a id="l00151" name="l00151"></a><span class="lineno"> 151</span> std::cout << std::endl << <span class="stringliteral">" will use 2046_tf_histo.msr as templete, and subsequently generating 2047_tf_histo.msr until"</span>;</div>
|
|
<div class="line"><a id="l00152" name="l00152"></a><span class="lineno"> 152</span> std::cout << std::endl << <span class="stringliteral">" 2050_tf_histo.msr, but NO fitting will be done."</span>;</div>
|
|
<div class="line"><a id="l00153" name="l00153"></a><span class="lineno"> 153</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00154" name="l00154"></a><span class="lineno"> 154</span> std::cout << std::endl << <span class="stringliteral">" msr2data 2046 2050 _tf_histo -o fitParam.db"</span>;</div>
|
|
<div class="line"><a id="l00155" name="l00155"></a><span class="lineno"> 155</span> std::cout << std::endl << <span class="stringliteral">" will collect the fit parameters from runs 2046-2050 (msr-files 2046_tf_histo.msr etc.) and"</span>;</div>
|
|
<div class="line"><a id="l00156" name="l00156"></a><span class="lineno"> 156</span> std::cout << std::endl << <span class="stringliteral">" write them to the file fitParam.db (DB-format)."</span>;</div>
|
|
<div class="line"><a id="l00157" name="l00157"></a><span class="lineno"> 157</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00158" name="l00158"></a><span class="lineno"> 158</span> std::cout << std::endl << <span class="stringliteral">" msr2data [2047:2053:2 2056] _tf_histo fit-2045"</span>;</div>
|
|
<div class="line"><a id="l00159" name="l00159"></a><span class="lineno"> 159</span> std::cout << std::endl << <span class="stringliteral">" will use 2045_tf_histo.msr as templete, and subsequently generating msr-files from the run-list:"</span>;</div>
|
|
<div class="line"><a id="l00160" name="l00160"></a><span class="lineno"> 160</span> std::cout << std::endl << <span class="stringliteral">" 2047 2049 2051 2053 2056 (2047_tf_histo.msr etc.) and fit them."</span>;</div>
|
|
<div class="line"><a id="l00161" name="l00161"></a><span class="lineno"> 161</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00162" name="l00162"></a><span class="lineno"> 162</span> std::cout << std::endl << <span class="stringliteral">" msr2data 2046 2058 _tf_histo paramList 1-12 data -o fitParam.dat"</span>;</div>
|
|
<div class="line"><a id="l00163" name="l00163"></a><span class="lineno"> 163</span> std::cout << std::endl << <span class="stringliteral">" will export the parameters number 1 trough 12 in a column like fashion of the runs 2046 to 2058,"</span>;</div>
|
|
<div class="line"><a id="l00164" name="l00164"></a><span class="lineno"> 164</span> std::cout << std::endl << <span class="stringliteral">" collected form the msr-files 2046_tf_histo.msr and so on."</span>;</div>
|
|
<div class="line"><a id="l00165" name="l00165"></a><span class="lineno"> 165</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00166" name="l00166"></a><span class="lineno"> 166</span> std::cout << std::endl << <span class="stringliteral">" For further information please refer to"</span>;</div>
|
|
<div class="line"><a id="l00167" name="l00167"></a><span class="lineno"> 167</span> std::cout << std::endl << <span class="stringliteral">" http://lmu.web.psi.ch/musrfit/user/html/msr2data.html#msr2data"</span>;</div>
|
|
<div class="line"><a id="l00168" name="l00168"></a><span class="lineno"> 168</span> std::cout << std::endl << std::endl;</div>
|
|
<div class="line"><a id="l00169" name="l00169"></a><span class="lineno"> 169</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00170" name="l00170"></a><span class="lineno"> 170</span> </div>
|
|
<div class="line"><a id="l00171" name="l00171"></a><span class="lineno"> 171</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00182" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00182" name="l00182"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#a7d3987fc1f326133c36ffd551acbc716"> 182</a></span>std::string <a class="code hl_function" href="msr2data_8cpp.html#a7d3987fc1f326133c36ffd551acbc716">msr2data_validArguments</a>(<span class="keyword">const</span> std::vector<std::string> &arg)</div>
|
|
<div class="line"><a id="l00183" name="l00183"></a><span class="lineno"> 183</span>{</div>
|
|
<div class="line"><a id="l00184" name="l00184"></a><span class="lineno"> 184</span> std::string word;</div>
|
|
<div class="line"><a id="l00185" name="l00185"></a><span class="lineno"> 185</span> </div>
|
|
<div class="line"><a id="l00186" name="l00186"></a><span class="lineno"> 186</span> <span class="keywordflow">for</span> (std::vector<std::string>::const_iterator iter(arg.begin()); iter != arg.end(); ++iter) {</div>
|
|
<div class="line"><a id="l00187" name="l00187"></a><span class="lineno"> 187</span> <span class="keywordflow">if</span> ( (!iter->compare(<span class="stringliteral">"header"</span>)) || (!iter->compare(<span class="stringliteral">"noheader"</span>)) || (!iter->compare(<span class="stringliteral">"nosummary"</span>)) \</div>
|
|
<div class="line"><a id="l00188" name="l00188"></a><span class="lineno"> 188</span> || (!iter->substr(0,3).compare(<span class="stringliteral">"fit"</span>)) || (!iter->compare(<span class="stringliteral">"-k"</span>)) || (!iter->compare(<span class="stringliteral">"--keep-mn2-output"</span>)) \</div>
|
|
<div class="line"><a id="l00189" name="l00189"></a><span class="lineno"> 189</span> || (!iter->compare(<span class="stringliteral">"-t"</span>)) || (!iter->compare(<span class="stringliteral">"--title-from-data-file"</span>)) \</div>
|
|
<div class="line"><a id="l00190" name="l00190"></a><span class="lineno"> 190</span> || (!iter->compare(<span class="stringliteral">"-e"</span>)) || (!iter->compare(<span class="stringliteral">"--estimateN0"</span>)) \</div>
|
|
<div class="line"><a id="l00191" name="l00191"></a><span class="lineno"> 191</span> || (!iter->compare(<span class="stringliteral">"-y"</span>) || (!iter->compare(<span class="stringliteral">"--yaml"</span>))) \</div>
|
|
<div class="line"><a id="l00192" name="l00192"></a><span class="lineno"> 192</span> || (!iter->compare(<span class="stringliteral">"-p"</span>)) || (!iter->compare(<span class="stringliteral">"--per-run-block-chisq"</span>)) \</div>
|
|
<div class="line"><a id="l00193" name="l00193"></a><span class="lineno"> 193</span> || (!iter->compare(<span class="stringliteral">"data"</span>)) || (!iter->substr(0,4).compare(<span class="stringliteral">"msr-"</span>)) || (!iter->compare(<span class="stringliteral">"global"</span>)) \</div>
|
|
<div class="line"><a id="l00194" name="l00194"></a><span class="lineno"> 194</span> || (!iter->compare(<span class="stringliteral">"global+"</span>)) || (!iter->compare(<span class="stringliteral">"global+!"</span>)) || (!iter->compare(<span class="stringliteral">"new"</span>)) \</div>
|
|
<div class="line"><a id="l00195" name="l00195"></a><span class="lineno"> 195</span> || !iter->compare(<span class="stringliteral">"paramList"</span>) )</div>
|
|
<div class="line"><a id="l00196" name="l00196"></a><span class="lineno"> 196</span> word.clear();</div>
|
|
<div class="line"><a id="l00197" name="l00197"></a><span class="lineno"> 197</span> <span class="keywordflow">else</span> <span class="keywordflow">if</span> (!iter->substr(0,2).compare(<span class="stringliteral">"-o"</span>)) {</div>
|
|
<div class="line"><a id="l00198" name="l00198"></a><span class="lineno"> 198</span> word.clear();</div>
|
|
<div class="line"><a id="l00199" name="l00199"></a><span class="lineno"> 199</span> <span class="keywordflow">if</span> (!iter->compare(<span class="stringliteral">"-o"</span>)) {</div>
|
|
<div class="line"><a id="l00200" name="l00200"></a><span class="lineno"> 200</span> <span class="keywordflow">if</span> (++iter == arg.end())</div>
|
|
<div class="line"><a id="l00201" name="l00201"></a><span class="lineno"> 201</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00202" name="l00202"></a><span class="lineno"> 202</span> <span class="keywordflow">else</span></div>
|
|
<div class="line"><a id="l00203" name="l00203"></a><span class="lineno"> 203</span> <span class="keywordflow">continue</span>;</div>
|
|
<div class="line"><a id="l00204" name="l00204"></a><span class="lineno"> 204</span> }</div>
|
|
<div class="line"><a id="l00205" name="l00205"></a><span class="lineno"> 205</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00206" name="l00206"></a><span class="lineno"> 206</span> word = *iter;</div>
|
|
<div class="line"><a id="l00207" name="l00207"></a><span class="lineno"> 207</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00208" name="l00208"></a><span class="lineno"> 208</span> }</div>
|
|
<div class="line"><a id="l00209" name="l00209"></a><span class="lineno"> 209</span> }</div>
|
|
<div class="line"><a id="l00210" name="l00210"></a><span class="lineno"> 210</span> </div>
|
|
<div class="line"><a id="l00211" name="l00211"></a><span class="lineno"> 211</span> <span class="keywordflow">return</span> word;</div>
|
|
<div class="line"><a id="l00212" name="l00212"></a><span class="lineno"> 212</span> </div>
|
|
<div class="line"><a id="l00213" name="l00213"></a><span class="lineno"> 213</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00214" name="l00214"></a><span class="lineno"> 214</span> </div>
|
|
<div class="line"><a id="l00215" name="l00215"></a><span class="lineno"> 215</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00226" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00226" name="l00226"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#a4ad3c3f39fa1eba58e821e784cc72e5e"> 226</a></span>std::string <a class="code hl_function" href="msr2data_8cpp.html#a4ad3c3f39fa1eba58e821e784cc72e5e">msr2data_outputfile</a>(std::vector<std::string> &arg, <span class="keywordtype">bool</span> db = <span class="keyword">true</span>)</div>
|
|
<div class="line"><a id="l00227" name="l00227"></a><span class="lineno"> 227</span>{</div>
|
|
<div class="line"><a id="l00228" name="l00228"></a><span class="lineno"> 228</span> std::string outputFile;</div>
|
|
<div class="line"><a id="l00229" name="l00229"></a><span class="lineno"> 229</span> <span class="keywordflow">if</span> (db)</div>
|
|
<div class="line"><a id="l00230" name="l00230"></a><span class="lineno"> 230</span> outputFile = <span class="stringliteral">"out.db"</span>;</div>
|
|
<div class="line"><a id="l00231" name="l00231"></a><span class="lineno"> 231</span> <span class="keywordflow">else</span></div>
|
|
<div class="line"><a id="l00232" name="l00232"></a><span class="lineno"> 232</span> outputFile = <span class="stringliteral">"out.dat"</span>;</div>
|
|
<div class="line"><a id="l00233" name="l00233"></a><span class="lineno"> 233</span> </div>
|
|
<div class="line"><a id="l00234" name="l00234"></a><span class="lineno"> 234</span> std::vector<std::string>::iterator iterNext(arg.begin());</div>
|
|
<div class="line"><a id="l00235" name="l00235"></a><span class="lineno"> 235</span> <span class="keywordflow">for</span> (std::vector<std::string>::iterator iter(arg.begin()); iter != arg.end(); ++iter) {</div>
|
|
<div class="line"><a id="l00236" name="l00236"></a><span class="lineno"> 236</span> iterNext = iter + 1;</div>
|
|
<div class="line"><a id="l00237" name="l00237"></a><span class="lineno"> 237</span> <span class="keywordflow">if</span> (!iter->substr(0,2).compare(<span class="stringliteral">"-o"</span>)) {</div>
|
|
<div class="line"><a id="l00238" name="l00238"></a><span class="lineno"> 238</span> <span class="keywordflow">if</span> (!iter->compare(<span class="stringliteral">"-o"</span>)) {</div>
|
|
<div class="line"><a id="l00239" name="l00239"></a><span class="lineno"> 239</span> <span class="keywordflow">if</span> ((iterNext != arg.end()) && (iterNext->compare(<span class="stringliteral">"header"</span>)) && (iterNext->compare(<span class="stringliteral">"noheader"</span>)) && (iterNext->compare(<span class="stringliteral">"nosummary"</span>)) \</div>
|
|
<div class="line"><a id="l00240" name="l00240"></a><span class="lineno"> 240</span> && (iterNext->substr(0,3).compare(<span class="stringliteral">"fit"</span>)) && (iterNext->compare(<span class="stringliteral">"-k"</span>)) && (iterNext->compare(<span class="stringliteral">"-t"</span>)) \</div>
|
|
<div class="line"><a id="l00241" name="l00241"></a><span class="lineno"> 241</span> && (iterNext->compare(<span class="stringliteral">"-e"</span>)) && (iterNext->compare(<span class="stringliteral">"-p"</span>)) \</div>
|
|
<div class="line"><a id="l00242" name="l00242"></a><span class="lineno"> 242</span> && (iterNext->compare(<span class="stringliteral">"data"</span>)) && (iterNext->substr(0,3).compare(<span class="stringliteral">"msr"</span>)) && (iterNext->compare(<span class="stringliteral">"global"</span>)) \</div>
|
|
<div class="line"><a id="l00243" name="l00243"></a><span class="lineno"> 243</span> && (iterNext->compare(<span class="stringliteral">"global+"</span>)) && (iterNext->compare(<span class="stringliteral">"global+!"</span>)) && (iterNext->compare(<span class="stringliteral">"new"</span>))) {</div>
|
|
<div class="line"><a id="l00244" name="l00244"></a><span class="lineno"> 244</span> outputFile = *iterNext;</div>
|
|
<div class="line"><a id="l00245" name="l00245"></a><span class="lineno"> 245</span> arg.erase(iterNext);</div>
|
|
<div class="line"><a id="l00246" name="l00246"></a><span class="lineno"> 246</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00247" name="l00247"></a><span class="lineno"> 247</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00248" name="l00248"></a><span class="lineno"> 248</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00249" name="l00249"></a><span class="lineno"> 249</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l00250" name="l00250"></a><span class="lineno"> 250</span> std::cout << <span class="stringliteral">">> msr2data: **WARNING** You did not specify an output file! The default one ("</span> << outputFile << <span class="stringliteral">") will be used."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00251" name="l00251"></a><span class="lineno"> 251</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00252" name="l00252"></a><span class="lineno"> 252</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00253" name="l00253"></a><span class="lineno"> 253</span> }</div>
|
|
<div class="line"><a id="l00254" name="l00254"></a><span class="lineno"> 254</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00255" name="l00255"></a><span class="lineno"> 255</span> outputFile = iter->substr(2);</div>
|
|
<div class="line"><a id="l00256" name="l00256"></a><span class="lineno"> 256</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00257" name="l00257"></a><span class="lineno"> 257</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00258" name="l00258"></a><span class="lineno"> 258</span> }</div>
|
|
<div class="line"><a id="l00259" name="l00259"></a><span class="lineno"> 259</span> }</div>
|
|
<div class="line"><a id="l00260" name="l00260"></a><span class="lineno"> 260</span> }</div>
|
|
<div class="line"><a id="l00261" name="l00261"></a><span class="lineno"> 261</span> </div>
|
|
<div class="line"><a id="l00262" name="l00262"></a><span class="lineno"> 262</span> <span class="keywordflow">return</span> outputFile;</div>
|
|
<div class="line"><a id="l00263" name="l00263"></a><span class="lineno"> 263</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00264" name="l00264"></a><span class="lineno"> 264</span> </div>
|
|
<div class="line"><a id="l00265" name="l00265"></a><span class="lineno"> 265</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00276" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00276" name="l00276"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97"> 276</a></span><span class="keywordtype">bool</span> <a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(std::vector<std::string> &arg, <span class="keyword">const</span> std::string &s)</div>
|
|
<div class="line"><a id="l00277" name="l00277"></a><span class="lineno"> 277</span>{</div>
|
|
<div class="line"><a id="l00278" name="l00278"></a><span class="lineno"> 278</span> <span class="keywordtype">bool</span> option(<span class="keyword">true</span>);</div>
|
|
<div class="line"><a id="l00279" name="l00279"></a><span class="lineno"> 279</span> </div>
|
|
<div class="line"><a id="l00280" name="l00280"></a><span class="lineno"> 280</span> std::vector<std::string>::iterator iter;</div>
|
|
<div class="line"><a id="l00281" name="l00281"></a><span class="lineno"> 281</span> iter = find(arg.begin(), arg.end(), s);</div>
|
|
<div class="line"><a id="l00282" name="l00282"></a><span class="lineno"> 282</span> </div>
|
|
<div class="line"><a id="l00283" name="l00283"></a><span class="lineno"> 283</span> <span class="keywordflow">if</span> (iter != arg.end()) {</div>
|
|
<div class="line"><a id="l00284" name="l00284"></a><span class="lineno"> 284</span> option = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00285" name="l00285"></a><span class="lineno"> 285</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00286" name="l00286"></a><span class="lineno"> 286</span> }</div>
|
|
<div class="line"><a id="l00287" name="l00287"></a><span class="lineno"> 287</span> <span class="keywordflow">return</span> option;</div>
|
|
<div class="line"><a id="l00288" name="l00288"></a><span class="lineno"> 288</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00289" name="l00289"></a><span class="lineno"> 289</span> </div>
|
|
<div class="line"><a id="l00290" name="l00290"></a><span class="lineno"> 290</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00305" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00305" name="l00305"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#a8e4707d1c7ef83a180023a19e83a1965"> 305</a></span><span class="keywordtype">int</span> <a class="code hl_function" href="msr2data_8cpp.html#a8e4707d1c7ef83a180023a19e83a1965">msr2data_doFitting</a>(std::vector<std::string> &arg, <span class="keywordtype">bool</span> &chainfit)</div>
|
|
<div class="line"><a id="l00306" name="l00306"></a><span class="lineno"> 306</span>{</div>
|
|
<div class="line"><a id="l00307" name="l00307"></a><span class="lineno"> 307</span> <span class="keywordtype">int</span> temp(0);</div>
|
|
<div class="line"><a id="l00308" name="l00308"></a><span class="lineno"> 308</span> </div>
|
|
<div class="line"><a id="l00309" name="l00309"></a><span class="lineno"> 309</span> std::string s;</div>
|
|
<div class="line"><a id="l00310" name="l00310"></a><span class="lineno"> 310</span> std::vector<std::string>::iterator iter(arg.begin());</div>
|
|
<div class="line"><a id="l00311" name="l00311"></a><span class="lineno"> 311</span> <span class="keywordflow">while</span> (iter != arg.end()) {</div>
|
|
<div class="line"><a id="l00312" name="l00312"></a><span class="lineno"> 312</span> <span class="keywordflow">if</span> (!iter->compare(<span class="stringliteral">"fit"</span>)) { <span class="comment">// fit found</span></div>
|
|
<div class="line"><a id="l00313" name="l00313"></a><span class="lineno"> 313</span> <span class="keywordflow">if</span> (temp) { <span class="comment">// temp already found previously</span></div>
|
|
<div class="line"><a id="l00314" name="l00314"></a><span class="lineno"> 314</span> <span class="keywordflow">return</span> -2; <span class="comment">// fatal error - another fit-<temp> option is specified</span></div>
|
|
<div class="line"><a id="l00315" name="l00315"></a><span class="lineno"> 315</span> }</div>
|
|
<div class="line"><a id="l00316" name="l00316"></a><span class="lineno"> 316</span> temp = -1; <span class="comment">// fit only, do not prepare input files</span></div>
|
|
<div class="line"><a id="l00317" name="l00317"></a><span class="lineno"> 317</span> chainfit = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00318" name="l00318"></a><span class="lineno"> 318</span> iter = arg.erase(iter);</div>
|
|
<div class="line"><a id="l00319" name="l00319"></a><span class="lineno"> 319</span> }</div>
|
|
<div class="line"><a id="l00320" name="l00320"></a><span class="lineno"> 320</span> <span class="keywordflow">else</span> <span class="keywordflow">if</span> (!iter->substr(0,4).compare(<span class="stringliteral">"fit-"</span>)) { <span class="comment">// 'fit-' found</span></div>
|
|
<div class="line"><a id="l00321" name="l00321"></a><span class="lineno"> 321</span> <span class="keywordflow">if</span> (temp) {</div>
|
|
<div class="line"><a id="l00322" name="l00322"></a><span class="lineno"> 322</span> <span class="keywordflow">return</span> -2; <span class="comment">// fatal error - another fit option is specified</span></div>
|
|
<div class="line"><a id="l00323" name="l00323"></a><span class="lineno"> 323</span> }</div>
|
|
<div class="line"><a id="l00324" name="l00324"></a><span class="lineno"> 324</span> s = iter->substr(4);</div>
|
|
<div class="line"><a id="l00325" name="l00325"></a><span class="lineno"> 325</span> std::string::size_type loc = s.rfind(<span class="charliteral">'!'</span>);</div>
|
|
<div class="line"><a id="l00326" name="l00326"></a><span class="lineno"> 326</span> <span class="keywordflow">if</span> (loc != std::string::npos) {</div>
|
|
<div class="line"><a id="l00327" name="l00327"></a><span class="lineno"> 327</span> chainfit = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00328" name="l00328"></a><span class="lineno"> 328</span> s.erase(loc);</div>
|
|
<div class="line"><a id="l00329" name="l00329"></a><span class="lineno"> 329</span> }</div>
|
|
<div class="line"><a id="l00330" name="l00330"></a><span class="lineno"> 330</span> <span class="keywordflow">else</span></div>
|
|
<div class="line"><a id="l00331" name="l00331"></a><span class="lineno"> 331</span> chainfit = <span class="keyword">true</span>;</div>
|
|
<div class="line"><a id="l00332" name="l00332"></a><span class="lineno"> 332</span> <span class="keywordflow">try</span> {</div>
|
|
<div class="line"><a id="l00333" name="l00333"></a><span class="lineno"> 333</span> temp = boost::lexical_cast<int>(s);</div>
|
|
<div class="line"><a id="l00334" name="l00334"></a><span class="lineno"> 334</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00335" name="l00335"></a><span class="lineno"> 335</span> }</div>
|
|
<div class="line"><a id="l00336" name="l00336"></a><span class="lineno"> 336</span> <span class="keywordflow">catch</span>(boost::bad_lexical_cast &) {</div>
|
|
<div class="line"><a id="l00337" name="l00337"></a><span class="lineno"> 337</span> <span class="keywordflow">return</span> -3; <span class="comment">// the specified template is no number</span></div>
|
|
<div class="line"><a id="l00338" name="l00338"></a><span class="lineno"> 338</span> }</div>
|
|
<div class="line"><a id="l00339" name="l00339"></a><span class="lineno"> 339</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00340" name="l00340"></a><span class="lineno"> 340</span> ++iter;</div>
|
|
<div class="line"><a id="l00341" name="l00341"></a><span class="lineno"> 341</span> }</div>
|
|
<div class="line"><a id="l00342" name="l00342"></a><span class="lineno"> 342</span> }</div>
|
|
<div class="line"><a id="l00343" name="l00343"></a><span class="lineno"> 343</span> </div>
|
|
<div class="line"><a id="l00344" name="l00344"></a><span class="lineno"> 344</span> <span class="keywordflow">return</span> temp;</div>
|
|
<div class="line"><a id="l00345" name="l00345"></a><span class="lineno"> 345</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00346" name="l00346"></a><span class="lineno"> 346</span> </div>
|
|
<div class="line"><a id="l00347" name="l00347"></a><span class="lineno"> 347</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00358" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00358" name="l00358"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#a10ce86209d8c52303e06fdda48f3b0d4"> 358</a></span><span class="keywordtype">int</span> <a class="code hl_function" href="msr2data_8cpp.html#a10ce86209d8c52303e06fdda48f3b0d4">msr2data_doInputCreation</a>(std::vector<std::string> &arg, <span class="keywordtype">bool</span> &inputOnly)</div>
|
|
<div class="line"><a id="l00359" name="l00359"></a><span class="lineno"> 359</span>{</div>
|
|
<div class="line"><a id="l00360" name="l00360"></a><span class="lineno"> 360</span> <span class="keywordtype">int</span> temp(0);</div>
|
|
<div class="line"><a id="l00361" name="l00361"></a><span class="lineno"> 361</span> </div>
|
|
<div class="line"><a id="l00362" name="l00362"></a><span class="lineno"> 362</span> std::string s;</div>
|
|
<div class="line"><a id="l00363" name="l00363"></a><span class="lineno"> 363</span> <span class="keywordflow">for</span> (std::vector<std::string>::iterator iter(arg.begin()); iter != arg.end(); ++iter) {</div>
|
|
<div class="line"><a id="l00364" name="l00364"></a><span class="lineno"> 364</span> <span class="keywordflow">if</span> (!iter->substr(0,4).compare(<span class="stringliteral">"msr-"</span>)) {</div>
|
|
<div class="line"><a id="l00365" name="l00365"></a><span class="lineno"> 365</span> s = iter->substr(4);</div>
|
|
<div class="line"><a id="l00366" name="l00366"></a><span class="lineno"> 366</span> <span class="keywordflow">try</span> {</div>
|
|
<div class="line"><a id="l00367" name="l00367"></a><span class="lineno"> 367</span> temp = boost::lexical_cast<int>(s);</div>
|
|
<div class="line"><a id="l00368" name="l00368"></a><span class="lineno"> 368</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00369" name="l00369"></a><span class="lineno"> 369</span> }</div>
|
|
<div class="line"><a id="l00370" name="l00370"></a><span class="lineno"> 370</span> <span class="keywordflow">catch</span>(boost::bad_lexical_cast &) {</div>
|
|
<div class="line"><a id="l00371" name="l00371"></a><span class="lineno"> 371</span> temp = -3; <span class="comment">// the specified template is no number</span></div>
|
|
<div class="line"><a id="l00372" name="l00372"></a><span class="lineno"> 372</span> }</div>
|
|
<div class="line"><a id="l00373" name="l00373"></a><span class="lineno"> 373</span> inputOnly = <span class="keyword">true</span>;</div>
|
|
<div class="line"><a id="l00374" name="l00374"></a><span class="lineno"> 374</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00375" name="l00375"></a><span class="lineno"> 375</span> }</div>
|
|
<div class="line"><a id="l00376" name="l00376"></a><span class="lineno"> 376</span> }</div>
|
|
<div class="line"><a id="l00377" name="l00377"></a><span class="lineno"> 377</span> </div>
|
|
<div class="line"><a id="l00378" name="l00378"></a><span class="lineno"> 378</span> <span class="keywordflow">return</span> temp;</div>
|
|
<div class="line"><a id="l00379" name="l00379"></a><span class="lineno"> 379</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00380" name="l00380"></a><span class="lineno"> 380</span> </div>
|
|
<div class="line"><a id="l00381" name="l00381"></a><span class="lineno"> 381</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="foldopen" id="foldopen00386" data-start="{" data-end="}">
|
|
<div class="line"><a id="l00386" name="l00386"></a><span class="lineno"><a class="line" href="msr2data_8cpp.html#ae3282f0a3e81896ed307eddba3b1245a"> 386</a></span><span class="keywordtype">int</span> <a class="code hl_function" href="msr2data_8cpp.html#ae3282f0a3e81896ed307eddba3b1245a">msr2data_paramList</a>(std::vector<std::string> &arg, std::vector<unsigned int> &paramList)</div>
|
|
<div class="line"><a id="l00387" name="l00387"></a><span class="lineno"> 387</span>{</div>
|
|
<div class="line"><a id="l00388" name="l00388"></a><span class="lineno"> 388</span> paramList.clear(); <span class="comment">// make sure paramList is empty</span></div>
|
|
<div class="line"><a id="l00389" name="l00389"></a><span class="lineno"> 389</span> </div>
|
|
<div class="line"><a id="l00390" name="l00390"></a><span class="lineno"> 390</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> idx=0;</div>
|
|
<div class="line"><a id="l00391" name="l00391"></a><span class="lineno"> 391</span> <span class="comment">// check if paramList tag is present</span></div>
|
|
<div class="line"><a id="l00392" name="l00392"></a><span class="lineno"> 392</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i=0; i<arg.size(); i++) {</div>
|
|
<div class="line"><a id="l00393" name="l00393"></a><span class="lineno"> 393</span> <span class="keywordflow">if</span> (!arg[i].compare(<span class="stringliteral">"paramList"</span>)) {</div>
|
|
<div class="line"><a id="l00394" name="l00394"></a><span class="lineno"> 394</span> idx = i+1;</div>
|
|
<div class="line"><a id="l00395" name="l00395"></a><span class="lineno"> 395</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00396" name="l00396"></a><span class="lineno"> 396</span> }</div>
|
|
<div class="line"><a id="l00397" name="l00397"></a><span class="lineno"> 397</span> }</div>
|
|
<div class="line"><a id="l00398" name="l00398"></a><span class="lineno"> 398</span> </div>
|
|
<div class="line"><a id="l00399" name="l00399"></a><span class="lineno"> 399</span> <span class="keywordflow">if</span> (idx == 0) { <span class="comment">// paramList tag NOT present</span></div>
|
|
<div class="line"><a id="l00400" name="l00400"></a><span class="lineno"> 400</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00401" name="l00401"></a><span class="lineno"> 401</span> }</div>
|
|
<div class="line"><a id="l00402" name="l00402"></a><span class="lineno"> 402</span> </div>
|
|
<div class="line"><a id="l00403" name="l00403"></a><span class="lineno"> 403</span> <span class="comment">// make sure there are parameter list elements to follow</span></div>
|
|
<div class="line"><a id="l00404" name="l00404"></a><span class="lineno"> 404</span> <span class="keywordflow">if</span> (idx == arg.size()) {</div>
|
|
<div class="line"><a id="l00405" name="l00405"></a><span class="lineno"> 405</span> std::cerr << std::endl << <span class="stringliteral">"**ERROR** found paramList without any arguments!"</span> << std::endl;</div>
|
|
<div class="line"><a id="l00406" name="l00406"></a><span class="lineno"> 406</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00407" name="l00407"></a><span class="lineno"> 407</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00408" name="l00408"></a><span class="lineno"> 408</span> }</div>
|
|
<div class="line"><a id="l00409" name="l00409"></a><span class="lineno"> 409</span> </div>
|
|
<div class="line"><a id="l00410" name="l00410"></a><span class="lineno"> 410</span> <span class="comment">// paramList tag present and further elements present: collect them</span></div>
|
|
<div class="line"><a id="l00411" name="l00411"></a><span class="lineno"> 411</span> std::vector<std::string> str;</div>
|
|
<div class="line"><a id="l00412" name="l00412"></a><span class="lineno"> 412</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> idx_end=0;</div>
|
|
<div class="line"><a id="l00413" name="l00413"></a><span class="lineno"> 413</span> <span class="keywordtype">size_t</span> pos=std::string::npos;</div>
|
|
<div class="line"><a id="l00414" name="l00414"></a><span class="lineno"> 414</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i=idx; i<arg.size(); i++) {</div>
|
|
<div class="line"><a id="l00415" name="l00415"></a><span class="lineno"> 415</span> pos = arg[i].find(<span class="stringliteral">"-"</span>);</div>
|
|
<div class="line"><a id="l00416" name="l00416"></a><span class="lineno"> 416</span> <span class="keywordflow">if</span> (pos == 0) { <span class="comment">// likely something like -o, -k, etc.</span></div>
|
|
<div class="line"><a id="l00417" name="l00417"></a><span class="lineno"> 417</span> idx_end = i;</div>
|
|
<div class="line"><a id="l00418" name="l00418"></a><span class="lineno"> 418</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00419" name="l00419"></a><span class="lineno"> 419</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (pos != std::string::npos) { <span class="comment">// looks like a parameter list like n0-n1</span></div>
|
|
<div class="line"><a id="l00420" name="l00420"></a><span class="lineno"> 420</span> boost::split(str, arg[i], boost::is_any_of(<span class="stringliteral">"-"</span>));</div>
|
|
<div class="line"><a id="l00421" name="l00421"></a><span class="lineno"> 421</span> <span class="keywordflow">if</span> (str.size() != 2) { <span class="comment">// something is wrong, since the structure n0-n1 is expected</span></div>
|
|
<div class="line"><a id="l00422" name="l00422"></a><span class="lineno"> 422</span> std::cerr << std::endl << <span class="stringliteral">"**ERROR** found token "</span> << arg[i] << <span class="stringliteral">" in paramList command which cannot be handled."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00423" name="l00423"></a><span class="lineno"> 423</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00424" name="l00424"></a><span class="lineno"> 424</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00425" name="l00425"></a><span class="lineno"> 425</span> }</div>
|
|
<div class="line"><a id="l00426" name="l00426"></a><span class="lineno"> 426</span> <span class="keywordflow">if</span> (!str[0].compare(<span class="stringliteral">"fit"</span>) || !str[0].compare(<span class="stringliteral">"msr"</span>)) {</div>
|
|
<div class="line"><a id="l00427" name="l00427"></a><span class="lineno"> 427</span> idx_end = i;</div>
|
|
<div class="line"><a id="l00428" name="l00428"></a><span class="lineno"> 428</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00429" name="l00429"></a><span class="lineno"> 429</span> }</div>
|
|
<div class="line"><a id="l00430" name="l00430"></a><span class="lineno"> 430</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a>(str[0]) || !<a class="code hl_function" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a>(str[1])) {</div>
|
|
<div class="line"><a id="l00431" name="l00431"></a><span class="lineno"> 431</span> std::cerr << std::endl << <span class="stringliteral">"**ERROR** found token "</span> << arg[i] << <span class="stringliteral">" in paramList command which cannot be handled."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00432" name="l00432"></a><span class="lineno"> 432</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00433" name="l00433"></a><span class="lineno"> 433</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00434" name="l00434"></a><span class="lineno"> 434</span> }</div>
|
|
<div class="line"><a id="l00435" name="l00435"></a><span class="lineno"> 435</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> start=boost::lexical_cast<unsigned int>(str[0]);</div>
|
|
<div class="line"><a id="l00436" name="l00436"></a><span class="lineno"> 436</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> end=boost::lexical_cast<unsigned int>(str[1]);</div>
|
|
<div class="line"><a id="l00437" name="l00437"></a><span class="lineno"> 437</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> j=start; j<=end; j++)</div>
|
|
<div class="line"><a id="l00438" name="l00438"></a><span class="lineno"> 438</span> paramList.push_back(j);</div>
|
|
<div class="line"><a id="l00439" name="l00439"></a><span class="lineno"> 439</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (<a class="code hl_function" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a>(arg[i])) { <span class="comment">// a single number</span></div>
|
|
<div class="line"><a id="l00440" name="l00440"></a><span class="lineno"> 440</span> paramList.push_back(boost::lexical_cast<unsigned int>(arg[i]));</div>
|
|
<div class="line"><a id="l00441" name="l00441"></a><span class="lineno"> 441</span> } <span class="keywordflow">else</span> { <span class="comment">// likely the next argument not related to paramList</span></div>
|
|
<div class="line"><a id="l00442" name="l00442"></a><span class="lineno"> 442</span> idx_end = i;</div>
|
|
<div class="line"><a id="l00443" name="l00443"></a><span class="lineno"> 443</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00444" name="l00444"></a><span class="lineno"> 444</span> }</div>
|
|
<div class="line"><a id="l00445" name="l00445"></a><span class="lineno"> 445</span> }</div>
|
|
<div class="line"><a id="l00446" name="l00446"></a><span class="lineno"> 446</span> <span class="keywordflow">if</span> (idx_end == 0)</div>
|
|
<div class="line"><a id="l00447" name="l00447"></a><span class="lineno"> 447</span> idx_end = arg.size();</div>
|
|
<div class="line"><a id="l00448" name="l00448"></a><span class="lineno"> 448</span> </div>
|
|
<div class="line"><a id="l00449" name="l00449"></a><span class="lineno"> 449</span> <span class="comment">// remove all the paramList arguments for arg</span></div>
|
|
<div class="line"><a id="l00450" name="l00450"></a><span class="lineno"> 450</span> arg.erase(arg.begin()+idx-1, arg.begin()+idx_end);</div>
|
|
<div class="line"><a id="l00451" name="l00451"></a><span class="lineno"> 451</span> </div>
|
|
<div class="line"><a id="l00452" name="l00452"></a><span class="lineno"> 452</span> <span class="comment">// go through the parameter list and make sure the values are unique</span></div>
|
|
<div class="line"><a id="l00453" name="l00453"></a><span class="lineno"> 453</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i=0; i<paramList.size(); i++) {</div>
|
|
<div class="line"><a id="l00454" name="l00454"></a><span class="lineno"> 454</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> j=i+1; j<paramList.size(); j++) {</div>
|
|
<div class="line"><a id="l00455" name="l00455"></a><span class="lineno"> 455</span> <span class="keywordflow">if</span> (paramList[i] == paramList[j]) {</div>
|
|
<div class="line"><a id="l00456" name="l00456"></a><span class="lineno"> 456</span> std::cerr << std::endl << <span class="stringliteral">"**ERROR** the parameter list numbers have to be unique. Found "</span> << paramList[i] << <span class="stringliteral">" at least 2 times."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00457" name="l00457"></a><span class="lineno"> 457</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00458" name="l00458"></a><span class="lineno"> 458</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00459" name="l00459"></a><span class="lineno"> 459</span> }</div>
|
|
<div class="line"><a id="l00460" name="l00460"></a><span class="lineno"> 460</span> }</div>
|
|
<div class="line"><a id="l00461" name="l00461"></a><span class="lineno"> 461</span> }</div>
|
|
<div class="line"><a id="l00462" name="l00462"></a><span class="lineno"> 462</span> </div>
|
|
<div class="line"><a id="l00463" name="l00463"></a><span class="lineno"> 463</span> <span class="keywordflow">return</span> paramList.size();</div>
|
|
<div class="line"><a id="l00464" name="l00464"></a><span class="lineno"> 464</span>}</div>
|
|
</div>
|
|
<div class="line"><a id="l00465" name="l00465"></a><span class="lineno"> 465</span> </div>
|
|
<div class="line"><a id="l00466" name="l00466"></a><span class="lineno"> 466</span><span class="comment">//--------------------------------------------------------------------------</span></div>
|
|
<div class="line"><a id="l00478" name="l00478"></a><span class="lineno"> 478</span><span class="keywordtype">int</span> <a class="code hl_function" href="addRun_8cpp.html#a0ddf1224851353fc92bfbff6f499fa97">main</a>(<span class="keywordtype">int</span> argc, <span class="keywordtype">char</span> *argv[])</div>
|
|
<div class="line"><a id="l00479" name="l00479"></a><span class="lineno"> 479</span>{</div>
|
|
<div class="line"><a id="l00480" name="l00480"></a><span class="lineno"> 480</span> <span class="comment">// check if version dump is wanted</span></div>
|
|
<div class="line"><a id="l00481" name="l00481"></a><span class="lineno"> 481</span> <span class="keywordflow">if</span> (argc == 2) {</div>
|
|
<div class="line"><a id="l00482" name="l00482"></a><span class="lineno"> 482</span> <span class="keywordflow">if</span> (!strcmp(argv[1], <span class="stringliteral">"--help"</span>)) {</div>
|
|
<div class="line"><a id="l00483" name="l00483"></a><span class="lineno"> 483</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00484" name="l00484"></a><span class="lineno"> 484</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00485" name="l00485"></a><span class="lineno"> 485</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (!strcmp(argv[1], <span class="stringliteral">"--version"</span>)) {</div>
|
|
<div class="line"><a id="l00486" name="l00486"></a><span class="lineno"> 486</span><span class="preprocessor">#ifdef HAVE_CONFIG_H</span></div>
|
|
<div class="line"><a id="l00487" name="l00487"></a><span class="lineno"> 487</span><span class="preprocessor">#ifdef HAVE_GIT_REV_H</span></div>
|
|
<div class="line"><a id="l00488" name="l00488"></a><span class="lineno"> 488</span> std::cout << std::endl << <span class="stringliteral">"msr2data version: "</span> << PACKAGE_VERSION << <span class="stringliteral">", git-branch: "</span> << GIT_BRANCH << <span class="stringliteral">", git-rev: "</span> << GIT_CURRENT_SHA1 << <span class="stringliteral">" ("</span> << BUILD_TYPE << <span class="stringliteral">"), ROOT version: "</span> << ROOT_VERSION_USED << std::endl << std::endl;</div>
|
|
<div class="line"><a id="l00489" name="l00489"></a><span class="lineno"> 489</span><span class="preprocessor">#else</span></div>
|
|
<div class="line"><a id="l00490" name="l00490"></a><span class="lineno"> 490</span> std::cout << std::endl << <span class="stringliteral">"msr2data version: "</span> << PACKAGE_VERSION << <span class="stringliteral">" ("</span> << BUILD_TYPE << <span class="stringliteral">"), ROOT version: "</span> << ROOT_VERSION_USED << std::endl << std::endl;</div>
|
|
<div class="line"><a id="l00491" name="l00491"></a><span class="lineno"> 491</span><span class="preprocessor">#endif</span></div>
|
|
<div class="line"><a id="l00492" name="l00492"></a><span class="lineno"> 492</span><span class="preprocessor">#else</span></div>
|
|
<div class="line"><a id="l00493" name="l00493"></a><span class="lineno"> 493</span><span class="preprocessor">#ifdef HAVE_GIT_REV_H</span></div>
|
|
<div class="line"><a id="l00494" name="l00494"></a><span class="lineno"> 494</span> std::cout << std::endl << <span class="stringliteral">"msr2data git-branch: "</span> << GIT_BRANCH << <span class="stringliteral">", git-rev: "</span> << GIT_CURRENT_SHA1 << std::endl << std::endl;</div>
|
|
<div class="line"><a id="l00495" name="l00495"></a><span class="lineno"> 495</span><span class="preprocessor">#else</span></div>
|
|
<div class="line"><a id="l00496" name="l00496"></a><span class="lineno"> 496</span> std::cout << std::endl << <span class="stringliteral">"msr2data version: unknown."</span> << std::endl << std::endl;</div>
|
|
<div class="line"><a id="l00497" name="l00497"></a><span class="lineno"> 497</span><span class="preprocessor">#endif</span></div>
|
|
<div class="line"><a id="l00498" name="l00498"></a><span class="lineno"> 498</span><span class="preprocessor">#endif</span></div>
|
|
<div class="line"><a id="l00499" name="l00499"></a><span class="lineno"> 499</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00500" name="l00500"></a><span class="lineno"> 500</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00501" name="l00501"></a><span class="lineno"> 501</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00502" name="l00502"></a><span class="lineno"> 502</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00503" name="l00503"></a><span class="lineno"> 503</span> }</div>
|
|
<div class="line"><a id="l00504" name="l00504"></a><span class="lineno"> 504</span> }</div>
|
|
<div class="line"><a id="l00505" name="l00505"></a><span class="lineno"> 505</span> </div>
|
|
<div class="line"><a id="l00506" name="l00506"></a><span class="lineno"> 506</span> <span class="comment">// check the number of arguments</span></div>
|
|
<div class="line"><a id="l00507" name="l00507"></a><span class="lineno"> 507</span> <span class="keywordflow">if</span> (argc < 2) {</div>
|
|
<div class="line"><a id="l00508" name="l00508"></a><span class="lineno"> 508</span> <a class="code hl_function" href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a>();</div>
|
|
<div class="line"><a id="l00509" name="l00509"></a><span class="lineno"> 509</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00510" name="l00510"></a><span class="lineno"> 510</span> }</div>
|
|
<div class="line"><a id="l00511" name="l00511"></a><span class="lineno"> 511</span> </div>
|
|
<div class="line"><a id="l00512" name="l00512"></a><span class="lineno"> 512</span> <span class="comment">// use a string-vector for the arguments to get rid of char* as far as possible...</span></div>
|
|
<div class="line"><a id="l00513" name="l00513"></a><span class="lineno"> 513</span> std::vector<std::string> arg;</div>
|
|
<div class="line"><a id="l00514" name="l00514"></a><span class="lineno"> 514</span> <span class="keywordflow">for</span> (<span class="keywordtype">int</span> i(1); i<argc; ++i) {</div>
|
|
<div class="line"><a id="l00515" name="l00515"></a><span class="lineno"> 515</span> arg.push_back(argv[i]);</div>
|
|
<div class="line"><a id="l00516" name="l00516"></a><span class="lineno"> 516</span> }</div>
|
|
<div class="line"><a id="l00517" name="l00517"></a><span class="lineno"> 517</span> </div>
|
|
<div class="line"><a id="l00518" name="l00518"></a><span class="lineno"> 518</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> runTAG;</div>
|
|
<div class="line"><a id="l00519" name="l00519"></a><span class="lineno"> 519</span> std::vector<unsigned int> run_vec;</div>
|
|
<div class="line"><a id="l00520" name="l00520"></a><span class="lineno"> 520</span> std::string run_list;</div>
|
|
<div class="line"><a id="l00521" name="l00521"></a><span class="lineno"> 521</span> std::string msrExtension;</div>
|
|
<div class="line"><a id="l00522" name="l00522"></a><span class="lineno"> 522</span> std::vector<unsigned int> param_vec;</div>
|
|
<div class="line"><a id="l00523" name="l00523"></a><span class="lineno"> 523</span> </div>
|
|
<div class="line"><a id="l00524" name="l00524"></a><span class="lineno"> 524</span> <span class="keywordflow">try</span> {</div>
|
|
<div class="line"><a id="l00525" name="l00525"></a><span class="lineno"> 525</span> <span class="keywordflow">if</span> (arg[0].at(0) == <span class="charliteral">'['</span>) { <span class="comment">// In case a list of runs is given by [...]</span></div>
|
|
<div class="line"><a id="l00526" name="l00526"></a><span class="lineno"> 526</span> runTAG = 1;</div>
|
|
<div class="line"><a id="l00527" name="l00527"></a><span class="lineno"> 527</span> </div>
|
|
<div class="line"><a id="l00528" name="l00528"></a><span class="lineno"> 528</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> firstRunNumberInArg(0), lastRunNumberInArg(0);</div>
|
|
<div class="line"><a id="l00529" name="l00529"></a><span class="lineno"> 529</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> rightbracket(std::numeric_limits<unsigned int>::max());</div>
|
|
<div class="line"><a id="l00530" name="l00530"></a><span class="lineno"> 530</span> </div>
|
|
<div class="line"><a id="l00531" name="l00531"></a><span class="lineno"> 531</span> <span class="keywordflow">if</span> (!arg[0].compare(<span class="stringliteral">"["</span>))</div>
|
|
<div class="line"><a id="l00532" name="l00532"></a><span class="lineno"> 532</span> firstRunNumberInArg = 1;</div>
|
|
<div class="line"><a id="l00533" name="l00533"></a><span class="lineno"> 533</span> <span class="keywordflow">else</span></div>
|
|
<div class="line"><a id="l00534" name="l00534"></a><span class="lineno"> 534</span> arg[0]=arg[0].substr(1);</div>
|
|
<div class="line"><a id="l00535" name="l00535"></a><span class="lineno"> 535</span> </div>
|
|
<div class="line"><a id="l00536" name="l00536"></a><span class="lineno"> 536</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(firstRunNumberInArg); i<arg.size(); ++i) {</div>
|
|
<div class="line"><a id="l00537" name="l00537"></a><span class="lineno"> 537</span> std::string::size_type loc = arg[i].rfind(<span class="charliteral">']'</span>);</div>
|
|
<div class="line"><a id="l00538" name="l00538"></a><span class="lineno"> 538</span> <span class="keywordflow">if</span> ( loc != std::string::npos ) {</div>
|
|
<div class="line"><a id="l00539" name="l00539"></a><span class="lineno"> 539</span> rightbracket = i;</div>
|
|
<div class="line"><a id="l00540" name="l00540"></a><span class="lineno"> 540</span> <span class="keywordflow">if</span> (!arg[i].compare(<span class="stringliteral">"]"</span>) && i > 0)</div>
|
|
<div class="line"><a id="l00541" name="l00541"></a><span class="lineno"> 541</span> lastRunNumberInArg = i-1;</div>
|
|
<div class="line"><a id="l00542" name="l00542"></a><span class="lineno"> 542</span> <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00543" name="l00543"></a><span class="lineno"> 543</span> arg[i]=arg[i].substr(0,loc);</div>
|
|
<div class="line"><a id="l00544" name="l00544"></a><span class="lineno"> 544</span> lastRunNumberInArg = i;</div>
|
|
<div class="line"><a id="l00545" name="l00545"></a><span class="lineno"> 545</span> }</div>
|
|
<div class="line"><a id="l00546" name="l00546"></a><span class="lineno"> 546</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00547" name="l00547"></a><span class="lineno"> 547</span> }</div>
|
|
<div class="line"><a id="l00548" name="l00548"></a><span class="lineno"> 548</span> }</div>
|
|
<div class="line"><a id="l00549" name="l00549"></a><span class="lineno"> 549</span> <span class="keywordflow">if</span> (rightbracket == std::numeric_limits<unsigned int>::max()) {</div>
|
|
<div class="line"><a id="l00550" name="l00550"></a><span class="lineno"> 550</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00551" name="l00551"></a><span class="lineno"> 551</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** You used the list specification without closing bracket (])! Quitting now."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00552" name="l00552"></a><span class="lineno"> 552</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00553" name="l00553"></a><span class="lineno"> 553</span> }</div>
|
|
<div class="line"><a id="l00554" name="l00554"></a><span class="lineno"> 554</span> </div>
|
|
<div class="line"><a id="l00555" name="l00555"></a><span class="lineno"> 555</span> <span class="comment">// generate run_list string</span></div>
|
|
<div class="line"><a id="l00556" name="l00556"></a><span class="lineno"> 556</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(firstRunNumberInArg); i<=lastRunNumberInArg; ++i) {</div>
|
|
<div class="line"><a id="l00557" name="l00557"></a><span class="lineno"> 557</span> run_list += arg[i] + <span class="stringliteral">" "</span>;</div>
|
|
<div class="line"><a id="l00558" name="l00558"></a><span class="lineno"> 558</span> }</div>
|
|
<div class="line"><a id="l00559" name="l00559"></a><span class="lineno"> 559</span> <span class="comment">// parse run_list string</span></div>
|
|
<div class="line"><a id="l00560" name="l00560"></a><span class="lineno"> 560</span> std::unique_ptr<PStringNumberList> nl = std::make_unique<PStringNumberList>(run_list);</div>
|
|
<div class="line"><a id="l00561" name="l00561"></a><span class="lineno"> 561</span> std::string errorMsg(<span class="stringliteral">""</span>);</div>
|
|
<div class="line"><a id="l00562" name="l00562"></a><span class="lineno"> 562</span> <span class="keywordflow">if</span> (!nl->Parse(errorMsg)) {</div>
|
|
<div class="line"><a id="l00563" name="l00563"></a><span class="lineno"> 563</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00564" name="l00564"></a><span class="lineno"> 564</span> std::cerr << <span class="stringliteral">">> msr2data: "</span> << errorMsg << <span class="stringliteral">" - Quitting now."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00565" name="l00565"></a><span class="lineno"> 565</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00566" name="l00566"></a><span class="lineno"> 566</span> }</div>
|
|
<div class="line"><a id="l00567" name="l00567"></a><span class="lineno"> 567</span> <span class="comment">// get run list vector</span></div>
|
|
<div class="line"><a id="l00568" name="l00568"></a><span class="lineno"> 568</span> run_vec = nl->GetList();</div>
|
|
<div class="line"><a id="l00569" name="l00569"></a><span class="lineno"> 569</span> </div>
|
|
<div class="line"><a id="l00570" name="l00570"></a><span class="lineno"> 570</span> msrExtension = arg[rightbracket + 1];</div>
|
|
<div class="line"><a id="l00571" name="l00571"></a><span class="lineno"> 571</span> </div>
|
|
<div class="line"><a id="l00572" name="l00572"></a><span class="lineno"> 572</span> std::vector<std::string>::iterator iter(arg.begin());</div>
|
|
<div class="line"><a id="l00573" name="l00573"></a><span class="lineno"> 573</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(0); i<rightbracket + 2; ++i) {</div>
|
|
<div class="line"><a id="l00574" name="l00574"></a><span class="lineno"> 574</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00575" name="l00575"></a><span class="lineno"> 575</span> iter = arg.begin();</div>
|
|
<div class="line"><a id="l00576" name="l00576"></a><span class="lineno"> 576</span> }</div>
|
|
<div class="line"><a id="l00577" name="l00577"></a><span class="lineno"> 577</span> </div>
|
|
<div class="line"><a id="l00578" name="l00578"></a><span class="lineno"> 578</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00579" name="l00579"></a><span class="lineno"> 579</span> <span class="keywordtype">bool</span> argOneIsNumber(<a class="code hl_function" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a>(arg[0])), argTwoIsNumber(<a class="code hl_function" href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a>(arg[1]));</div>
|
|
<div class="line"><a id="l00580" name="l00580"></a><span class="lineno"> 580</span> </div>
|
|
<div class="line"><a id="l00581" name="l00581"></a><span class="lineno"> 581</span> <span class="keywordflow">if</span> (argOneIsNumber && argTwoIsNumber) { <span class="comment">// the first two arguments are numbers: an interval of numbers is given</span></div>
|
|
<div class="line"><a id="l00582" name="l00582"></a><span class="lineno"> 582</span> runTAG = 2;</div>
|
|
<div class="line"><a id="l00583" name="l00583"></a><span class="lineno"> 583</span> </div>
|
|
<div class="line"><a id="l00584" name="l00584"></a><span class="lineno"> 584</span> <span class="keywordflow">if</span> (arg.size() < 3) {</div>
|
|
<div class="line"><a id="l00585" name="l00585"></a><span class="lineno"> 585</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00586" name="l00586"></a><span class="lineno"> 586</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** No msr-file extension specified! Quitting now..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00587" name="l00587"></a><span class="lineno"> 587</span> run_vec.clear();</div>
|
|
<div class="line"><a id="l00588" name="l00588"></a><span class="lineno"> 588</span> arg.clear();</div>
|
|
<div class="line"><a id="l00589" name="l00589"></a><span class="lineno"> 589</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00590" name="l00590"></a><span class="lineno"> 590</span> }</div>
|
|
<div class="line"><a id="l00591" name="l00591"></a><span class="lineno"> 591</span> </div>
|
|
<div class="line"><a id="l00592" name="l00592"></a><span class="lineno"> 592</span> run_vec.push_back(boost::lexical_cast<unsigned int>(arg[0]));</div>
|
|
<div class="line"><a id="l00593" name="l00593"></a><span class="lineno"> 593</span> run_vec.push_back(boost::lexical_cast<unsigned int>(arg[1]));</div>
|
|
<div class="line"><a id="l00594" name="l00594"></a><span class="lineno"> 594</span> </div>
|
|
<div class="line"><a id="l00595" name="l00595"></a><span class="lineno"> 595</span> msrExtension = arg[2];</div>
|
|
<div class="line"><a id="l00596" name="l00596"></a><span class="lineno"> 596</span> </div>
|
|
<div class="line"><a id="l00597" name="l00597"></a><span class="lineno"> 597</span> std::vector<std::string>::iterator iter(arg.begin());</div>
|
|
<div class="line"><a id="l00598" name="l00598"></a><span class="lineno"> 598</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(0); i < 3; i++) {</div>
|
|
<div class="line"><a id="l00599" name="l00599"></a><span class="lineno"> 599</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00600" name="l00600"></a><span class="lineno"> 600</span> iter = arg.begin();</div>
|
|
<div class="line"><a id="l00601" name="l00601"></a><span class="lineno"> 601</span> }</div>
|
|
<div class="line"><a id="l00602" name="l00602"></a><span class="lineno"> 602</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (argOneIsNumber && !argTwoIsNumber) { <span class="comment">// only one run number is given</span></div>
|
|
<div class="line"><a id="l00603" name="l00603"></a><span class="lineno"> 603</span> runTAG = 3;</div>
|
|
<div class="line"><a id="l00604" name="l00604"></a><span class="lineno"> 604</span> run_vec.push_back(boost::lexical_cast<unsigned int>(arg[0]));</div>
|
|
<div class="line"><a id="l00605" name="l00605"></a><span class="lineno"> 605</span> msrExtension = arg[1];</div>
|
|
<div class="line"><a id="l00606" name="l00606"></a><span class="lineno"> 606</span> </div>
|
|
<div class="line"><a id="l00607" name="l00607"></a><span class="lineno"> 607</span> std::vector<std::string>::iterator iter(arg.begin());</div>
|
|
<div class="line"><a id="l00608" name="l00608"></a><span class="lineno"> 608</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(0); i < 2; i++) {</div>
|
|
<div class="line"><a id="l00609" name="l00609"></a><span class="lineno"> 609</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00610" name="l00610"></a><span class="lineno"> 610</span> iter = arg.begin();</div>
|
|
<div class="line"><a id="l00611" name="l00611"></a><span class="lineno"> 611</span> }</div>
|
|
<div class="line"><a id="l00612" name="l00612"></a><span class="lineno"> 612</span> } <span class="keywordflow">else</span> { <span class="comment">// assume a runlist-file with "independent variables" is given</span></div>
|
|
<div class="line"><a id="l00613" name="l00613"></a><span class="lineno"> 613</span> runTAG = 4;</div>
|
|
<div class="line"><a id="l00614" name="l00614"></a><span class="lineno"> 614</span> run_list = arg[0];</div>
|
|
<div class="line"><a id="l00615" name="l00615"></a><span class="lineno"> 615</span> msrExtension = arg[1];</div>
|
|
<div class="line"><a id="l00616" name="l00616"></a><span class="lineno"> 616</span> </div>
|
|
<div class="line"><a id="l00617" name="l00617"></a><span class="lineno"> 617</span> std::vector<std::string>::iterator iter(arg.begin());</div>
|
|
<div class="line"><a id="l00618" name="l00618"></a><span class="lineno"> 618</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(0); i < 2; i++) {</div>
|
|
<div class="line"><a id="l00619" name="l00619"></a><span class="lineno"> 619</span> arg.erase(iter);</div>
|
|
<div class="line"><a id="l00620" name="l00620"></a><span class="lineno"> 620</span> iter = arg.begin();</div>
|
|
<div class="line"><a id="l00621" name="l00621"></a><span class="lineno"> 621</span> }</div>
|
|
<div class="line"><a id="l00622" name="l00622"></a><span class="lineno"> 622</span> }</div>
|
|
<div class="line"><a id="l00623" name="l00623"></a><span class="lineno"> 623</span> }</div>
|
|
<div class="line"><a id="l00624" name="l00624"></a><span class="lineno"> 624</span> }</div>
|
|
<div class="line"><a id="l00625" name="l00625"></a><span class="lineno"> 625</span> <span class="keywordflow">catch</span>(boost::bad_lexical_cast &) {</div>
|
|
<div class="line"><a id="l00626" name="l00626"></a><span class="lineno"> 626</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00627" name="l00627"></a><span class="lineno"> 627</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** At least one given run number is out of range! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00628" name="l00628"></a><span class="lineno"> 628</span> run_vec.clear();</div>
|
|
<div class="line"><a id="l00629" name="l00629"></a><span class="lineno"> 629</span> arg.clear();</div>
|
|
<div class="line"><a id="l00630" name="l00630"></a><span class="lineno"> 630</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00631" name="l00631"></a><span class="lineno"> 631</span> }</div>
|
|
<div class="line"><a id="l00632" name="l00632"></a><span class="lineno"> 632</span> </div>
|
|
<div class="line"><a id="l00633" name="l00633"></a><span class="lineno"> 633</span> <span class="comment">// check if parameter list is given</span></div>
|
|
<div class="line"><a id="l00634" name="l00634"></a><span class="lineno"> 634</span> <span class="keywordtype">int</span> noParamList(<a class="code hl_function" href="msr2data_8cpp.html#ae3282f0a3e81896ed307eddba3b1245a">msr2data_paramList</a>(arg, param_vec));</div>
|
|
<div class="line"><a id="l00635" name="l00635"></a><span class="lineno"> 635</span> <span class="keywordflow">if</span> (noParamList == -1) {</div>
|
|
<div class="line"><a id="l00636" name="l00636"></a><span class="lineno"> 636</span> arg.clear();</div>
|
|
<div class="line"><a id="l00637" name="l00637"></a><span class="lineno"> 637</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00638" name="l00638"></a><span class="lineno"> 638</span> }</div>
|
|
<div class="line"><a id="l00639" name="l00639"></a><span class="lineno"> 639</span> </div>
|
|
<div class="line"><a id="l00640" name="l00640"></a><span class="lineno"> 640</span> <span class="comment">// check the validity of the command line given command line arguments</span></div>
|
|
<div class="line"><a id="l00641" name="l00641"></a><span class="lineno"> 641</span> std::string wrongArgument(<a class="code hl_function" href="msr2data_8cpp.html#a7d3987fc1f326133c36ffd551acbc716">msr2data_validArguments</a>(arg));</div>
|
|
<div class="line"><a id="l00642" name="l00642"></a><span class="lineno"> 642</span> <span class="keywordflow">if</span> (!wrongArgument.empty()) {</div>
|
|
<div class="line"><a id="l00643" name="l00643"></a><span class="lineno"> 643</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00644" name="l00644"></a><span class="lineno"> 644</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** Unknown argument: "</span> << wrongArgument << <span class="stringliteral">". Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00645" name="l00645"></a><span class="lineno"> 645</span> run_vec.clear();</div>
|
|
<div class="line"><a id="l00646" name="l00646"></a><span class="lineno"> 646</span> arg.clear();</div>
|
|
<div class="line"><a id="l00647" name="l00647"></a><span class="lineno"> 647</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00648" name="l00648"></a><span class="lineno"> 648</span> }</div>
|
|
<div class="line"><a id="l00649" name="l00649"></a><span class="lineno"> 649</span> </div>
|
|
<div class="line"><a id="l00650" name="l00650"></a><span class="lineno"> 650</span> <span class="comment">// check if the output format is DB or data</span></div>
|
|
<div class="line"><a id="l00651" name="l00651"></a><span class="lineno"> 651</span> <span class="keywordtype">bool</span> db(<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"data"</span>));</div>
|
|
<div class="line"><a id="l00652" name="l00652"></a><span class="lineno"> 652</span> </div>
|
|
<div class="line"><a id="l00653" name="l00653"></a><span class="lineno"> 653</span> <span class="comment">// check the arguments for the "-o" option and set the output filename</span></div>
|
|
<div class="line"><a id="l00654" name="l00654"></a><span class="lineno"> 654</span> std::string outputFile(<a class="code hl_function" href="msr2data_8cpp.html#a4ad3c3f39fa1eba58e821e784cc72e5e">msr2data_outputfile</a>(arg, db));</div>
|
|
<div class="line"><a id="l00655" name="l00655"></a><span class="lineno"> 655</span> </div>
|
|
<div class="line"><a id="l00656" name="l00656"></a><span class="lineno"> 656</span> <span class="comment">// introduce check, if no output should be generated - in that case we do not need msrfile and rundata handlers later</span></div>
|
|
<div class="line"><a id="l00657" name="l00657"></a><span class="lineno"> 657</span> <span class="keywordtype">bool</span> realOutput(<span class="keyword">true</span>);</div>
|
|
<div class="line"><a id="l00658" name="l00658"></a><span class="lineno"> 658</span> <span class="keywordflow">if</span> (!boost::algorithm::to_lower_copy(outputFile).compare(<span class="stringliteral">"none"</span>))</div>
|
|
<div class="line"><a id="l00659" name="l00659"></a><span class="lineno"> 659</span> realOutput = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00660" name="l00660"></a><span class="lineno"> 660</span> </div>
|
|
<div class="line"><a id="l00661" name="l00661"></a><span class="lineno"> 661</span> <span class="comment">// create the msr2data-object and set the run numbers according to the runTAG above</span></div>
|
|
<div class="line"><a id="l00662" name="l00662"></a><span class="lineno"> 662</span> std::unique_ptr<PMsr2Data> msr2dataHandler = std::make_unique<PMsr2Data>(msrExtension);</div>
|
|
<div class="line"><a id="l00663" name="l00663"></a><span class="lineno"> 663</span> </div>
|
|
<div class="line"><a id="l00664" name="l00664"></a><span class="lineno"> 664</span> <span class="keywordtype">int</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00665" name="l00665"></a><span class="lineno"> 665</span> </div>
|
|
<div class="line"><a id="l00666" name="l00666"></a><span class="lineno"> 666</span> <span class="keywordflow">switch</span>(runTAG) {</div>
|
|
<div class="line"><a id="l00667" name="l00667"></a><span class="lineno"> 667</span> <span class="keywordflow">case</span> 1:</div>
|
|
<div class="line"><a id="l00668" name="l00668"></a><span class="lineno"> 668</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->SetRunNumbers(run_vec);</div>
|
|
<div class="line"><a id="l00669" name="l00669"></a><span class="lineno"> 669</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00670" name="l00670"></a><span class="lineno"> 670</span> <span class="keywordflow">case</span> 2:</div>
|
|
<div class="line"><a id="l00671" name="l00671"></a><span class="lineno"> 671</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->SetRunNumbers(run_vec[0], run_vec[1]);</div>
|
|
<div class="line"><a id="l00672" name="l00672"></a><span class="lineno"> 672</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00673" name="l00673"></a><span class="lineno"> 673</span> <span class="keywordflow">case</span> 3:</div>
|
|
<div class="line"><a id="l00674" name="l00674"></a><span class="lineno"> 674</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->SetRunNumbers(run_vec[0]);</div>
|
|
<div class="line"><a id="l00675" name="l00675"></a><span class="lineno"> 675</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00676" name="l00676"></a><span class="lineno"> 676</span> <span class="keywordflow">case</span> 4:</div>
|
|
<div class="line"><a id="l00677" name="l00677"></a><span class="lineno"> 677</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->SetRunNumbers(run_list);</div>
|
|
<div class="line"><a id="l00678" name="l00678"></a><span class="lineno"> 678</span> <span class="keywordflow">break</span>;</div>
|
|
<div class="line"><a id="l00679" name="l00679"></a><span class="lineno"> 679</span> <span class="keywordflow">default</span>:</div>
|
|
<div class="line"><a id="l00680" name="l00680"></a><span class="lineno"> 680</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00681" name="l00681"></a><span class="lineno"> 681</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** None of the possible run list specifications has been detected! Quitting now..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00682" name="l00682"></a><span class="lineno"> 682</span> <span class="keywordflow">return</span> 0;</div>
|
|
<div class="line"><a id="l00683" name="l00683"></a><span class="lineno"> 683</span> }</div>
|
|
<div class="line"><a id="l00684" name="l00684"></a><span class="lineno"> 684</span> </div>
|
|
<div class="line"><a id="l00685" name="l00685"></a><span class="lineno"> 685</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> == 1) {</div>
|
|
<div class="line"><a id="l00686" name="l00686"></a><span class="lineno"> 686</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00687" name="l00687"></a><span class="lineno"> 687</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** The run numbers are out of range! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00688" name="l00688"></a><span class="lineno"> 688</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00689" name="l00689"></a><span class="lineno"> 689</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> == -1) {</div>
|
|
<div class="line"><a id="l00690" name="l00690"></a><span class="lineno"> 690</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00691" name="l00691"></a><span class="lineno"> 691</span> }</div>
|
|
<div class="line"><a id="l00692" name="l00692"></a><span class="lineno"> 692</span> </div>
|
|
<div class="line"><a id="l00693" name="l00693"></a><span class="lineno"> 693</span> run_vec.clear();</div>
|
|
<div class="line"><a id="l00694" name="l00694"></a><span class="lineno"> 694</span> </div>
|
|
<div class="line"><a id="l00695" name="l00695"></a><span class="lineno"> 695</span> <span class="comment">// check if fitting should be done and in case, which template run number to use</span></div>
|
|
<div class="line"><a id="l00696" name="l00696"></a><span class="lineno"> 696</span> <span class="keywordtype">int</span> temp(0);</div>
|
|
<div class="line"><a id="l00697" name="l00697"></a><span class="lineno"> 697</span> <span class="keywordtype">bool</span> chainfit(<span class="keyword">true</span>), onlyInputCreation(<span class="keyword">false</span>);</div>
|
|
<div class="line"><a id="l00698" name="l00698"></a><span class="lineno"> 698</span> std::string musrfitOptions;</div>
|
|
<div class="line"><a id="l00699" name="l00699"></a><span class="lineno"> 699</span> </div>
|
|
<div class="line"><a id="l00700" name="l00700"></a><span class="lineno"> 700</span> temp = <a class="code hl_function" href="msr2data_8cpp.html#a8e4707d1c7ef83a180023a19e83a1965">msr2data_doFitting</a>(arg, chainfit);</div>
|
|
<div class="line"><a id="l00701" name="l00701"></a><span class="lineno"> 701</span> </div>
|
|
<div class="line"><a id="l00702" name="l00702"></a><span class="lineno"> 702</span> <span class="keywordflow">if</span> (temp == -2) {</div>
|
|
<div class="line"><a id="l00703" name="l00703"></a><span class="lineno"> 703</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00704" name="l00704"></a><span class="lineno"> 704</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** More than one fitting options are specified! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00705" name="l00705"></a><span class="lineno"> 705</span> <span class="keywordflow">return</span> temp;</div>
|
|
<div class="line"><a id="l00706" name="l00706"></a><span class="lineno"> 706</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (temp == -3) {</div>
|
|
<div class="line"><a id="l00707" name="l00707"></a><span class="lineno"> 707</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00708" name="l00708"></a><span class="lineno"> 708</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** The given template has not a valid run number! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00709" name="l00709"></a><span class="lineno"> 709</span> <span class="keywordflow">return</span> temp;</div>
|
|
<div class="line"><a id="l00710" name="l00710"></a><span class="lineno"> 710</span> }</div>
|
|
<div class="line"><a id="l00711" name="l00711"></a><span class="lineno"> 711</span> </div>
|
|
<div class="line"><a id="l00712" name="l00712"></a><span class="lineno"> 712</span> </div>
|
|
<div class="line"><a id="l00713" name="l00713"></a><span class="lineno"> 713</span> <span class="comment">// check if any options should be passed to musrfit</span></div>
|
|
<div class="line"><a id="l00714" name="l00714"></a><span class="lineno"> 714</span> <span class="keywordflow">if</span> (temp) {</div>
|
|
<div class="line"><a id="l00715" name="l00715"></a><span class="lineno"> 715</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"-k"</span>) || !<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"--keep-mn2-output"</span>))</div>
|
|
<div class="line"><a id="l00716" name="l00716"></a><span class="lineno"> 716</span> musrfitOptions.append(<span class="stringliteral">"-k "</span>);</div>
|
|
<div class="line"><a id="l00717" name="l00717"></a><span class="lineno"> 717</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"-t"</span>) || !<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"--title-from-data-file"</span>))</div>
|
|
<div class="line"><a id="l00718" name="l00718"></a><span class="lineno"> 718</span> musrfitOptions.append(<span class="stringliteral">"-t "</span>);</div>
|
|
<div class="line"><a id="l00719" name="l00719"></a><span class="lineno"> 719</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"-e"</span>) || !<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"--estimateN0"</span>))</div>
|
|
<div class="line"><a id="l00720" name="l00720"></a><span class="lineno"> 720</span> musrfitOptions.append(<span class="stringliteral">"-e "</span>);</div>
|
|
<div class="line"><a id="l00721" name="l00721"></a><span class="lineno"> 721</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"-y"</span>) || !<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"--yaml"</span>))</div>
|
|
<div class="line"><a id="l00722" name="l00722"></a><span class="lineno"> 722</span> musrfitOptions.append(<span class="stringliteral">"-y "</span>);</div>
|
|
<div class="line"><a id="l00723" name="l00723"></a><span class="lineno"> 723</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"-p"</span>) || !<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"--per-run-block-chisq"</span>))</div>
|
|
<div class="line"><a id="l00724" name="l00724"></a><span class="lineno"> 724</span> musrfitOptions.append(<span class="stringliteral">"-p "</span>);</div>
|
|
<div class="line"><a id="l00725" name="l00725"></a><span class="lineno"> 725</span> }</div>
|
|
<div class="line"><a id="l00726" name="l00726"></a><span class="lineno"> 726</span> </div>
|
|
<div class="line"><a id="l00727" name="l00727"></a><span class="lineno"> 727</span> <span class="comment">// if no fitting should be done, check if only the input files should be created</span></div>
|
|
<div class="line"><a id="l00728" name="l00728"></a><span class="lineno"> 728</span> <span class="keywordflow">if</span> (!temp) {</div>
|
|
<div class="line"><a id="l00729" name="l00729"></a><span class="lineno"> 729</span> temp = <a class="code hl_function" href="msr2data_8cpp.html#a10ce86209d8c52303e06fdda48f3b0d4">msr2data_doInputCreation</a>(arg, onlyInputCreation);</div>
|
|
<div class="line"><a id="l00730" name="l00730"></a><span class="lineno"> 730</span> <span class="keywordflow">if</span> (onlyInputCreation) {</div>
|
|
<div class="line"><a id="l00731" name="l00731"></a><span class="lineno"> 731</span> <span class="comment">// if only input files should be created, do not write data to an output file (no matter, what has been determined earlier)</span></div>
|
|
<div class="line"><a id="l00732" name="l00732"></a><span class="lineno"> 732</span> realOutput = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00733" name="l00733"></a><span class="lineno"> 733</span> outputFile = <span class="stringliteral">"none"</span>;</div>
|
|
<div class="line"><a id="l00734" name="l00734"></a><span class="lineno"> 734</span> }</div>
|
|
<div class="line"><a id="l00735" name="l00735"></a><span class="lineno"> 735</span> <span class="keywordflow">if</span> (temp == -3) {</div>
|
|
<div class="line"><a id="l00736" name="l00736"></a><span class="lineno"> 736</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00737" name="l00737"></a><span class="lineno"> 737</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** The given template has not a valid run number! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00738" name="l00738"></a><span class="lineno"> 738</span> <span class="keywordflow">return</span> temp;</div>
|
|
<div class="line"><a id="l00739" name="l00739"></a><span class="lineno"> 739</span> }</div>
|
|
<div class="line"><a id="l00740" name="l00740"></a><span class="lineno"> 740</span> }</div>
|
|
<div class="line"><a id="l00741" name="l00741"></a><span class="lineno"> 741</span> </div>
|
|
<div class="line"><a id="l00742" name="l00742"></a><span class="lineno"> 742</span> <span class="comment">// check if msr2data should work in the global fit regime</span></div>
|
|
<div class="line"><a id="l00743" name="l00743"></a><span class="lineno"> 743</span> <span class="keywordtype">bool</span> setNormalMode(<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"global"</span>));</div>
|
|
<div class="line"><a id="l00744" name="l00744"></a><span class="lineno"> 744</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> globalMode(0);</div>
|
|
<div class="line"><a id="l00745" name="l00745"></a><span class="lineno"> 745</span> </div>
|
|
<div class="line"><a id="l00746" name="l00746"></a><span class="lineno"> 746</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"global+!"</span>)) {</div>
|
|
<div class="line"><a id="l00747" name="l00747"></a><span class="lineno"> 747</span> setNormalMode = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00748" name="l00748"></a><span class="lineno"> 748</span> globalMode = 1;</div>
|
|
<div class="line"><a id="l00749" name="l00749"></a><span class="lineno"> 749</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"global+"</span>)) {</div>
|
|
<div class="line"><a id="l00750" name="l00750"></a><span class="lineno"> 750</span> setNormalMode = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00751" name="l00751"></a><span class="lineno"> 751</span> globalMode = 2;</div>
|
|
<div class="line"><a id="l00752" name="l00752"></a><span class="lineno"> 752</span> }</div>
|
|
<div class="line"><a id="l00753" name="l00753"></a><span class="lineno"> 753</span> </div>
|
|
<div class="line"><a id="l00754" name="l00754"></a><span class="lineno"> 754</span> <span class="comment">// At this point it should be clear if any template for input-file generation is given or not.</span></div>
|
|
<div class="line"><a id="l00755" name="l00755"></a><span class="lineno"> 755</span> <span class="comment">// Therefore, the number of digits in the run number format is determined only here.</span></div>
|
|
<div class="line"><a id="l00756" name="l00756"></a><span class="lineno"> 756</span> <span class="keywordflow">if</span> (temp > 0) {</div>
|
|
<div class="line"><a id="l00757" name="l00757"></a><span class="lineno"> 757</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->DetermineRunNumberDigits(temp, setNormalMode);</div>
|
|
<div class="line"><a id="l00758" name="l00758"></a><span class="lineno"> 758</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00759" name="l00759"></a><span class="lineno"> 759</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->DetermineRunNumberDigits(msr2dataHandler->GetPresentRun(), setNormalMode);</div>
|
|
<div class="line"><a id="l00760" name="l00760"></a><span class="lineno"> 760</span> }</div>
|
|
<div class="line"><a id="l00761" name="l00761"></a><span class="lineno"> 761</span> </div>
|
|
<div class="line"><a id="l00762" name="l00762"></a><span class="lineno"> 762</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>) {</div>
|
|
<div class="line"><a id="l00763" name="l00763"></a><span class="lineno"> 763</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00764" name="l00764"></a><span class="lineno"> 764</span> }</div>
|
|
<div class="line"><a id="l00765" name="l00765"></a><span class="lineno"> 765</span> </div>
|
|
<div class="line"><a id="l00766" name="l00766"></a><span class="lineno"> 766</span> <span class="comment">// Check if all given run numbers are covered by the formatting of the data file name</span></div>
|
|
<div class="line"><a id="l00767" name="l00767"></a><span class="lineno"> 767</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->CheckRunNumbersInRange();</div>
|
|
<div class="line"><a id="l00768" name="l00768"></a><span class="lineno"> 768</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>) {</div>
|
|
<div class="line"><a id="l00769" name="l00769"></a><span class="lineno"> 769</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00770" name="l00770"></a><span class="lineno"> 770</span> std::cerr << <span class="stringliteral">">> msr2data: **ERROR** At least one given run number is out of range! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00771" name="l00771"></a><span class="lineno"> 771</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00772" name="l00772"></a><span class="lineno"> 772</span> }</div>
|
|
<div class="line"><a id="l00773" name="l00773"></a><span class="lineno"> 773</span> </div>
|
|
<div class="line"><a id="l00774" name="l00774"></a><span class="lineno"> 774</span> <span class="keywordtype">bool</span> writeSummary(<span class="keyword">false</span>);</div>
|
|
<div class="line"><a id="l00775" name="l00775"></a><span class="lineno"> 775</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> writeHeader(2);</div>
|
|
<div class="line"><a id="l00776" name="l00776"></a><span class="lineno"> 776</span> <span class="comment">// writeHeader: 0 - no header</span></div>
|
|
<div class="line"><a id="l00777" name="l00777"></a><span class="lineno"> 777</span> <span class="comment">// 1 - write header explicitly (even if the file is present already)</span></div>
|
|
<div class="line"><a id="l00778" name="l00778"></a><span class="lineno"> 778</span> <span class="comment">// 2 - write header automatically if a new file is created and do not if the data is appended to an existing file</span></div>
|
|
<div class="line"><a id="l00779" name="l00779"></a><span class="lineno"> 779</span> </div>
|
|
<div class="line"><a id="l00780" name="l00780"></a><span class="lineno"> 780</span> std::unique_ptr<std::fstream> fileOutput;</div>
|
|
<div class="line"><a id="l00781" name="l00781"></a><span class="lineno"> 781</span> <span class="keywordflow">if</span> (realOutput) {</div>
|
|
<div class="line"><a id="l00782" name="l00782"></a><span class="lineno"> 782</span> <span class="comment">// check the arguments for the "header" and "noheader" options</span></div>
|
|
<div class="line"><a id="l00783" name="l00783"></a><span class="lineno"> 783</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"header"</span>)) {</div>
|
|
<div class="line"><a id="l00784" name="l00784"></a><span class="lineno"> 784</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"noheader"</span>)) {</div>
|
|
<div class="line"><a id="l00785" name="l00785"></a><span class="lineno"> 785</span> writeHeader = 2;</div>
|
|
<div class="line"><a id="l00786" name="l00786"></a><span class="lineno"> 786</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00787" name="l00787"></a><span class="lineno"> 787</span> writeHeader = 1;</div>
|
|
<div class="line"><a id="l00788" name="l00788"></a><span class="lineno"> 788</span> }</div>
|
|
<div class="line"><a id="l00789" name="l00789"></a><span class="lineno"> 789</span> } <span class="keywordflow">else</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"noheader"</span>)) {</div>
|
|
<div class="line"><a id="l00790" name="l00790"></a><span class="lineno"> 790</span> writeHeader = 0;</div>
|
|
<div class="line"><a id="l00791" name="l00791"></a><span class="lineno"> 791</span> }</div>
|
|
<div class="line"><a id="l00792" name="l00792"></a><span class="lineno"> 792</span> </div>
|
|
<div class="line"><a id="l00793" name="l00793"></a><span class="lineno"> 793</span> <span class="comment">// check the arguments for the "nosummary" option</span></div>
|
|
<div class="line"><a id="l00794" name="l00794"></a><span class="lineno"> 794</span> writeSummary = <a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"nosummary"</span>);</div>
|
|
<div class="line"><a id="l00795" name="l00795"></a><span class="lineno"> 795</span> </div>
|
|
<div class="line"><a id="l00796" name="l00796"></a><span class="lineno"> 796</span> <span class="comment">// delete old db/data file if the "new" option is given</span></div>
|
|
<div class="line"><a id="l00797" name="l00797"></a><span class="lineno"> 797</span> <span class="keywordflow">if</span> (!<a class="code hl_function" href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a>(arg, <span class="stringliteral">"new"</span>)) {</div>
|
|
<div class="line"><a id="l00798" name="l00798"></a><span class="lineno"> 798</span> fileOutput = std::make_unique<std::fstream>();</div>
|
|
<div class="line"><a id="l00799" name="l00799"></a><span class="lineno"> 799</span> fileOutput->open(outputFile.c_str(), std::ios::in);</div>
|
|
<div class="line"><a id="l00800" name="l00800"></a><span class="lineno"> 800</span> <span class="keywordflow">if</span> (fileOutput->is_open()) {</div>
|
|
<div class="line"><a id="l00801" name="l00801"></a><span class="lineno"> 801</span> std::cout << std::endl << <span class="stringliteral">">> msr2data: **INFO** Deleting output file "</span> << outputFile << std::endl;</div>
|
|
<div class="line"><a id="l00802" name="l00802"></a><span class="lineno"> 802</span> fileOutput->close();</div>
|
|
<div class="line"><a id="l00803" name="l00803"></a><span class="lineno"> 803</span> fileOutput->open(outputFile.c_str(), std::ios::out | std::ios::trunc);</div>
|
|
<div class="line"><a id="l00804" name="l00804"></a><span class="lineno"> 804</span> fileOutput->close();</div>
|
|
<div class="line"><a id="l00805" name="l00805"></a><span class="lineno"> 805</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00806" name="l00806"></a><span class="lineno"> 806</span> std::cout << std::endl << <span class="stringliteral">">> msr2data: **INFO** Ignoring the 'new' option since "</span> << outputFile << <span class="stringliteral">" does not exist yet."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00807" name="l00807"></a><span class="lineno"> 807</span> }</div>
|
|
<div class="line"><a id="l00808" name="l00808"></a><span class="lineno"> 808</span> <span class="keywordflow">if</span> (writeHeader == 2) {</div>
|
|
<div class="line"><a id="l00809" name="l00809"></a><span class="lineno"> 809</span> writeHeader = 1;</div>
|
|
<div class="line"><a id="l00810" name="l00810"></a><span class="lineno"> 810</span> }</div>
|
|
<div class="line"><a id="l00811" name="l00811"></a><span class="lineno"> 811</span> }</div>
|
|
<div class="line"><a id="l00812" name="l00812"></a><span class="lineno"> 812</span> }</div>
|
|
<div class="line"><a id="l00813" name="l00813"></a><span class="lineno"> 813</span> </div>
|
|
<div class="line"><a id="l00814" name="l00814"></a><span class="lineno"> 814</span> <span class="comment">// GLOBAL MODE</span></div>
|
|
<div class="line"><a id="l00815" name="l00815"></a><span class="lineno"> 815</span> <span class="keywordflow">if</span> (!setNormalMode) {</div>
|
|
<div class="line"><a id="l00816" name="l00816"></a><span class="lineno"> 816</span> std::ostringstream strInfile;</div>
|
|
<div class="line"><a id="l00817" name="l00817"></a><span class="lineno"> 817</span> strInfile << msr2dataHandler->GetPresentRun() << <span class="stringliteral">"+global"</span> << msrExtension << <span class="stringliteral">".msr"</span>;</div>
|
|
<div class="line"><a id="l00818" name="l00818"></a><span class="lineno"> 818</span> </div>
|
|
<div class="line"><a id="l00819" name="l00819"></a><span class="lineno"> 819</span> <span class="comment">// if fitting should be done, prepare a new input file</span></div>
|
|
<div class="line"><a id="l00820" name="l00820"></a><span class="lineno"> 820</span> <span class="keywordflow">if</span> (temp) {</div>
|
|
<div class="line"><a id="l00821" name="l00821"></a><span class="lineno"> 821</span> <span class="keywordflow">if</span> (temp > 0) { <span class="comment">// if it is smaller no input file should be generated</span></div>
|
|
<div class="line"><a id="l00822" name="l00822"></a><span class="lineno"> 822</span> <span class="keywordtype">bool</span> success(msr2dataHandler->PrepareGlobalInputFile(temp, strInfile.str(), globalMode));</div>
|
|
<div class="line"><a id="l00823" name="l00823"></a><span class="lineno"> 823</span> </div>
|
|
<div class="line"><a id="l00824" name="l00824"></a><span class="lineno"> 824</span> <span class="keywordflow">if</span> (!success) {</div>
|
|
<div class="line"><a id="l00825" name="l00825"></a><span class="lineno"> 825</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **ERROR** Input file generation has not been successful! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00826" name="l00826"></a><span class="lineno"> 826</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00827" name="l00827"></a><span class="lineno"> 827</span> }</div>
|
|
<div class="line"><a id="l00828" name="l00828"></a><span class="lineno"> 828</span> }</div>
|
|
<div class="line"><a id="l00829" name="l00829"></a><span class="lineno"> 829</span> </div>
|
|
<div class="line"><a id="l00830" name="l00830"></a><span class="lineno"> 830</span> <span class="comment">// and do the fitting</span></div>
|
|
<div class="line"><a id="l00831" name="l00831"></a><span class="lineno"> 831</span> <span class="keywordflow">if</span> (!onlyInputCreation) {</div>
|
|
<div class="line"><a id="l00832" name="l00832"></a><span class="lineno"> 832</span> <span class="comment">// check if MUSRFITPATH is set, if not issue a warning</span></div>
|
|
<div class="line"><a id="l00833" name="l00833"></a><span class="lineno"> 833</span> std::string path(<span class="stringliteral">""</span>);</div>
|
|
<div class="line"><a id="l00834" name="l00834"></a><span class="lineno"> 834</span> <span class="keywordtype">bool</span> pathSet(<span class="keyword">false</span>);</div>
|
|
<div class="line"><a id="l00835" name="l00835"></a><span class="lineno"> 835</span> <span class="keywordtype">char</span> *pathPtr(getenv(<span class="stringliteral">"MUSRFITPATH"</span>));</div>
|
|
<div class="line"><a id="l00836" name="l00836"></a><span class="lineno"> 836</span> <span class="keywordflow">if</span> (pathPtr) {</div>
|
|
<div class="line"><a id="l00837" name="l00837"></a><span class="lineno"> 837</span> path = boost::lexical_cast<std::string>(pathPtr);</div>
|
|
<div class="line"><a id="l00838" name="l00838"></a><span class="lineno"> 838</span> <span class="keywordflow">if</span> (!path.empty()) {</div>
|
|
<div class="line"><a id="l00839" name="l00839"></a><span class="lineno"> 839</span> pathSet = <span class="keyword">true</span>;</div>
|
|
<div class="line"><a id="l00840" name="l00840"></a><span class="lineno"> 840</span> path.append(<span class="stringliteral">"/"</span>);</div>
|
|
<div class="line"><a id="l00841" name="l00841"></a><span class="lineno"> 841</span> }</div>
|
|
<div class="line"><a id="l00842" name="l00842"></a><span class="lineno"> 842</span> }</div>
|
|
<div class="line"><a id="l00843" name="l00843"></a><span class="lineno"> 843</span> <span class="keywordflow">if</span> (!pathSet) {</div>
|
|
<div class="line"><a id="l00844" name="l00844"></a><span class="lineno"> 844</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **WARNING** The MUSRFITPATH environment variable is not set!"</span>;</div>
|
|
<div class="line"><a id="l00845" name="l00845"></a><span class="lineno"> 845</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **WARNING** Please set it or at least ensure that musrfit can be found on the PATH!"</span> << std::endl;</div>
|
|
<div class="line"><a id="l00846" name="l00846"></a><span class="lineno"> 846</span> }</div>
|
|
<div class="line"><a id="l00847" name="l00847"></a><span class="lineno"> 847</span> std::ostringstream oss;</div>
|
|
<div class="line"><a id="l00848" name="l00848"></a><span class="lineno"> 848</span> oss << path << <span class="stringliteral">"musrfit"</span> << <span class="stringliteral">" "</span> << strInfile.str() << <span class="stringliteral">" "</span> << musrfitOptions;</div>
|
|
<div class="line"><a id="l00849" name="l00849"></a><span class="lineno"> 849</span> std::cout << std::endl << <span class="stringliteral">">> msr2data: **INFO** Calling "</span> << oss.str() << std::endl;</div>
|
|
<div class="line"><a id="l00850" name="l00850"></a><span class="lineno"> 850</span> <span class="keywordflow">if</span> (system(oss.str().c_str()) == -1) {</div>
|
|
<div class="line"><a id="l00851" name="l00851"></a><span class="lineno"> 851</span> std::cerr << <span class="stringliteral">"**ERROR** cmd: "</span> << oss.str().c_str() << <span class="stringliteral">" failed."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00852" name="l00852"></a><span class="lineno"> 852</span> }</div>
|
|
<div class="line"><a id="l00853" name="l00853"></a><span class="lineno"> 853</span> }</div>
|
|
<div class="line"><a id="l00854" name="l00854"></a><span class="lineno"> 854</span> }</div>
|
|
<div class="line"><a id="l00855" name="l00855"></a><span class="lineno"> 855</span> </div>
|
|
<div class="line"><a id="l00856" name="l00856"></a><span class="lineno"> 856</span> <span class="keywordflow">if</span> (realOutput) {</div>
|
|
<div class="line"><a id="l00857" name="l00857"></a><span class="lineno"> 857</span> <span class="comment">// read musrfit startup file</span></div>
|
|
<div class="line"><a id="l00858" name="l00858"></a><span class="lineno"> 858</span> <span class="keywordflow">if</span> (writeSummary) {</div>
|
|
<div class="line"><a id="l00859" name="l00859"></a><span class="lineno"> 859</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->ParseXmlStartupFile();</div>
|
|
<div class="line"><a id="l00860" name="l00860"></a><span class="lineno"> 860</span> }</div>
|
|
<div class="line"><a id="l00861" name="l00861"></a><span class="lineno"> 861</span> </div>
|
|
<div class="line"><a id="l00862" name="l00862"></a><span class="lineno"> 862</span> <span class="comment">// Read msr file</span></div>
|
|
<div class="line"><a id="l00863" name="l00863"></a><span class="lineno"> 863</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->ReadMsrFile(strInfile.str());</div>
|
|
<div class="line"><a id="l00864" name="l00864"></a><span class="lineno"> 864</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> != <a class="code hl_define" href="PMusr_8h.html#a3d787679eab8ebdac43868869b059d02">PMUSR_SUCCESS</a>) {</div>
|
|
<div class="line"><a id="l00865" name="l00865"></a><span class="lineno"> 865</span> arg.clear();</div>
|
|
<div class="line"><a id="l00866" name="l00866"></a><span class="lineno"> 866</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00867" name="l00867"></a><span class="lineno"> 867</span> }</div>
|
|
<div class="line"><a id="l00868" name="l00868"></a><span class="lineno"> 868</span> </div>
|
|
<div class="line"><a id="l00869" name="l00869"></a><span class="lineno"> 869</span> <span class="comment">// read data files</span></div>
|
|
<div class="line"><a id="l00870" name="l00870"></a><span class="lineno"> 870</span> <span class="keywordflow">if</span> (writeSummary)</div>
|
|
<div class="line"><a id="l00871" name="l00871"></a><span class="lineno"> 871</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->ReadRunDataFile();</div>
|
|
<div class="line"><a id="l00872" name="l00872"></a><span class="lineno"> 872</span> </div>
|
|
<div class="line"><a id="l00873" name="l00873"></a><span class="lineno"> 873</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> counter(0);</div>
|
|
<div class="line"><a id="l00874" name="l00874"></a><span class="lineno"> 874</span> </div>
|
|
<div class="line"><a id="l00875" name="l00875"></a><span class="lineno"> 875</span> <span class="keywordflow">while</span> (msr2dataHandler->GetPresentRun()) {</div>
|
|
<div class="line"><a id="l00876" name="l00876"></a><span class="lineno"> 876</span> <span class="comment">// write DB or dat file</span></div>
|
|
<div class="line"><a id="l00877" name="l00877"></a><span class="lineno"> 877</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->WriteOutput(outputFile, param_vec, db, writeHeader, !setNormalMode, counter);</div>
|
|
<div class="line"><a id="l00878" name="l00878"></a><span class="lineno"> 878</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> == -1) {</div>
|
|
<div class="line"><a id="l00879" name="l00879"></a><span class="lineno"> 879</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00880" name="l00880"></a><span class="lineno"> 880</span> }</div>
|
|
<div class="line"><a id="l00881" name="l00881"></a><span class="lineno"> 881</span> ++counter;</div>
|
|
<div class="line"><a id="l00882" name="l00882"></a><span class="lineno"> 882</span> }</div>
|
|
<div class="line"><a id="l00883" name="l00883"></a><span class="lineno"> 883</span> }</div>
|
|
<div class="line"><a id="l00884" name="l00884"></a><span class="lineno"> 884</span> } <span class="keywordflow">else</span> { <span class="comment">// NORMAL MODE - one msr-file for each run</span></div>
|
|
<div class="line"><a id="l00885" name="l00885"></a><span class="lineno"> 885</span> </div>
|
|
<div class="line"><a id="l00886" name="l00886"></a><span class="lineno"> 886</span> <span class="comment">// read musrfit startup file</span></div>
|
|
<div class="line"><a id="l00887" name="l00887"></a><span class="lineno"> 887</span> <span class="keywordflow">if</span> (writeSummary) {</div>
|
|
<div class="line"><a id="l00888" name="l00888"></a><span class="lineno"> 888</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->ParseXmlStartupFile();</div>
|
|
<div class="line"><a id="l00889" name="l00889"></a><span class="lineno"> 889</span> }</div>
|
|
<div class="line"><a id="l00890" name="l00890"></a><span class="lineno"> 890</span> </div>
|
|
<div class="line"><a id="l00891" name="l00891"></a><span class="lineno"> 891</span> <span class="comment">// Processing the run list, do the fitting and write the data to the DB or data output file</span></div>
|
|
<div class="line"><a id="l00892" name="l00892"></a><span class="lineno"> 892</span> <span class="keywordtype">bool</span> firstrun(<span class="keyword">true</span>);</div>
|
|
<div class="line"><a id="l00893" name="l00893"></a><span class="lineno"> 893</span> <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> oldtemp(0); <span class="comment">// should be accessed only when updated before...</span></div>
|
|
<div class="line"><a id="l00894" name="l00894"></a><span class="lineno"> 894</span> std::ostringstream strInfile;</div>
|
|
<div class="line"><a id="l00895" name="l00895"></a><span class="lineno"> 895</span> </div>
|
|
<div class="line"><a id="l00896" name="l00896"></a><span class="lineno"> 896</span> <span class="keywordflow">while</span> (msr2dataHandler->GetPresentRun()) {</div>
|
|
<div class="line"><a id="l00897" name="l00897"></a><span class="lineno"> 897</span> strInfile.clear();</div>
|
|
<div class="line"><a id="l00898" name="l00898"></a><span class="lineno"> 898</span> strInfile.str(<span class="stringliteral">""</span>);</div>
|
|
<div class="line"><a id="l00899" name="l00899"></a><span class="lineno"> 899</span> strInfile << msr2dataHandler->GetPresentRun() << msrExtension << <span class="stringliteral">".msr"</span>;</div>
|
|
<div class="line"><a id="l00900" name="l00900"></a><span class="lineno"> 900</span> </div>
|
|
<div class="line"><a id="l00901" name="l00901"></a><span class="lineno"> 901</span> <span class="comment">// if fitting should be done, prepare a new input file</span></div>
|
|
<div class="line"><a id="l00902" name="l00902"></a><span class="lineno"> 902</span> <span class="keywordflow">if</span> (temp) {</div>
|
|
<div class="line"><a id="l00903" name="l00903"></a><span class="lineno"> 903</span> <span class="keywordflow">if</span> (temp > 0) {</div>
|
|
<div class="line"><a id="l00904" name="l00904"></a><span class="lineno"> 904</span> <span class="keywordtype">bool</span> success(<span class="keyword">true</span>);</div>
|
|
<div class="line"><a id="l00905" name="l00905"></a><span class="lineno"> 905</span> <span class="keywordflow">if</span> (firstrun || !chainfit)</div>
|
|
<div class="line"><a id="l00906" name="l00906"></a><span class="lineno"> 906</span> success = msr2dataHandler->PrepareNewInputFile(temp, <span class="keyword">false</span>);</div>
|
|
<div class="line"><a id="l00907" name="l00907"></a><span class="lineno"> 907</span> <span class="keywordflow">else</span></div>
|
|
<div class="line"><a id="l00908" name="l00908"></a><span class="lineno"> 908</span> success = msr2dataHandler->PrepareNewInputFile(oldtemp, <span class="keyword">false</span>);</div>
|
|
<div class="line"><a id="l00909" name="l00909"></a><span class="lineno"> 909</span> <span class="keywordflow">if</span> (firstrun)</div>
|
|
<div class="line"><a id="l00910" name="l00910"></a><span class="lineno"> 910</span> firstrun = <span class="keyword">false</span>;</div>
|
|
<div class="line"><a id="l00911" name="l00911"></a><span class="lineno"> 911</span> oldtemp = msr2dataHandler->GetPresentRun();</div>
|
|
<div class="line"><a id="l00912" name="l00912"></a><span class="lineno"> 912</span> </div>
|
|
<div class="line"><a id="l00913" name="l00913"></a><span class="lineno"> 913</span> <span class="keywordflow">if</span> (!success) {</div>
|
|
<div class="line"><a id="l00914" name="l00914"></a><span class="lineno"> 914</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **ERROR** Input file generation has not been successful! Quitting..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00915" name="l00915"></a><span class="lineno"> 915</span> <span class="keywordflow">return</span> -1;</div>
|
|
<div class="line"><a id="l00916" name="l00916"></a><span class="lineno"> 916</span> }</div>
|
|
<div class="line"><a id="l00917" name="l00917"></a><span class="lineno"> 917</span> }</div>
|
|
<div class="line"><a id="l00918" name="l00918"></a><span class="lineno"> 918</span> </div>
|
|
<div class="line"><a id="l00919" name="l00919"></a><span class="lineno"> 919</span> <span class="comment">// and do the fitting</span></div>
|
|
<div class="line"><a id="l00920" name="l00920"></a><span class="lineno"> 920</span> <span class="keywordflow">if</span> (!onlyInputCreation) {</div>
|
|
<div class="line"><a id="l00921" name="l00921"></a><span class="lineno"> 921</span> <span class="comment">// check if MUSRFITPATH is set, if not issue a warning</span></div>
|
|
<div class="line"><a id="l00922" name="l00922"></a><span class="lineno"> 922</span> std::string path(<span class="stringliteral">""</span>);</div>
|
|
<div class="line"><a id="l00923" name="l00923"></a><span class="lineno"> 923</span> <span class="keywordtype">bool</span> pathSet(<span class="keyword">false</span>);</div>
|
|
<div class="line"><a id="l00924" name="l00924"></a><span class="lineno"> 924</span> <span class="keywordtype">char</span> *pathPtr(getenv(<span class="stringliteral">"MUSRFITPATH"</span>));</div>
|
|
<div class="line"><a id="l00925" name="l00925"></a><span class="lineno"> 925</span> <span class="keywordflow">if</span> (pathPtr) {</div>
|
|
<div class="line"><a id="l00926" name="l00926"></a><span class="lineno"> 926</span> path = boost::lexical_cast<std::string>(pathPtr);</div>
|
|
<div class="line"><a id="l00927" name="l00927"></a><span class="lineno"> 927</span> <span class="keywordflow">if</span> (!path.empty()) {</div>
|
|
<div class="line"><a id="l00928" name="l00928"></a><span class="lineno"> 928</span> pathSet = <span class="keyword">true</span>;</div>
|
|
<div class="line"><a id="l00929" name="l00929"></a><span class="lineno"> 929</span> path.append(<span class="stringliteral">"/"</span>);</div>
|
|
<div class="line"><a id="l00930" name="l00930"></a><span class="lineno"> 930</span> }</div>
|
|
<div class="line"><a id="l00931" name="l00931"></a><span class="lineno"> 931</span> }</div>
|
|
<div class="line"><a id="l00932" name="l00932"></a><span class="lineno"> 932</span> <span class="keywordflow">if</span> (!pathSet) {</div>
|
|
<div class="line"><a id="l00933" name="l00933"></a><span class="lineno"> 933</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **WARNING** The MUSRFITPATH environment variable is not set!"</span>;</div>
|
|
<div class="line"><a id="l00934" name="l00934"></a><span class="lineno"> 934</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **WARNING** Please set it or at least ensure that musrfit can be found on the PATH!"</span> << std::endl;</div>
|
|
<div class="line"><a id="l00935" name="l00935"></a><span class="lineno"> 935</span> }</div>
|
|
<div class="line"><a id="l00936" name="l00936"></a><span class="lineno"> 936</span> std::ostringstream oss;</div>
|
|
<div class="line"><a id="l00937" name="l00937"></a><span class="lineno"> 937</span> oss << path << <span class="stringliteral">"musrfit"</span> << <span class="stringliteral">" "</span> << strInfile.str() << <span class="stringliteral">" "</span> << musrfitOptions;</div>
|
|
<div class="line"><a id="l00938" name="l00938"></a><span class="lineno"> 938</span> std::cout << std::endl << <span class="stringliteral">">> msr2data: **INFO** Calling "</span> << oss.str() << std::endl;</div>
|
|
<div class="line"><a id="l00939" name="l00939"></a><span class="lineno"> 939</span> <span class="keywordflow">if</span> (system(oss.str().c_str()) == -1) {</div>
|
|
<div class="line"><a id="l00940" name="l00940"></a><span class="lineno"> 940</span> std::cerr << <span class="stringliteral">"**ERROR** cmd: "</span> << oss.str().c_str() << <span class="stringliteral">" failed."</span> << std::endl;</div>
|
|
<div class="line"><a id="l00941" name="l00941"></a><span class="lineno"> 941</span> }</div>
|
|
<div class="line"><a id="l00942" name="l00942"></a><span class="lineno"> 942</span> }</div>
|
|
<div class="line"><a id="l00943" name="l00943"></a><span class="lineno"> 943</span> }</div>
|
|
<div class="line"><a id="l00944" name="l00944"></a><span class="lineno"> 944</span> </div>
|
|
<div class="line"><a id="l00945" name="l00945"></a><span class="lineno"> 945</span> <span class="comment">// read msr-file</span></div>
|
|
<div class="line"><a id="l00946" name="l00946"></a><span class="lineno"> 946</span> <span class="keywordflow">if</span> (realOutput) {</div>
|
|
<div class="line"><a id="l00947" name="l00947"></a><span class="lineno"> 947</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->ReadMsrFile(strInfile.str());</div>
|
|
<div class="line"><a id="l00948" name="l00948"></a><span class="lineno"> 948</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> != <a class="code hl_define" href="PMusr_8h.html#a3d787679eab8ebdac43868869b059d02">PMUSR_SUCCESS</a>) {</div>
|
|
<div class="line"><a id="l00949" name="l00949"></a><span class="lineno"> 949</span> <span class="comment">// if the msr-file cannot be read, write no output but proceed to the next run</span></div>
|
|
<div class="line"><a id="l00950" name="l00950"></a><span class="lineno"> 950</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->WriteOutput(<span class="stringliteral">"none"</span>, param_vec, db, writeHeader);</div>
|
|
<div class="line"><a id="l00951" name="l00951"></a><span class="lineno"> 951</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> == -1) {</div>
|
|
<div class="line"><a id="l00952" name="l00952"></a><span class="lineno"> 952</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00953" name="l00953"></a><span class="lineno"> 953</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00954" name="l00954"></a><span class="lineno"> 954</span> <span class="keywordflow">continue</span>;</div>
|
|
<div class="line"><a id="l00955" name="l00955"></a><span class="lineno"> 955</span> }</div>
|
|
<div class="line"><a id="l00956" name="l00956"></a><span class="lineno"> 956</span> }</div>
|
|
<div class="line"><a id="l00957" name="l00957"></a><span class="lineno"> 957</span> }</div>
|
|
<div class="line"><a id="l00958" name="l00958"></a><span class="lineno"> 958</span> </div>
|
|
<div class="line"><a id="l00959" name="l00959"></a><span class="lineno"> 959</span> <span class="comment">// read data files</span></div>
|
|
<div class="line"><a id="l00960" name="l00960"></a><span class="lineno"> 960</span> <span class="keywordflow">if</span> (writeSummary)</div>
|
|
<div class="line"><a id="l00961" name="l00961"></a><span class="lineno"> 961</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->ReadRunDataFile();</div>
|
|
<div class="line"><a id="l00962" name="l00962"></a><span class="lineno"> 962</span> </div>
|
|
<div class="line"><a id="l00963" name="l00963"></a><span class="lineno"> 963</span> <span class="comment">// write DB or dat file</span></div>
|
|
<div class="line"><a id="l00964" name="l00964"></a><span class="lineno"> 964</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> = msr2dataHandler->WriteOutput(outputFile, param_vec, db, writeHeader);</div>
|
|
<div class="line"><a id="l00965" name="l00965"></a><span class="lineno"> 965</span> <span class="keywordflow">if</span> (<a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a> == -1) {</div>
|
|
<div class="line"><a id="l00966" name="l00966"></a><span class="lineno"> 966</span> <span class="keywordflow">return</span> <a class="code hl_variable" href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a>;</div>
|
|
<div class="line"><a id="l00967" name="l00967"></a><span class="lineno"> 967</span> }</div>
|
|
<div class="line"><a id="l00968" name="l00968"></a><span class="lineno"> 968</span> }</div>
|
|
<div class="line"><a id="l00969" name="l00969"></a><span class="lineno"> 969</span> }</div>
|
|
<div class="line"><a id="l00970" name="l00970"></a><span class="lineno"> 970</span> </div>
|
|
<div class="line"><a id="l00971" name="l00971"></a><span class="lineno"> 971</span> <span class="comment">// Make sure that the empty line at the end of the output file gets written</span></div>
|
|
<div class="line"><a id="l00972" name="l00972"></a><span class="lineno"> 972</span> <span class="comment">// This is needed to create a "valid db-file", however, we do it for all output files</span></div>
|
|
<div class="line"><a id="l00973" name="l00973"></a><span class="lineno"> 973</span> <span class="comment">// Unfortunately, this can be done in a coherent way only on that level</span></div>
|
|
<div class="line"><a id="l00974" name="l00974"></a><span class="lineno"> 974</span> <span class="comment">// Unfortunately, there are also problems with boost::filesystem::exists(outputFile)</span></div>
|
|
<div class="line"><a id="l00975" name="l00975"></a><span class="lineno"> 975</span> <span class="comment">// Therefore, first try to open the file for reading and if this works, write to it - not clean but it works</span></div>
|
|
<div class="line"><a id="l00976" name="l00976"></a><span class="lineno"> 976</span> <span class="keywordflow">if</span> (realOutput) {</div>
|
|
<div class="line"><a id="l00977" name="l00977"></a><span class="lineno"> 977</span> fileOutput = std::make_unique<std::fstream>();</div>
|
|
<div class="line"><a id="l00978" name="l00978"></a><span class="lineno"> 978</span> fileOutput->open(outputFile.c_str(), std::ios::in);</div>
|
|
<div class="line"><a id="l00979" name="l00979"></a><span class="lineno"> 979</span> <span class="keywordflow">if</span> (fileOutput->is_open()) {</div>
|
|
<div class="line"><a id="l00980" name="l00980"></a><span class="lineno"> 980</span> fileOutput->close();</div>
|
|
<div class="line"><a id="l00981" name="l00981"></a><span class="lineno"> 981</span> fileOutput->open(outputFile.c_str(), std::ios::out | std::ios::app);</div>
|
|
<div class="line"><a id="l00982" name="l00982"></a><span class="lineno"> 982</span> <span class="keywordflow">if</span> (fileOutput->is_open()) {</div>
|
|
<div class="line"><a id="l00983" name="l00983"></a><span class="lineno"> 983</span> *fileOutput << std::endl << std::endl;</div>
|
|
<div class="line"><a id="l00984" name="l00984"></a><span class="lineno"> 984</span> fileOutput->close();</div>
|
|
<div class="line"><a id="l00985" name="l00985"></a><span class="lineno"> 985</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00986" name="l00986"></a><span class="lineno"> 986</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **ERROR** The output file "</span> << outputFile << <span class="stringliteral">" cannot be opened! Please check!"</span>;</div>
|
|
<div class="line"><a id="l00987" name="l00987"></a><span class="lineno"> 987</span> std::cerr << std::endl;</div>
|
|
<div class="line"><a id="l00988" name="l00988"></a><span class="lineno"> 988</span> }</div>
|
|
<div class="line"><a id="l00989" name="l00989"></a><span class="lineno"> 989</span> } <span class="keywordflow">else</span> {</div>
|
|
<div class="line"><a id="l00990" name="l00990"></a><span class="lineno"> 990</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **WARNING** No output has been written to the file "</span> << outputFile << <span class="stringliteral">"!"</span>;</div>
|
|
<div class="line"><a id="l00991" name="l00991"></a><span class="lineno"> 991</span> std::cerr << std::endl << <span class="stringliteral">">> msr2data: **WARNING** Please check the range of runs and the specified options!"</span> << std::endl;</div>
|
|
<div class="line"><a id="l00992" name="l00992"></a><span class="lineno"> 992</span> }</div>
|
|
<div class="line"><a id="l00993" name="l00993"></a><span class="lineno"> 993</span> }</div>
|
|
<div class="line"><a id="l00994" name="l00994"></a><span class="lineno"> 994</span> </div>
|
|
<div class="line"><a id="l00995" name="l00995"></a><span class="lineno"> 995</span> <span class="keywordflow">if</span> (!arg.empty()) {</div>
|
|
<div class="line"><a id="l00996" name="l00996"></a><span class="lineno"> 996</span> std::cout << std::endl << <span class="stringliteral">">> msr2data: **INFO** The following command line arguments have been specified but not been used: "</span> << std::endl;</div>
|
|
<div class="line"><a id="l00997" name="l00997"></a><span class="lineno"> 997</span> std::cout << <span class="stringliteral">">> msr2data: **INFO**"</span>;</div>
|
|
<div class="line"><a id="l00998" name="l00998"></a><span class="lineno"> 998</span> <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i(0); i<arg.size(); ++i)</div>
|
|
<div class="line"><a id="l00999" name="l00999"></a><span class="lineno"> 999</span> std::cout << <span class="stringliteral">" "</span> << arg[i];</div>
|
|
<div class="line"><a id="l01000" name="l01000"></a><span class="lineno"> 1000</span> std::cout << std::endl;</div>
|
|
<div class="line"><a id="l01001" name="l01001"></a><span class="lineno"> 1001</span> }</div>
|
|
<div class="line"><a id="l01002" name="l01002"></a><span class="lineno"> 1002</span> </div>
|
|
<div class="line"><a id="l01003" name="l01003"></a><span class="lineno"> 1003</span> std::cout << std::endl << <span class="stringliteral">">> msr2data: done ..."</span> << std::endl;</div>
|
|
<div class="line"><a id="l01004" name="l01004"></a><span class="lineno"> 1004</span> </div>
|
|
<div class="line"><a id="l01005" name="l01005"></a><span class="lineno"> 1005</span> <span class="keywordflow">return</span> 1;</div>
|
|
<div class="line"><a id="l01006" name="l01006"></a><span class="lineno"> 1006</span>}</div>
|
|
<div class="ttc" id="aPMsr2Data_8h_html"><div class="ttname"><a href="PMsr2Data_8h.html">PMsr2Data.h</a></div></div>
|
|
<div class="ttc" id="aPMusr_8h_html"><div class="ttname"><a href="PMusr_8h.html">PMusr.h</a></div></div>
|
|
<div class="ttc" id="aPMusr_8h_html_a3d787679eab8ebdac43868869b059d02"><div class="ttname"><a href="PMusr_8h.html#a3d787679eab8ebdac43868869b059d02">PMUSR_SUCCESS</a></div><div class="ttdeci">#define PMUSR_SUCCESS</div><div class="ttdoc">Successful operation completion.</div><div class="ttdef"><b>Definition</b> <a href="PMusr_8h_source.html#l00053">PMusr.h:53</a></div></div>
|
|
<div class="ttc" id="aPStartupHandler_8cpp_html_a9611b3a00430a86619b5923de30f9fdb"><div class="ttname"><a href="PStartupHandler_8cpp.html#a9611b3a00430a86619b5923de30f9fdb">status</a></div><div class="ttdeci">return status</div><div class="ttdef"><b>Definition</b> <a href="PStartupHandler_8cpp_source.html#l00106">PStartupHandler.cpp:106</a></div></div>
|
|
<div class="ttc" id="aaddRun_8cpp_html_a0ddf1224851353fc92bfbff6f499fa97"><div class="ttname"><a href="addRun_8cpp.html#a0ddf1224851353fc92bfbff6f499fa97">main</a></div><div class="ttdeci">int main(int argc, char *argv[])</div><div class="ttdef"><b>Definition</b> <a href="addRun_8cpp_source.html#l00364">addRun.cpp:364</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_a10ce86209d8c52303e06fdda48f3b0d4"><div class="ttname"><a href="msr2data_8cpp.html#a10ce86209d8c52303e06fdda48f3b0d4">msr2data_doInputCreation</a></div><div class="ttdeci">int msr2data_doInputCreation(std::vector< std::string > &arg, bool &inputOnly)</div><div class="ttdef"><b>Definition</b> <a href="#l00358">msr2data.cpp:358</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_a1c4ef503dae929ef9e1673e28bc59a0c"><div class="ttname"><a href="msr2data_8cpp.html#a1c4ef503dae929ef9e1673e28bc59a0c">msr2data_syntax</a></div><div class="ttdeci">void msr2data_syntax()</div><div class="ttdef"><b>Definition</b> <a href="#l00086">msr2data.cpp:86</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_a4ad3c3f39fa1eba58e821e784cc72e5e"><div class="ttname"><a href="msr2data_8cpp.html#a4ad3c3f39fa1eba58e821e784cc72e5e">msr2data_outputfile</a></div><div class="ttdeci">std::string msr2data_outputfile(std::vector< std::string > &arg, bool db=true)</div><div class="ttdef"><b>Definition</b> <a href="#l00226">msr2data.cpp:226</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_a7d3987fc1f326133c36ffd551acbc716"><div class="ttname"><a href="msr2data_8cpp.html#a7d3987fc1f326133c36ffd551acbc716">msr2data_validArguments</a></div><div class="ttdeci">std::string msr2data_validArguments(const std::vector< std::string > &arg)</div><div class="ttdef"><b>Definition</b> <a href="#l00182">msr2data.cpp:182</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_a8e4707d1c7ef83a180023a19e83a1965"><div class="ttname"><a href="msr2data_8cpp.html#a8e4707d1c7ef83a180023a19e83a1965">msr2data_doFitting</a></div><div class="ttdeci">int msr2data_doFitting(std::vector< std::string > &arg, bool &chainfit)</div><div class="ttdef"><b>Definition</b> <a href="#l00305">msr2data.cpp:305</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_aaa3b01d6b7b6b5bf4b868b37fcf3ac6f"><div class="ttname"><a href="msr2data_8cpp.html#aaa3b01d6b7b6b5bf4b868b37fcf3ac6f">isNumber</a></div><div class="ttdeci">bool isNumber(const std::string &s)</div><div class="ttdef"><b>Definition</b> <a href="#l00070">msr2data.cpp:70</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_ac4d1b424cbb6759ca7fab203369c7a97"><div class="ttname"><a href="msr2data_8cpp.html#ac4d1b424cbb6759ca7fab203369c7a97">msr2data_useOption</a></div><div class="ttdeci">bool msr2data_useOption(std::vector< std::string > &arg, const std::string &s)</div><div class="ttdef"><b>Definition</b> <a href="#l00276">msr2data.cpp:276</a></div></div>
|
|
<div class="ttc" id="amsr2data_8cpp_html_ae3282f0a3e81896ed307eddba3b1245a"><div class="ttname"><a href="msr2data_8cpp.html#ae3282f0a3e81896ed307eddba3b1245a">msr2data_paramList</a></div><div class="ttdeci">int msr2data_paramList(std::vector< std::string > &arg, std::vector< unsigned int > &paramList)</div><div class="ttdef"><b>Definition</b> <a href="#l00386">msr2data.cpp:386</a></div></div>
|
|
</div><!-- fragment --></div><!-- contents -->
|
|
</div><!-- doc-content -->
|
|
<!-- start footer part -->
|
|
<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
|
|
<ul>
|
|
<li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="msr2data_8cpp.html">msr2data.cpp</a></li>
|
|
<li class="footer">Generated by <a href="https://www.doxygen.org/index.html"><img class="footer" src="doxygen.svg" width="104" height="31" alt="doxygen"/></a> 1.13.2 </li>
|
|
</ul>
|
|
</div>
|
|
</body>
|
|
</html>
|