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<div class="textblock"><code>#include &lt;iostream&gt;</code><br />
<code>#include &lt;fstream&gt;</code><br />
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<p><a href="msr2msr_8cpp_source.html">Go to the source code of this file.</a></p>
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Macros</h2></td></tr>
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<h2 class="groupheader">Macro Definition Documentation</h2>
<a id="a4ebe47f4b88e7a5328580e4cf115ae32" name="a4ebe47f4b88e7a5328580e4cf115ae32"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a4ebe47f4b88e7a5328580e4cf115ae32">&#9670;&#160;</a></span>MSR_TAG_COMMANDS</h2>
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<td class="memname">#define MSR_TAG_COMMANDS&#160;&#160;&#160;5</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00048">48</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<a id="ab09701d87c07947710a9897d4cab6498" name="ab09701d87c07947710a9897d4cab6498"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ab09701d87c07947710a9897d4cab6498">&#9670;&#160;</a></span>MSR_TAG_FITPARAMETER</h2>
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<td class="memname">#define MSR_TAG_FITPARAMETER&#160;&#160;&#160;1</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00044">44</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<a id="a0be96720898c003acea3f3f24bbd209f" name="a0be96720898c003acea3f3f24bbd209f"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a0be96720898c003acea3f3f24bbd209f">&#9670;&#160;</a></span>MSR_TAG_FUNCTIONS</h2>
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<td class="memname">#define MSR_TAG_FUNCTIONS&#160;&#160;&#160;3</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00046">46</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a28a07f179b0df13ae83b0a317800ecce">&#9670;&#160;</a></span>MSR_TAG_NO_BLOCK</h2>
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<td class="memname">#define MSR_TAG_NO_BLOCK&#160;&#160;&#160;8</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00051">51</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<a id="a9ef18fa393d89ca0ab17cc852a09722c" name="a9ef18fa393d89ca0ab17cc852a09722c"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a9ef18fa393d89ca0ab17cc852a09722c">&#9670;&#160;</a></span>MSR_TAG_PLOT</h2>
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<td class="memname">#define MSR_TAG_PLOT&#160;&#160;&#160;6</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00049">49</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<a id="a019d398db1e0449dbebb7030ea7033dd" name="a019d398db1e0449dbebb7030ea7033dd"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a019d398db1e0449dbebb7030ea7033dd">&#9670;&#160;</a></span>MSR_TAG_RUN</h2>
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<td class="memname">#define MSR_TAG_RUN&#160;&#160;&#160;4</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00047">47</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<a id="ac20fd43275726784bbb53d2c61e680ed" name="ac20fd43275726784bbb53d2c61e680ed"></a>
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<td class="memname">#define MSR_TAG_STATISTIC&#160;&#160;&#160;7</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00050">50</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a5d895b16abcd2560c51dd2309525d01a">&#9670;&#160;</a></span>MSR_TAG_THEORY</h2>
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<td class="memname">#define MSR_TAG_THEORY&#160;&#160;&#160;2</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00045">45</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a00728afcd3500d78375b815a004941d1">&#9670;&#160;</a></span>MSR_TAG_TITLE</h2>
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<td class="memname">#define MSR_TAG_TITLE&#160;&#160;&#160;0</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00043">43</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a8506283d2a66e4c5b6fa23349bea0d9a">&#9670;&#160;</a></span>MSR_THEORY_INTERN_BESSEL</h2>
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<td class="memname">#define MSR_THEORY_INTERN_BESSEL&#160;&#160;&#160;1</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00056">56</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00511">msr2msr_finalize_theory()</a>, and <a class="el" href="msr2msr_8cpp_source.html#l00273">msr2msr_theory()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a6af352af4023cc26e07e18bcec2bb77a">&#9670;&#160;</a></span>MSR_THEORY_INTERN_FLD</h2>
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<td class="memname">#define MSR_THEORY_INTERN_FLD&#160;&#160;&#160;0</td>
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<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00055">55</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00511">msr2msr_finalize_theory()</a>, and <a class="el" href="msr2msr_8cpp_source.html#l00273">msr2msr_theory()</a>.</p>
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<h2 class="groupheader">Function Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a0ddf1224851353fc92bfbff6f499fa97">&#9670;&#160;</a></span>main()</h2>
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<td class="memname">int main </td>
<td>(</td>
<td class="paramtype">int</td> <td class="paramname"><span class="paramname"><em>argc</em></span>, </td>
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<td class="paramkey"></td>
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<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>argv</em></span>[]&#160;)</td>
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<p>msr2msr is needed to convert old WKM msr-files to musrfit msr-files. Eventhough the syntax is <b>very</b> close, there are some shortcomings in the WKM msr-files, which forced me to slightly change the file format.</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">argc</td><td>number of arguments </td></tr>
<tr><td class="paramname">argv</td><td>list of arguments </td></tr>
</table>
</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00641">641</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">References <a class="el" href="msr2msr_8cpp_source.html#l00511">msr2msr_finalize_theory()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00158">msr2msr_param()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00083">msr2msr_run()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00604">msr2msr_statistic()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00062">msr2msr_syntax()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00273">msr2msr_theory()</a>, <a class="el" href="PMusr_8h_source.html#l00185">MSR_TAG_FITPARAMETER</a>, <a class="el" href="PMusr_8h_source.html#l00193">MSR_TAG_RUN</a>, <a class="el" href="PMusr_8h_source.html#l00201">MSR_TAG_STATISTIC</a>, and <a class="el" href="PMusr_8h_source.html#l00187">MSR_TAG_THEORY</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aebfe12fe8bb0e1ac33922f3e2f5ef514">&#9670;&#160;</a></span>msr2msr_finalize_theory()</h2>
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<td class="memname">bool msr2msr_finalize_theory </td>
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<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>fln</em></span>, </td>
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<td class="paramtype">int</td> <td class="paramname"><span class="paramname"><em>theoryTag</em></span>, </td>
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<td class="paramkey"></td>
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<td class="paramtype">int</td> <td class="paramname"><span class="paramname"><em>noOfAddionalParams</em></span>&#160;)</td>
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<p>If a theory function was found which has newly a different number of parameters, this function will finalize the msr-file, i.e. replacing all temporarily set tags.</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">fln</td><td>file name </td></tr>
<tr><td class="paramname">theoryTag</td><td>theory tag if the changed function </td></tr>
<tr><td class="paramname">noOfAddionalParams</td><td>number of additional fit parameters </td></tr>
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</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00511">511</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">References <a class="el" href="msr2msr_8cpp_source.html#l00425">msr2msr_is_comment()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00454">msr2msr_is_whitespace()</a>, <a class="el" href="msr2msr_8cpp_source.html#l00477">msr2msr_replace()</a>, <a class="el" href="PMusr_8h_source.html#l00185">MSR_TAG_FITPARAMETER</a>, <a class="el" href="PMusr_8h_source.html#l00187">MSR_TAG_THEORY</a>, <a class="el" href="msr2msr_8cpp_source.html#l00056">MSR_THEORY_INTERN_BESSEL</a>, and <a class="el" href="msr2msr_8cpp_source.html#l00055">MSR_THEORY_INTERN_FLD</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00641">main()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a893fb8ea020cc49f3b23786de8668dd1">&#9670;&#160;</a></span>msr2msr_is_comment()</h2>
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<td class="memname">bool msr2msr_is_comment </td>
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<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>str</em></span></td><td>)</td>
<td></td>
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<p>Checks if a msr-line is a comment line</p>
<p><b>return:</b></p><ul>
<li>true if line is a comment line</li>
<li>false otherwise</li>
</ul>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">str</td><td>msr-file line </td></tr>
</table>
</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00425">425</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00511">msr2msr_finalize_theory()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a730a119de1e3455c2ff5bbfc28ca3b24">&#9670;&#160;</a></span>msr2msr_is_whitespace()</h2>
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<td class="memname">bool msr2msr_is_whitespace </td>
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<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>str</em></span></td><td>)</td>
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<p>Checks if a msr-line consists only out of whitespaces.</p>
<p><b>return:</b></p><ul>
<li>true if line is a whitespace</li>
<li>false otherwise</li>
</ul>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">str</td><td>msr-file line </td></tr>
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</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00454">454</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00511">msr2msr_finalize_theory()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a63da02c45c31174652a40b4f025e424f">&#9670;&#160;</a></span>msr2msr_param()</h2>
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<td class="memname">bool msr2msr_param </td>
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<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>str</em></span></td><td>)</td>
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<p>Changes the fit parameter lines to the new msr-file format. In the new msr-file format there is an additional column "Pos_Error". Before a fit takes place the value is set to "none".</p>
<p><b>return:</b></p><ul>
<li>true if everything went smooth</li>
<li>false otherwise</li>
</ul>
<dl class="params"><dt>Parameters</dt><dd>
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<tr><td class="paramname">str</td><td>msr-file fit parameter line </td></tr>
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</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00158">158</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00641">main()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a0d181baa2d2ab9dd9c0a91dc79d5eff3">&#9670;&#160;</a></span>msr2msr_replace()</h2>
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<td class="memname">void msr2msr_replace </td>
<td>(</td>
<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>str</em></span>, </td>
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<td class="paramtype">int</td> <td class="paramname"><span class="paramname"><em>paramNo</em></span>&#160;)</td>
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<p>Replaces temporarily set labels by the proper parameter number.</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">str</td><td>msr-file line </td></tr>
<tr><td class="paramname">paramNo</td><td>parameter number </td></tr>
</table>
</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00477">477</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00511">msr2msr_finalize_theory()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a82491555eb6a8f17a62a36880fc8dd9a">&#9670;&#160;</a></span>msr2msr_run()</h2>
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<td class="memname">bool msr2msr_run </td>
<td>(</td>
<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>str</em></span>, </td>
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<td class="paramtype">const std::size_t</td> <td class="paramname"><span class="paramname"><em>size</em></span>&#160;)</td>
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<p>If the msr-file line is the RUN line, change it to the new format.</p>
<p><b>return:</b></p><ul>
<li>true if everything went smooth</li>
<li>false otherwise</li>
</ul>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">str</td><td>msr-file line </td></tr>
<tr><td class="paramname">size</td><td>size of str </td></tr>
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</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00083">83</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00641">main()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#aa0b5e512709636a0987c44dcfd22d085">&#9670;&#160;</a></span>msr2msr_statistic()</h2>
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<td class="memname">bool msr2msr_statistic </td>
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<p>Filters out the old chi-square related informations. And sets them according to the new scheme.</p>
<p><b>return:</b></p><ul>
<li>true if everything went smooth</li>
<li>false otherwise</li>
</ul>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">str</td><td>msr-file statistic block line </td></tr>
<tr><td class="paramname">size</td><td>size of str </td></tr>
</table>
</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00604">604</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">References <a class="el" href="PStartupHandler_8cpp_source.html#l00106">status</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00641">main()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#afd021d6d9ec19edb3b15634a540962f4">&#9670;&#160;</a></span>msr2msr_syntax()</h2>
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<td class="memname">void msr2msr_syntax </td>
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<p>Sends the usage description to the standard output. </p>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00062">62</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00641">main()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#ae26511dc1058fe0b3a904da22aba6668">&#9670;&#160;</a></span>msr2msr_theory()</h2>
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<td class="memname">bool msr2msr_theory </td>
<td>(</td>
<td class="paramtype">char *</td> <td class="paramname"><span class="paramname"><em>str</em></span>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">int &amp;</td> <td class="paramname"><span class="paramname"><em>tag</em></span>, </td>
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<td class="paramtype">int &amp;</td> <td class="paramname"><span class="paramname"><em>noOfAddionalParams</em></span>&#160;)</td>
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<p>In the theory the table functions needs to be replaced by the numerical ones, and some functions have new a different parameterization.</p>
<p><b>return:</b></p><ul>
<li>true if everything went smooth</li>
<li>false otherwise</li>
</ul>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">str</td><td>msr-file theory line </td></tr>
<tr><td class="paramname">tag</td><td>if a function has new some additional parameters, this flag will be set, such that these new parameters can be added to the fit parameter block </td></tr>
<tr><td class="paramname">noOfAddionalParams</td><td>counts the number of additional parameters needed. </td></tr>
</table>
</dd>
</dl>
<p class="definition">Definition at line <a class="el" href="msr2msr_8cpp_source.html#l00273">273</a> of file <a class="el" href="msr2msr_8cpp_source.html">msr2msr.cpp</a>.</p>
<p class="reference">References <a class="el" href="msr2msr_8cpp_source.html#l00056">MSR_THEORY_INTERN_BESSEL</a>, and <a class="el" href="msr2msr_8cpp_source.html#l00055">MSR_THEORY_INTERN_FLD</a>.</p>
<p class="reference">Referenced by <a class="el" href="msr2msr_8cpp_source.html#l00641">main()</a>.</p>
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