modernized code to C++11 and newer.
This allows to analyze the code by external code analyzers. Since a lot is adopted, the version is changed to 1.4.3 Conflicts: src/classes/PFitter.cpp src/classes/PFourier.cpp src/classes/PMsrHandler.cpp src/classes/PMusrCanvas.cpp src/classes/PRunAsymmetry.cpp src/classes/PRunAsymmetryRRF.cpp src/classes/PRunListCollection.cpp src/classes/PRunSingleHisto.cpp src/classes/PRunSingleHistoRRF.cpp src/classes/PStartupHandler.cpp src/include/PFourier.h src/include/PRunListCollection.h src/musrFT.cpp
This commit is contained in:
729
src/external/nexus/PNeXus.cpp
vendored
729
src/external/nexus/PNeXus.cpp
vendored
File diff suppressed because it is too large
Load Diff
395
src/external/nexus/PNeXus.h
vendored
395
src/external/nexus/PNeXus.h
vendored
@@ -8,7 +8,7 @@
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***************************************************************************/
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/***************************************************************************
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* Copyright (C) 2007-2014 by Andreas Suter *
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* Copyright (C) 2007-2019 by Andreas Suter *
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* andreas.suter@psi.ch *
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* *
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* This program is free software; you can redistribute it and/or modify *
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@@ -32,7 +32,6 @@
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#include <string>
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#include <vector>
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using namespace std;
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#include "napi.h"
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@@ -75,18 +74,18 @@ class PNeXusProp {
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PNeXusProp();
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virtual ~PNeXusProp() {}
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virtual string GetName() { return fName; }
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virtual std::string GetName() { return fName; }
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virtual double GetValue() { return fValue; }
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virtual string GetUnit() { return fUnit; }
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virtual std::string GetUnit() { return fUnit; }
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virtual void SetName(string name) { fName = name; }
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virtual void SetName(std::string name) { fName = name; }
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virtual void SetValue(double val) { fValue = val; }
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virtual void SetUnit(string unit) { fUnit = unit; }
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virtual void SetUnit(std::string unit) { fUnit = unit; }
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private:
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string fName;
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std::string fName;
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double fValue;
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string fUnit;
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std::string fUnit;
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};
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class PNeXusBeam1 {
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@@ -97,14 +96,14 @@ class PNeXusBeam1 {
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virtual bool IsValid(bool strict);
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virtual double GetTotalCounts() { return fTotalCounts; }
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virtual string GetUnits() { return fUnits; }
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virtual std::string GetUnits() { return fUnits; }
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virtual void SetTotalCounts(double counts) { fTotalCounts = counts; }
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virtual void SetUnits(string units) { fUnits = units; }
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virtual void SetUnits(std::string units) { fUnits = units; }
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private:
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double fTotalCounts; ///< total number of counts
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string fUnits; ///< 'units' in which total counts is given, e.g. 'Mev'
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std::string fUnits; ///< 'units' in which total counts is given, e.g. 'Mev'
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};
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class PNeXusCollimator1 {
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@@ -114,11 +113,11 @@ class PNeXusCollimator1 {
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virtual bool IsValid(bool strict) { return true; } // currently only a dummy
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virtual string GetType() { return fType; }
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virtual void SetType(string type) { fType = type; }
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virtual std::string GetType() { return fType; }
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virtual void SetType(std::string type) { fType = type; }
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private:
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string fType;
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std::string fType;
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};
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class PNeXusDetector1 {
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@@ -142,18 +141,18 @@ class PNeXusInstrument1 {
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virtual bool IsValid(bool strict);
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virtual string GetName() { return fName; }
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virtual std::string GetName() { return fName; }
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virtual PNeXusDetector1* GetDetector() { return &fDetector; }
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virtual PNeXusCollimator1* GetCollimator() { return &fCollimator; }
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virtual PNeXusBeam1* GetBeam() { return &fBeam; }
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virtual void SetName(string name) { fName = name; }
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virtual void SetName(std::string name) { fName = name; }
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virtual void SetDetector(PNeXusDetector1 &detector) { fDetector = detector; }
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virtual void SetCollimator(PNeXusCollimator1 &collimator) { fCollimator = collimator; }
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virtual void SetBeam(PNeXusBeam1 &beam) { fBeam = beam; }
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private:
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string fName; ///< instrument name
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std::string fName; ///< instrument name
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PNeXusDetector1 fDetector;
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PNeXusCollimator1 fCollimator;
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PNeXusBeam1 fBeam;
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@@ -166,38 +165,38 @@ class PNeXusSample1 {
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virtual bool IsValid(bool strict);
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virtual string GetName() { return fName; }
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virtual string GetShape() { return fShape; }
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virtual string GetMagneticFieldState() { return fMagneticFieldState; }
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virtual string GetEnvironment() { return fEnvironment; }
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virtual double GetPhysPropValue(string name, bool &ok);
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virtual void GetPhysPropUnit(string name, string &unit, bool &ok);
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virtual std::string GetName() { return fName; }
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virtual std::string GetShape() { return fShape; }
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virtual std::string GetMagneticFieldState() { return fMagneticFieldState; }
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virtual std::string GetEnvironment() { return fEnvironment; }
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virtual double GetPhysPropValue(std::string name, bool &ok);
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virtual void GetPhysPropUnit(std::string name, std::string &unit, bool &ok);
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virtual int IsMagneticFieldVectorAvailable() { return fMagneticFieldVectorAvailable; }
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virtual vector<double> GetMagneticFieldVector() { return fMagneticFieldVector; }
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virtual string GetMagneticFieldVectorUnits() { return fMagneticFieldVectorUnits; }
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virtual string GetMagneticFieldVectorCoordinateSystem() { return fMagneticFieldVectorCoordinateSystem; }
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virtual std::vector<double> GetMagneticFieldVector() { return fMagneticFieldVector; }
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virtual std::string GetMagneticFieldVectorUnits() { return fMagneticFieldVectorUnits; }
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virtual std::string GetMagneticFieldVectorCoordinateSystem() { return fMagneticFieldVectorCoordinateSystem; }
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virtual void SetName(string name) { fName = name; }
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virtual void SetShape(string shape) { fShape = shape; }
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virtual void SetMagneticFieldState(string magFieldState) { fMagneticFieldState = magFieldState; }
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virtual void SetEnvironment(string env) { fEnvironment = env; }
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virtual void SetPhysProp(string name, double value, string unit, int idx=-1);
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virtual void SetName(std::string name) { fName = name; }
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virtual void SetShape(std::string shape) { fShape = shape; }
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virtual void SetMagneticFieldState(std::string magFieldState) { fMagneticFieldState = magFieldState; }
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virtual void SetEnvironment(std::string env) { fEnvironment = env; }
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virtual void SetPhysProp(std::string name, double value, std::string unit, int idx=-1);
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virtual void SetMagneticFieldVectorAvailable(int avail) { fMagneticFieldVectorAvailable = avail; }
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virtual void SetMagneticFieldVector(vector<double> &magVec) { fMagneticFieldVector = magVec; }
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virtual void SetMagneticFieldVectorCoordinateSystem(string coord) { fMagneticFieldVectorCoordinateSystem = coord; }
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virtual void SetMagneticFieldUnits(string units) { fMagneticFieldVectorUnits = units; }
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virtual void SetMagneticFieldVector(std::vector<double> &magVec) { fMagneticFieldVector = magVec; }
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virtual void SetMagneticFieldVectorCoordinateSystem(std::string coord) { fMagneticFieldVectorCoordinateSystem = coord; }
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virtual void SetMagneticFieldUnits(std::string units) { fMagneticFieldVectorUnits = units; }
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private:
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string fName; ///< sample name
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string fShape; ///< sample orientation
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string fMagneticFieldState; ///< magnetic field state, e.g. TF, ZF, ...
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string fEnvironment; ///< sample environment, e.g. CCR, Konti-1, ...
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vector<PNeXusProp> fPhysProp; ///< collects the temperature, magnetic field
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std::string fName; ///< sample name
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std::string fShape; ///< sample orientation
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std::string fMagneticFieldState; ///< magnetic field state, e.g. TF, ZF, ...
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std::string fEnvironment; ///< sample environment, e.g. CCR, Konti-1, ...
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std::vector<PNeXusProp> fPhysProp; ///< collects the temperature, magnetic field
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int fMagneticFieldVectorAvailable; ///< flag '0' magnetic field vector not available, '1' magnetic field vector available
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vector<double> fMagneticFieldVector; ///< magnetic field vector
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string fMagneticFieldVectorUnits; ///< units in which the magnetic field vector is given
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string fMagneticFieldVectorCoordinateSystem; ///< coordinate system, e.g. 'cartesian'
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std::vector<double> fMagneticFieldVector; ///< magnetic field vector
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std::string fMagneticFieldVectorUnits; ///< units in which the magnetic field vector is given
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std::string fMagneticFieldVectorCoordinateSystem; ///< coordinate system, e.g. 'cartesian'
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};
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class PNeXusUser1 {
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@@ -207,15 +206,15 @@ class PNeXusUser1 {
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virtual bool IsValid(bool strict) { return true; } // currently only a dummy
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virtual string GetName() { return fName; }
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virtual string GetExperimentNumber() { return fExperimentNumber; }
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virtual std::string GetName() { return fName; }
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virtual std::string GetExperimentNumber() { return fExperimentNumber; }
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virtual void SetName(string name) { fName = name; }
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virtual void SetExperimentNumber(string expNum) { fExperimentNumber = expNum; }
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virtual void SetName(std::string name) { fName = name; }
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virtual void SetExperimentNumber(std::string expNum) { fExperimentNumber = expNum; }
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private:
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string fName; ///< user name
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string fExperimentNumber; ///< experiment number, RB number at ISIS
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std::string fName; ///< user name
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std::string fExperimentNumber; ///< experiment number, RB number at ISIS
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};
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class PNeXusAlpha1 {
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@@ -244,41 +243,41 @@ class PNeXusData1 {
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virtual bool IsValid(bool strict);
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virtual double GetTimeResolution(string units);
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virtual vector<unsigned int> *GetT0s() { return &fT0; }
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virtual double GetTimeResolution(std::string units);
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virtual std::vector<unsigned int> *GetT0s() { return &fT0; }
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virtual int GetT0(unsigned int idx);
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virtual vector<unsigned int> *GetFirstGoodBins() { return &fFirstGoodBin; }
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virtual std::vector<unsigned int> *GetFirstGoodBins() { return &fFirstGoodBin; }
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virtual int GetFirstGoodBin(unsigned int idx);
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virtual vector<unsigned int> *GetLastGoodBins() { return &fLastGoodBin; }
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virtual std::vector<unsigned int> *GetLastGoodBins() { return &fLastGoodBin; }
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virtual int GetLastGoodBin(unsigned int idx);
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virtual vector<string> *GetHistoNames() { return &fHistoName; }
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virtual void GetHistoName(unsigned int idx, string &name, bool &ok);
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virtual std::vector<std::string> *GetHistoNames() { return &fHistoName; }
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virtual void GetHistoName(unsigned int idx, std::string &name, bool &ok);
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virtual unsigned int GetNoOfHistos() { return fHisto.size(); }
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virtual unsigned int GetHistoLength(unsigned int histoNo=0);
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virtual vector<unsigned int> *GetHisto(unsigned int histoNo);
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virtual vector<int> *GetGrouping() { return &fGrouping; }
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virtual vector<PNeXusAlpha1> *GetAlpha() { return &fAlpha; }
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virtual std::vector<unsigned int> *GetHisto(unsigned int histoNo);
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virtual std::vector<int> *GetGrouping() { return &fGrouping; }
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virtual std::vector<PNeXusAlpha1> *GetAlpha() { return &fAlpha; }
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virtual void SetTimeResolution(double val, string units);
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virtual void SetTimeResolution(double val, std::string units);
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virtual void SetT0(unsigned int t0, int idx=-1);
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virtual void SetFirstGoodBin(unsigned int fgb, int idx=-1);
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virtual void SetLastGoodBin(unsigned int lgb, int idx=-1);
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virtual void FlushHistos();
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virtual void SetHisto(vector<unsigned int> &data, int histoNo=-1);
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virtual void SetHisto(std::vector<unsigned int> &data, int histoNo=-1);
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virtual void FlushGrouping() { fGrouping.clear(); }
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virtual void SetGrouping(vector<int> &grouping) { fGrouping = grouping; }
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virtual void SetGrouping(std::vector<int> &grouping) { fGrouping = grouping; }
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virtual void FlushAlpha() { fAlpha.clear(); }
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virtual void SetAlpha(vector<PNeXusAlpha1> &alpha) { fAlpha = alpha; }
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virtual void SetAlpha(std::vector<PNeXusAlpha1> &alpha) { fAlpha = alpha; }
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private:
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double fTimeResolution; ///< time resolution in (ps)
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vector<unsigned int> fT0;
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vector<unsigned int> fFirstGoodBin;
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vector<unsigned int> fLastGoodBin;
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vector<string> fHistoName;
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vector< vector<unsigned int> > fHisto;
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vector<int> fGrouping;
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vector<PNeXusAlpha1> fAlpha;
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std::vector<unsigned int> fT0;
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std::vector<unsigned int> fFirstGoodBin;
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std::vector<unsigned int> fLastGoodBin;
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std::vector<std::string> fHistoName;
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std::vector< std::vector<unsigned int> > fHisto;
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std::vector<int> fGrouping;
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std::vector<PNeXusAlpha1> fAlpha;
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};
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class PNeXusEntry1 {
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@@ -288,32 +287,32 @@ class PNeXusEntry1 {
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virtual bool IsValid(bool strict);
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virtual string GetProgramName() { return fProgramName; }
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virtual string GetProgramVersion() { return fProgramVersion; }
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virtual std::string GetProgramName() { return fProgramName; }
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virtual std::string GetProgramVersion() { return fProgramVersion; }
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virtual int GetRunNumber() { return fRunNumber; }
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virtual string GetTitle() { return fTitle; }
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virtual string GetNotes() { return fNotes; }
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virtual string GetAnalysis() { return fAnalysis; }
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virtual string GetLaboratory() { return fLaboratory; }
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virtual string GetBeamline() { return fBeamline; }
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virtual string GetStartTime() { return fStartTime; }
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virtual string GetStopTime() { return fStopTime; }
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virtual std::string GetTitle() { return fTitle; }
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virtual std::string GetNotes() { return fNotes; }
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virtual std::string GetAnalysis() { return fAnalysis; }
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virtual std::string GetLaboratory() { return fLaboratory; }
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virtual std::string GetBeamline() { return fBeamline; }
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virtual std::string GetStartTime() { return fStartTime; }
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virtual std::string GetStopTime() { return fStopTime; }
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virtual int GetSwitchingState() { return fSwitchingState; }
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virtual PNeXusUser1* GetUser() { return &fUser; }
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virtual PNeXusSample1* GetSample() { return &fSample; }
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virtual PNeXusInstrument1* GetInstrument() { return &fInstrument; }
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virtual PNeXusData1* GetData() { return &fData; }
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virtual void SetProgramName(string name) { fProgramName = name; }
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virtual void SetProgramVersion(string version) { fProgramVersion = version; }
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virtual void SetProgramName(std::string name) { fProgramName = name; }
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virtual void SetProgramVersion(std::string version) { fProgramVersion = version; }
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virtual void SetRunNumber(int number) { fRunNumber = number; }
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virtual void SetTitle(string title) { fTitle = title; }
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virtual void SetNotes(string notes) { fNotes = notes; }
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virtual void SetAnalysis(string analysis) { fAnalysis = analysis; }
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virtual void SetLaboratory(string lab) { fLaboratory = lab; }
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virtual void SetBeamline(string beamline) { fBeamline = beamline; }
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virtual int SetStartTime(string time);
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virtual int SetStopTime(string time);
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virtual void SetTitle(std::string title) { fTitle = title; }
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virtual void SetNotes(std::string notes) { fNotes = notes; }
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virtual void SetAnalysis(std::string analysis) { fAnalysis = analysis; }
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virtual void SetLaboratory(std::string lab) { fLaboratory = lab; }
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virtual void SetBeamline(std::string beamline) { fBeamline = beamline; }
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virtual int SetStartTime(std::string time);
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virtual int SetStopTime(std::string time);
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virtual int SetSwitchingState(int state);
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virtual void SetUser(PNeXusUser1 &user) { fUser = user; }
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virtual void SetSample(PNeXusSample1 &sample) { fSample = sample; }
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@@ -321,16 +320,16 @@ class PNeXusEntry1 {
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virtual void SetData(PNeXusData1 &data) { fData = data; }
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private:
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string fProgramName; ///< name of the creating program
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string fProgramVersion; ///< version of the creating program
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std::string fProgramName; ///< name of the creating program
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std::string fProgramVersion; ///< version of the creating program
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int fRunNumber; ///< run number
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string fTitle; ///< string containing the run title
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string fNotes; ///< comments
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string fAnalysis; ///< type of muon experiment "muonTD", "ALC", ...
|
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string fLaboratory; ///< name of the laboratory where the data are taken, e.g. PSI, triumf, ISIS, J-Parc
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string fBeamline; ///< name of the beamline used for the experiment, e.g. muE4
|
||||
string fStartTime; ///< start date/time of the run
|
||||
string fStopTime; ///< stop date/time of the run
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||||
std::string fTitle; ///< string containing the run title
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||||
std::string fNotes; ///< comments
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||||
std::string fAnalysis; ///< type of muon experiment "muonTD", "ALC", ...
|
||||
std::string fLaboratory; ///< name of the laboratory where the data are taken, e.g. PSI, triumf, ISIS, J-Parc
|
||||
std::string fBeamline; ///< name of the beamline used for the experiment, e.g. muE4
|
||||
std::string fStartTime; ///< start date/time of the run
|
||||
std::string fStopTime; ///< stop date/time of the run
|
||||
int fSwitchingState; ///< '1' normal data collection, '2' Red/Green mode
|
||||
PNeXusUser1 fUser; ///< NXuser info IDF Version 1
|
||||
PNeXusSample1 fSample; ///< NXsample info IDF Version 1
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@@ -345,18 +344,18 @@ class PNeXusSource2 {
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||||
virtual bool IsValid(bool strict);
|
||||
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||||
virtual string GetName() { return fName; }
|
||||
virtual string GetType() { return fType; }
|
||||
virtual string GetProbe() { return fProbe; }
|
||||
virtual std::string GetName() { return fName; }
|
||||
virtual std::string GetType() { return fType; }
|
||||
virtual std::string GetProbe() { return fProbe; }
|
||||
|
||||
virtual void SetName(string name) { fName = name; }
|
||||
virtual void SetType(string type) { fType = type; }
|
||||
virtual void SetProbe(string probe) { fProbe = probe; }
|
||||
virtual void SetName(std::string name) { fName = name; }
|
||||
virtual void SetType(std::string type) { fType = type; }
|
||||
virtual void SetProbe(std::string probe) { fProbe = probe; }
|
||||
|
||||
private:
|
||||
string fName; ///< facility name
|
||||
string fType; ///< continous muon source, pulsed muon source, low energy muon source, ...
|
||||
string fProbe; ///< positive muon, negative muon
|
||||
std::string fName; ///< facility name
|
||||
std::string fType; ///< continous muon source, pulsed muon source, low energy muon source, ...
|
||||
std::string fProbe; ///< positive muon, negative muon
|
||||
};
|
||||
|
||||
class PNeXusBeamline2 {
|
||||
@@ -366,12 +365,12 @@ class PNeXusBeamline2 {
|
||||
|
||||
virtual bool IsValid(bool strict);
|
||||
|
||||
virtual string GetName() { return fName; }
|
||||
virtual std::string GetName() { return fName; }
|
||||
|
||||
virtual void SetName(string name) { fName = name; }
|
||||
virtual void SetName(std::string name) { fName = name; }
|
||||
|
||||
private:
|
||||
string fName;
|
||||
std::string fName;
|
||||
};
|
||||
|
||||
class PNeXusDetector2 {
|
||||
@@ -380,21 +379,21 @@ class PNeXusDetector2 {
|
||||
virtual ~PNeXusDetector2();
|
||||
|
||||
virtual bool IsValid(bool strict);
|
||||
virtual string GetErrorMsg() { return fErrorMsg; }
|
||||
virtual std::string GetErrorMsg() { return fErrorMsg; }
|
||||
|
||||
virtual string GetDescription() { return fDescription; }
|
||||
virtual double GetTimeResolution(string units);
|
||||
virtual vector<double> *GetRawTime() { return &fRawTime; }
|
||||
virtual string GetRawTimeName() { return fRawTimeName; }
|
||||
virtual string GetRawTimeUnit() { return fRawTimeUnit; }
|
||||
virtual bool IsT0Present() { return (fT0 == 0) ? false : true; }
|
||||
virtual std::string GetDescription() { return fDescription; }
|
||||
virtual double GetTimeResolution(std::string units);
|
||||
virtual std::vector<double> *GetRawTime() { return &fRawTime; }
|
||||
virtual std::string GetRawTimeName() { return fRawTimeName; }
|
||||
virtual std::string GetRawTimeUnit() { return fRawTimeUnit; }
|
||||
virtual bool IsT0Present() { return (fT0 == nullptr) ? false : true; }
|
||||
virtual int GetT0Tag() { return fT0Tag; }
|
||||
virtual int GetT0(int idxp=-1, int idxs=-1);
|
||||
virtual int* GetT0s() { return fT0; }
|
||||
virtual bool IsFirstGoodBinPresent() { return (fFirstGoodBin == 0) ? false : true; }
|
||||
virtual bool IsFirstGoodBinPresent() { return (fFirstGoodBin == nullptr) ? false : true; }
|
||||
virtual int GetFirstGoodBin(int idxp=-1, int idxs=-1);
|
||||
virtual int* GetFirstGoodBins() { return fFirstGoodBin; }
|
||||
virtual bool IsLastGoodBinPresent() { return (fLastGoodBin == 0) ? false : true; }
|
||||
virtual bool IsLastGoodBinPresent() { return (fLastGoodBin == nullptr) ? false : true; }
|
||||
virtual int GetLastGoodBin(int idxp=-1, int idxs=-1);
|
||||
virtual int* GetLastGoodBins() { return fLastGoodBin; }
|
||||
virtual int GetNoOfPeriods() { return fNoOfPeriods; }
|
||||
@@ -403,14 +402,14 @@ class PNeXusDetector2 {
|
||||
virtual int GetHistoValue(int idx_p, int idx_s, int idx_b);
|
||||
virtual int* GetHistos() { return fHisto; }
|
||||
virtual unsigned int GetSpectrumIndexSize() { return fSpectrumIndex.size(); }
|
||||
virtual vector<int> *GetSpectrumIndex() { return &fSpectrumIndex; }
|
||||
virtual std::vector<int> *GetSpectrumIndex() { return &fSpectrumIndex; }
|
||||
virtual int GetSpectrumIndex(unsigned int idx);
|
||||
|
||||
virtual void SetDescription(string description) { fDescription = description; }
|
||||
virtual void SetTimeResolution(double val, string units);
|
||||
virtual void SetRawTime(vector<double> &rawTime);
|
||||
virtual void SetRawTimeName(string rawTimeName) { fRawTimeName = rawTimeName; }
|
||||
virtual void SetRawTimeUnit(string rawTimeUnit) { fRawTimeUnit = rawTimeUnit; }
|
||||
virtual void SetDescription(std::string description) { fDescription = description; }
|
||||
virtual void SetTimeResolution(double val, std::string units);
|
||||
virtual void SetRawTime(std::vector<double> &rawTime);
|
||||
virtual void SetRawTimeName(std::string rawTimeName) { fRawTimeName = rawTimeName; }
|
||||
virtual void SetRawTimeUnit(std::string rawTimeUnit) { fRawTimeUnit = rawTimeUnit; }
|
||||
virtual void SetT0Tag(int tag) { fT0Tag = tag; }
|
||||
virtual int SetT0(int *t0);
|
||||
virtual int SetFirstGoodBin(int *fgb);
|
||||
@@ -419,17 +418,17 @@ class PNeXusDetector2 {
|
||||
virtual void SetNoOfSpectra(int val) { fNoOfSpectra = val; }
|
||||
virtual void SetNoOfBins(int val) { fNoOfBins = val; }
|
||||
virtual int SetHistos(int *histo);
|
||||
virtual void SetSpectrumIndex(vector<int> spectIdx) { fSpectrumIndex = spectIdx; }
|
||||
virtual void SetSpectrumIndex(std::vector<int> spectIdx) { fSpectrumIndex = spectIdx; }
|
||||
virtual void SetSpectrumIndex(int spectIdx, int idx=-1);
|
||||
|
||||
private:
|
||||
string fErrorMsg; ///< internal error message
|
||||
string fDescription; ///< description of the detector
|
||||
std::string fErrorMsg; ///< internal error message
|
||||
std::string fDescription; ///< description of the detector
|
||||
double fTimeResolution; ///< keeps the time resolution in (ps)
|
||||
vector<int> fSpectrumIndex; ///< list of global spectra
|
||||
vector<double> fRawTime; ///< keeps a raw time vector
|
||||
string fRawTimeName; ///< name of the raw time vector
|
||||
string fRawTimeUnit; ///< unit of the raw time vector
|
||||
std::vector<int> fSpectrumIndex; ///< list of global spectra
|
||||
std::vector<double> fRawTime; ///< keeps a raw time vector
|
||||
std::string fRawTimeName; ///< name of the raw time vector
|
||||
std::string fRawTimeUnit; ///< unit of the raw time vector
|
||||
|
||||
int fNoOfPeriods; ///< number of periods or -1 if not defined
|
||||
int fNoOfSpectra; ///< number of spectra or -1 if not defined
|
||||
@@ -449,18 +448,18 @@ class PNeXusInstrument2 {
|
||||
|
||||
virtual bool IsValid(bool strict);
|
||||
|
||||
virtual string GetName() { return fName; }
|
||||
virtual std::string GetName() { return fName; }
|
||||
virtual PNeXusSource2* GetSource() { return &fSource; }
|
||||
virtual PNeXusBeamline2* GetBeamline() { return &fBeamline; }
|
||||
virtual PNeXusDetector2* GetDetector() { return &fDetector; }
|
||||
|
||||
virtual void SetName(string name) { fName = name; }
|
||||
virtual void SetName(std::string name) { fName = name; }
|
||||
virtual void SetSource(PNeXusSource2 &source) { fSource = source; }
|
||||
virtual void SetBeamline(PNeXusBeamline2 &beamline) { fBeamline = beamline; }
|
||||
virtual void SetDetector(PNeXusDetector2 &detector) { fDetector = detector; }
|
||||
|
||||
private:
|
||||
string fName; ///< name of the instrument
|
||||
std::string fName; ///< name of the instrument
|
||||
PNeXusSource2 fSource; ///< details of the muon source used
|
||||
PNeXusBeamline2 fBeamline; ///< beamline description
|
||||
PNeXusDetector2 fDetector; ///< details of the detectors which also includes the data!!
|
||||
@@ -473,28 +472,28 @@ class PNeXusSample2 {
|
||||
|
||||
virtual bool IsValid(bool strict);
|
||||
|
||||
virtual string GetName() { return fName; }
|
||||
virtual string GetDescription() { return fDescription; }
|
||||
virtual string GetMagneticFieldState() { return fMagneticFieldState; }
|
||||
virtual string GetEnvironmentTemp() { return fEnvironmentTemp; }
|
||||
virtual string GetEnvironmentField() { return fEnvironmentField; }
|
||||
virtual double GetPhysPropValue(string name, bool &ok);
|
||||
virtual void GetPhysPropUnit(string name, string &unit, bool &ok);
|
||||
virtual std::string GetName() { return fName; }
|
||||
virtual std::string GetDescription() { return fDescription; }
|
||||
virtual std::string GetMagneticFieldState() { return fMagneticFieldState; }
|
||||
virtual std::string GetEnvironmentTemp() { return fEnvironmentTemp; }
|
||||
virtual std::string GetEnvironmentField() { return fEnvironmentField; }
|
||||
virtual double GetPhysPropValue(std::string name, bool &ok);
|
||||
virtual void GetPhysPropUnit(std::string name, std::string &unit, bool &ok);
|
||||
|
||||
virtual void SetName(string name) { fName = name; }
|
||||
virtual void SetDescription(string description) { fDescription = description; }
|
||||
virtual void SetMagneticFieldState(string magFieldState) { fMagneticFieldState = magFieldState; }
|
||||
virtual void SetEnvironmentTemp(string env) { fEnvironmentTemp = env; }
|
||||
virtual void SetEnvironmentField(string env) { fEnvironmentField = env; }
|
||||
virtual void SetPhysProp(string name, double value, string unit, int idx=-1);
|
||||
virtual void SetName(std::string name) { fName = name; }
|
||||
virtual void SetDescription(std::string description) { fDescription = description; }
|
||||
virtual void SetMagneticFieldState(std::string magFieldState) { fMagneticFieldState = magFieldState; }
|
||||
virtual void SetEnvironmentTemp(std::string env) { fEnvironmentTemp = env; }
|
||||
virtual void SetEnvironmentField(std::string env) { fEnvironmentField = env; }
|
||||
virtual void SetPhysProp(std::string name, double value, std::string unit, int idx=-1);
|
||||
|
||||
private:
|
||||
string fName; ///< sample name
|
||||
string fDescription; ///< sample description
|
||||
string fMagneticFieldState; ///< magnetic field state, e.g. TF, ZF, ...
|
||||
string fEnvironmentTemp; ///< sample environment related to temperature, e.g. CCR, Konti-1, ...
|
||||
string fEnvironmentField; ///< sample environment related to field, e.g. WEW-Bruker
|
||||
vector<PNeXusProp> fPhysProp; ///< collects the temperature, magnetic field
|
||||
std::string fName; ///< sample name
|
||||
std::string fDescription; ///< sample description
|
||||
std::string fMagneticFieldState; ///< magnetic field state, e.g. TF, ZF, ...
|
||||
std::string fEnvironmentTemp; ///< sample environment related to temperature, e.g. CCR, Konti-1, ...
|
||||
std::string fEnvironmentField; ///< sample environment related to field, e.g. WEW-Bruker
|
||||
std::vector<PNeXusProp> fPhysProp; ///< collects the temperature, magnetic field
|
||||
};
|
||||
|
||||
class PNeXusUser2 {
|
||||
@@ -504,12 +503,12 @@ class PNeXusUser2 {
|
||||
|
||||
virtual bool IsValid(bool strict) { return true; } // currently only a dummy
|
||||
|
||||
virtual string GetName() { return fName; }
|
||||
virtual std::string GetName() { return fName; }
|
||||
|
||||
virtual void SetName(string name) { fName = name; }
|
||||
virtual void SetName(std::string name) { fName = name; }
|
||||
|
||||
private:
|
||||
string fName; ///< user name
|
||||
std::string fName; ///< user name
|
||||
};
|
||||
|
||||
class PNeXusEntry2 {
|
||||
@@ -519,41 +518,41 @@ class PNeXusEntry2 {
|
||||
|
||||
virtual bool IsValid(bool strict);
|
||||
|
||||
virtual string GetErrorMsg() { return fErrorMsg; }
|
||||
virtual string GetDefinition() { return fDefinition; }
|
||||
virtual string GetProgramName() { return fProgramName; }
|
||||
virtual string GetProgramVersion() { return fProgramVersion; }
|
||||
virtual std::string GetErrorMsg() { return fErrorMsg; }
|
||||
virtual std::string GetDefinition() { return fDefinition; }
|
||||
virtual std::string GetProgramName() { return fProgramName; }
|
||||
virtual std::string GetProgramVersion() { return fProgramVersion; }
|
||||
virtual int GetRunNumber() { return fRunNumber; }
|
||||
virtual string GetTitle() { return fTitle; }
|
||||
virtual string GetStartTime() { return fStartTime; }
|
||||
virtual string GetStopTime() { return fStopTime; }
|
||||
virtual string GetExperimentIdentifier() { return fExperimentIdentifier; }
|
||||
virtual std::string GetTitle() { return fTitle; }
|
||||
virtual std::string GetStartTime() { return fStartTime; }
|
||||
virtual std::string GetStopTime() { return fStopTime; }
|
||||
virtual std::string GetExperimentIdentifier() { return fExperimentIdentifier; }
|
||||
virtual PNeXusUser2* GetUser() { return &fUser; }
|
||||
virtual PNeXusSample2* GetSample() { return &fSample; }
|
||||
virtual PNeXusInstrument2* GetInstrument() { return &fInstrument; }
|
||||
|
||||
virtual void SetDefinition(string def) { fDefinition = def; }
|
||||
virtual void SetProgramName(string name) { fProgramName = name; }
|
||||
virtual void SetProgramVersion(string version) { fProgramVersion = version; }
|
||||
virtual void SetDefinition(std::string def) { fDefinition = def; }
|
||||
virtual void SetProgramName(std::string name) { fProgramName = name; }
|
||||
virtual void SetProgramVersion(std::string version) { fProgramVersion = version; }
|
||||
virtual void SetRunNumber(int number) { fRunNumber = number; }
|
||||
virtual void SetTitle(string title) { fTitle = title; }
|
||||
virtual int SetStartTime(string time);
|
||||
virtual int SetStopTime(string time);
|
||||
virtual void SetExperimentIdentifier(string expId) { fExperimentIdentifier = expId; }
|
||||
virtual void SetTitle(std::string title) { fTitle = title; }
|
||||
virtual int SetStartTime(std::string time);
|
||||
virtual int SetStopTime(std::string time);
|
||||
virtual void SetExperimentIdentifier(std::string expId) { fExperimentIdentifier = expId; }
|
||||
virtual void SetUser(PNeXusUser2 &user) { fUser = user; }
|
||||
virtual void SetSample(PNeXusSample2 &sample) { fSample = sample; }
|
||||
virtual void SetInstrument(PNeXusInstrument2 &instrument) { fInstrument = instrument; }
|
||||
|
||||
private:
|
||||
string fErrorMsg; ///< internal error message
|
||||
string fDefinition; ///< the template (DTD name) on which the entry was based, e.g. 'pulsedTD'
|
||||
string fProgramName; ///< name of the creating program
|
||||
string fProgramVersion; ///< version of the creating program
|
||||
std::string fErrorMsg; ///< internal error message
|
||||
std::string fDefinition; ///< the template (DTD name) on which the entry was based, e.g. 'pulsedTD'
|
||||
std::string fProgramName; ///< name of the creating program
|
||||
std::string fProgramVersion; ///< version of the creating program
|
||||
int fRunNumber; ///< run number
|
||||
string fTitle; ///< string containing the run title
|
||||
string fStartTime; ///< start date/time of the run
|
||||
string fStopTime; ///< stop date/time of the run
|
||||
string fExperimentIdentifier; ///< experiment number, (for ISIS, the RB number)
|
||||
std::string fTitle; ///< string containing the run title
|
||||
std::string fStartTime; ///< start date/time of the run
|
||||
std::string fStopTime; ///< stop date/time of the run
|
||||
std::string fExperimentIdentifier; ///< experiment number, (for ISIS, the RB number)
|
||||
PNeXusUser2 fUser; ///< NXuser info IDF Version 2
|
||||
PNeXusSample2 fSample; ///< NXsample info IDF Version 2
|
||||
PNeXusInstrument2 fInstrument; ///< NXinstrument inf IDF Version 2
|
||||
@@ -566,56 +565,56 @@ class PNeXus {
|
||||
virtual ~PNeXus();
|
||||
|
||||
virtual int GetIdfVersion() { return fIdfVersion; }
|
||||
virtual string GetFileName() { return fFileName; }
|
||||
virtual string GetFileTime() { return fFileTime; }
|
||||
virtual std::string GetFileName() { return fFileName; }
|
||||
virtual std::string GetFileTime() { return fFileTime; }
|
||||
|
||||
virtual void SetIdfVersion(unsigned int idf);
|
||||
virtual void SetFileName(string name) { fFileName = name; }
|
||||
virtual void SetFileTime(string time) { fFileTime = time; }
|
||||
virtual void SetFileName(std::string name) { fFileName = name; }
|
||||
virtual void SetFileTime(std::string time) { fFileTime = time; }
|
||||
|
||||
virtual PNeXusEntry1* GetEntryIdf1() { return fNxEntry1; }
|
||||
virtual PNeXusEntry2* GetEntryIdf2() { return fNxEntry2; }
|
||||
|
||||
virtual bool IsValid(bool strict=false);
|
||||
virtual int GetErrorCode() { return fErrorCode; }
|
||||
virtual string GetErrorMsg() { return fErrorMsg; }
|
||||
virtual std::string GetErrorMsg() { return fErrorMsg; }
|
||||
|
||||
virtual vector<unsigned int>* GetGroupedHisto(unsigned int idx);
|
||||
virtual std::vector<unsigned int>* GetGroupedHisto(unsigned int idx);
|
||||
|
||||
virtual int ReadFile(const char *fileName);
|
||||
virtual int WriteFile(const char *fileName, const char *fileType="hdf4", const unsigned int idf=2);
|
||||
|
||||
virtual void SetCreator(string str) { fCreator = str; }
|
||||
virtual void SetCreator(std::string str) { fCreator = str; }
|
||||
|
||||
virtual void Dump();
|
||||
|
||||
private:
|
||||
bool fValid;
|
||||
int fErrorCode;
|
||||
string fErrorMsg;
|
||||
std::string fErrorMsg;
|
||||
|
||||
string fNeXusVersion; ///< version of the NeXus API used in writing the file
|
||||
string fFileFormatVersion; ///< version of the HDF, HDF5, or XML library used to create the file (IDF 2 only)
|
||||
std::string fNeXusVersion; ///< version of the NeXus API used in writing the file
|
||||
std::string fFileFormatVersion; ///< version of the HDF, HDF5, or XML library used to create the file (IDF 2 only)
|
||||
|
||||
unsigned int fIdfVersion; ///< version of the instrument definition
|
||||
string fFileName; ///< file name of the original NeXus file to assist identification if the external name has been changed
|
||||
string fFileTime; ///< date and time of file creating (IDF 2 only)
|
||||
std::string fFileName; ///< file name of the original NeXus file to assist identification if the external name has been changed
|
||||
std::string fFileTime; ///< date and time of file creating (IDF 2 only)
|
||||
NXhandle fFileHandle;
|
||||
|
||||
string fCreator; ///< facility of program where the file originated
|
||||
std::string fCreator; ///< facility of program where the file originated
|
||||
|
||||
PNeXusEntry1 *fNxEntry1; ///< NXentry for IDF 1
|
||||
PNeXusEntry2 *fNxEntry2; ///< NXentry for IDF 2
|
||||
|
||||
vector< vector<unsigned int> > fGroupedHisto;
|
||||
std::vector< std::vector<unsigned int> > fGroupedHisto;
|
||||
|
||||
virtual void Init();
|
||||
virtual bool ErrorHandler(NXstatus status, int errCode, const string &errMsg);
|
||||
virtual NXstatus GetStringData(string &str);
|
||||
virtual NXstatus GetStringAttr(string attr, string &str);
|
||||
virtual bool ErrorHandler(NXstatus status, int errCode, const std::string &errMsg);
|
||||
virtual NXstatus GetStringData(std::string &str);
|
||||
virtual NXstatus GetStringAttr(std::string attr, std::string &str);
|
||||
virtual int GetDataSize(int type);
|
||||
virtual NXstatus GetDoubleVectorData(vector<double> &data);
|
||||
virtual NXstatus GetIntVectorData(vector<int> &data);
|
||||
virtual NXstatus GetDoubleVectorData(std::vector<double> &data);
|
||||
virtual NXstatus GetIntVectorData(std::vector<int> &data);
|
||||
|
||||
virtual int ReadFileIdf1();
|
||||
virtual int ReadFileIdf2();
|
||||
@@ -628,8 +627,8 @@ class PNeXus {
|
||||
virtual bool IsValidIdf1(bool strict);
|
||||
virtual bool IsValidIdf2(bool strict);
|
||||
|
||||
virtual bool SearchInGroup(string str, string tag, NXname &nxname, NXname &nxclass, int &dataType);
|
||||
virtual bool SearchAttrInData(string str, int &length, int &dataType);
|
||||
virtual bool SearchInGroup(std::string str, std::string tag, NXname &nxname, NXname &nxclass, int &dataType);
|
||||
virtual bool SearchAttrInData(std::string str, int &length, int &dataType);
|
||||
};
|
||||
|
||||
#endif // _PNEXUS_H_
|
||||
|
||||
Reference in New Issue
Block a user