LMU/musrfit
5
0
Fork 0
Code Issues 5 Pull Requests Actions Packages Projects Releases 4 Activity

docu update

Browse Source
This commit is contained in:
suter_a
2017-05-14 20:42:46 +02:00
parent ceaf7d0c6a
commit 9bdcdcc661
39 changed files with 472 additions and 292 deletions
Download Patch File Download Diff File Expand all files Collapse all files

31
doc/html/user/MUSR/TutorialSingleHisto.html
View File

@@ -1,7 +1,7 @@
<!DOCTYPE html><html lang="en">
<!-- Mirrored from intranet.psi.ch/MUSR/TutorialSingleHisto?cover=print by HTTrack Website Copier/3.x [XR&CO'2010], Fri, 16 Dec 2016 16:00:55 GMT -->
<!-- Added by HTTrack --><meta http-equiv="content-type" content="text/html;charset=utf-8"><!-- /Added by HTTrack -->
<!-- Mirrored from intranet.psi.ch/MUSR/TutorialSingleHisto?cover=print by HTTrack Website Copier/3.x [XR&CO'2014], Sun, 14 May 2017 18:08:30 GMT -->
<!-- Added by HTTrack --><meta http-equiv="content-type" content="text/html;charset=utf-8" /><!-- /Added by HTTrack -->
<head>
<link rel="stylesheet" href="../pub/System/HeadlinesPlugin/style.css" type="text/css" media="all" />
<title> MUSR :: TutorialSingleHisto</title>
@@ -14,10 +14,10 @@
<meta name="apple-mobile-web-app-status-bar-style" content="black-translucent" />
<link rel="icon" href="../pub/Main/WebPreferences/favicon.ico" type="image/x-icon" />
<link rel="shortcut icon" href="../pub/Main/WebPreferences/favicon.ico" type="image/x-icon" />
<link rel="alternate" href="https://intranet.psi.ch/wiki/bin/edit/MUSR/TutorialSingleHisto?t=1481904042" type="application/x-wiki" title="edit TutorialSingleHisto" />
<link rel="alternate" href="https://intranet.psi.ch/wiki/bin/edit/MUSR/TutorialSingleHisto?t=1494785295" type="application/x-wiki" title="edit TutorialSingleHisto" />
<meta name="TEXT_NUM_TOPICS" content="Number of topics:" />
<meta name="TEXT_MODIFY_SEARCH" content="Modify search" />
<meta name="robots" content="noindex" /><link rel="alternate" type="application/rss+xml" title="RSS Feed" href="WebRsshtml.html" />
<meta name="robots" content="noindex" /><link rel="alternate" type="application/rss+xml" title="RSS Feed" href="WebRss" />
<base /><!--[if IE]></base><![endif]--><style class='head TABLEPLUGIN_default' type="text/css" media="all">
body .foswikiTable {border-width:1px}
body .foswikiTable .tableSortIcon img {padding-left:.3em; vertical-align:text-bottom}
@@ -32,8 +32,6 @@ body .foswikiTable tr.foswikiTableRowdataBg0 td.foswikiSortedCol {background-col
body .foswikiTable tr.foswikiTableRowdataBg1 td {background-color:#f7f7f6}
body .foswikiTable tr.foswikiTableRowdataBg1 td.foswikiSortedCol {background-color:#f0f0ee}
</style><!--TABLEPLUGIN_default-->
<link class='head SMILIESPLUGIN' rel='stylesheet' href='../pub/System/SmiliesPlugin/smilies.css' type='text/css' media='all' /><!--SMILIESPLUGIN-->
<link class='head CLASSIFICATIONPLUGIN::CSS' rel="stylesheet" href="../pub/System/ClassificationPlugin/styles.css" media="all" /><!--CLASSIFICATIONPLUGIN::CSS-->
<style class='head TABLEPLUGIN_specific' type="text/css" media="all">
body .foswikiTable#tableTutorialSingleHisto1 td {vertical-align:middle; vertical-align:top}
body .foswikiTable#tableTutorialSingleHisto1 td.foswikiTableCol0 {text-align:left}
@@ -52,10 +50,12 @@ body .foswikiTable#tableTutorialSingleHisto1 th.foswikiSortedCol {background-col
body .foswikiTable#tableTutorialSingleHisto1 tr.foswikiTableRowdataBg0 td {background-color:#ffffff}
body .foswikiTable#tableTutorialSingleHisto1 tr.foswikiTableRowdataBg0 td.foswikiSortedCol {background-color:#f5f5f5}
</style><!--TABLEPLUGIN_specific-->
<link class='head JQUERYPLUGIN::TWISTY' rel='stylesheet' href='../pub/System/TwistyPlugin/twisty327a.css?version=1.6.0' type='text/css' media='all' /><!--JQUERYPLUGIN::TWISTY: requires= missing ids: JavascriptFiles/foswikiPref-->
<link class='head IMAGEPLUGIN' rel="stylesheet" href="../pub/System/ImagePlugin/style.css" type="text/css" media="all" /><!--IMAGEPLUGIN-->
<link class='head JQUERYPLUGIN::COMMENT' rel='stylesheet' href='../pub/System/CommentPlugin/commentf5b6.css?version=3.0' type='text/css' media='all' /><!--JQUERYPLUGIN::COMMENT-->
<link class='head FOOTNOTEPLUGIN_LINKCSS' rel="stylesheet" href="../pub/System/FootNotePlugin/styles.css" type="text/css" media="all" /><!--FOOTNOTEPLUGIN_LINKCSS--><link rel='stylesheet' href='../pub/System/SkinTemplates/base.css' media='all' type='text/css' />
<link class='head CLASSIFICATIONPLUGIN::CSS' rel="stylesheet" href="../pub/System/ClassificationPlugin/styles.css" media="all" /><!--CLASSIFICATIONPLUGIN::CSS-->
<link class='head JQUERYPLUGIN::TWISTY' rel='stylesheet' href='../pub/System/TwistyPlugin/twisty327a.css?version=1.6.0' type='text/css' media='all' /><!--JQUERYPLUGIN::TWISTY: requires= missing ids: JavascriptFiles/foswikiPref-->
<link class='head FOOTNOTEPLUGIN_LINKCSS' rel="stylesheet" href="../pub/System/FootNotePlugin/styles.css" type="text/css" media="all" /><!--FOOTNOTEPLUGIN_LINKCSS-->
<link class='head SMILIESPLUGIN' rel='stylesheet' href='../pub/System/SmiliesPlugin/smilies.css' type='text/css' media='all' /><!--SMILIESPLUGIN-->
<link class='head JQUERYPLUGIN::COMMENT' rel='stylesheet' href='../pub/System/CommentPlugin/commentf5b6.css?version=3.0' type='text/css' media='all' /><!--JQUERYPLUGIN::COMMENT--><link rel='stylesheet' href='../pub/System/SkinTemplates/base.css' media='all' type='text/css' />
<style type="text/css" media="all">
@import url('../pub/System/PatternSkinTheme/layout.css');
@import url('../pub/System/PatternSkinTheme2009/style.css');
@@ -138,12 +138,12 @@ body .foswikiTable#tableTutorialSingleHisto1 tr.foswikiTableRowdataBg0 td.foswik
<!--JQUERYPLUGIN::MIGRATE-->
<!--JQUERYPLUGIN::LIVEQUERY-->
<!--JQUERYPLUGIN::FOSWIKI-->
<!--JQUERYPLUGIN::FOSWIKI::PREFERENCES-->
<!--JavascriptFiles/foswikiString-->
<!--JavascriptFiles/foswikiPref-->
<!--JQUERYPLUGIN::TWISTY-->
<!--JQUERYPLUGIN::COMMENT-->
<!--JavascriptFiles/foswikiForm-->
<!--JQUERYPLUGIN::COMMENT-->
<!--JQUERYPLUGIN::FOSWIKI::PREFERENCES-->
<!--PatternSkin/pattern--><link class='head FOOTNOTEPLUGIN_LINKCSS' rel="stylesheet" href="../pub/System/FootNotePlugin/styles.css" type="text/css" media="all" /><!--FOOTNOTEPLUGIN_LINKCSS-->
</head>
<body class="foswikiNoJs patternViewPage patternPrintPage">
@@ -270,7 +270,7 @@ STATISTIC --- 2011-07-09 10:58:44
</li></ul>
<p></p>
<h1 id="A_2_Determine_t0_and_the_data_range_using_61musrt0_61"> 2 Determine <i>t</i><sub>0</sub> and the data range using <code>musrt0</code> </h1>
Before the given model can be fitted to the data, the data ranges and time zeros of the different RUN blocks have to be set correctly. This can be achieved using <code><a href="MusrFit.html#MusrT0">musrt0</a></code>. Starting this program by selecting the <img alt="musrt0.png" src="../pub/MUSR/MusrGui/musrt0.png" /> button in <code>musredit</code> or calling from a terminal <pre>musrt0 3110&#95;tutorial.msr</pre> opens an interactive window plotting the data of the first RUN block:<br />
Before the given model can be fitted to the data, the data ranges and time zeros of the different RUN blocks have to be set correctly. This can be achieved using <code><a href="MusrFit.html#MusrT0">musrt0</a></code>. Starting this program by selecting the <img alt="musrt0.png" src="../pub/MUSR/MusrGui/musrt0.html" /> button in <code>musredit</code> or calling from a terminal <pre>musrt0 3110&#95;tutorial.msr</pre> opens an interactive window plotting the data of the first RUN block:<br />
<img class='imagePlain imagePlain_center ' src='../pub/MUSR/TutorialSingleHisto/musrt0-1.png' alt='musrt0-1' title='musrt0-1.png' width='708' height='529' style='' /><br />
The green line (at bin 1) represents time zero, the blue lines the start (at bin 1) and end (at bin 8000) of the data range and the optional red lines give the limits of the background range (if the background shall not be determined by the fit). All lines can be either dragged to reasonable locations or set by pressing the corresponding keyboard shortcuts. In the example the time zero can be set by pressing <strong>T</strong> (which moves the green line to the bin containing the maximum number of counts), the start of the data range should be set to about five bins later by zooming into the graph around bin 250 and pressing <strong>d</strong> when the cursor is found at a suitable location:<br />
<img class='imagePlain imagePlain_center ' src='../pub/MUSR/TutorialSingleHisto/igp_9c0f9b31d4414f37be0d3d171836fe63_musrt0-2.png' alt='musrt0-2' title='musrt0-2.png' width='688' height='529' style='' /><br />
@@ -278,7 +278,7 @@ After all lines have been adjusted for the first histogram, one can go on to the
A full description of <code>musrt0</code> can be found <a href="MusrFit.html#MusrT0">here</a>.
<p></p>
<h1 id="A_3_Fit_the_model_to_the_data_using_61musrfit_61"> 3 Fit the model to the data using <code>musrfit</code> </h1>
Now that the basics of the <code>msr</code> file have been introduced and the necessary adjustments have been done one can proceed with fitting the specified model to the data. This is done by selecting the <img alt="musrfit.png" src="../pub/MUSR/MusrGui/musrfit.png" /> button in <code>musredit</code> or calling from a terminal <pre>musrfit 3110&#95;tutorial.msr</pre>
Now that the basics of the <code>msr</code> file have been introduced and the necessary adjustments have been done one can proceed with fitting the specified model to the data. This is done by selecting the <img alt="musrfit.png" src="../pub/MUSR/MusrGui/musrfit.html" /> button in <code>musredit</code> or calling from a terminal <pre>musrfit 3110&#95;tutorial.msr</pre>
<p></p>
After the fitting procedure has finished the <code>msr</code> file is updated and contains the newly determined values of the fit parameters.
<p></p>
@@ -298,7 +298,7 @@ Assuming the successive runs <strong>3111</strong> through <strong>3114</strong>
From the terminal this would be done as follows:<pre>
msr2data 3110 3114 &#95;tutorial fit-3110 -o tutorial-T-dependence.dat data
</pre>
To achieve the same in <code>musredit</code> one selects <img alt="musrmsr2data.png" src="../pub/MUSR/MusrGui/musrmsr2data.png" /> and fills the form accordingly:<br />
To achieve the same in <code>musredit</code> one selects <img alt="musrmsr2data.png" src="../pub/MUSR/MusrGui/musrmsr2data.html" /> and fills the form accordingly:<br />
<img class='imagePlain imagePlain_center ' src='../pub/MUSR/TutorialSingleHisto/msr2data.png' alt='msr2data' title='msr2data.png' width='612' height='605' style='' />
<p></p>
<h1 id="A_6_Further_reading"> 6 Further reading </h1>
@@ -401,6 +401,5 @@ Topic revision: <span class='patternRevInfo'>02 Sep 2011, wojek</span></div>
</body>
<!-- Mirrored from intranet.psi.ch/MUSR/TutorialSingleHisto?cover=print by HTTrack Website Copier/3.x [XR&CO'2010], Fri, 16 Dec 2016 16:00:58 GMT -->
<!-- Added by HTTrack --><meta http-equiv="content-type" content="text/html;charset=utf-8"><!-- /Added by HTTrack -->
<!-- Mirrored from intranet.psi.ch/MUSR/TutorialSingleHisto?cover=print by HTTrack Website Copier/3.x [XR&CO'2014], Sun, 14 May 2017 18:08:33 GMT -->
</html>