some memory leak 'fixes'

src/classes/Makefile.PMusr

@@ -42,7 +42,7 @@ endif
 # -- Linux
 ifeq ($(OS),LINUX)
 CXX           = g++
-CXXFLAGS      = -O3 -Wall -Wno-trigraphs -fPIC
+CXXFLAGS      = -g -O3 -Wall -Wno-trigraphs -fPIC
 PMUSRPATH     = ../include
 MNPATH        = $(ROOTSYS)/include
 GSLPATH       = /usr/include/gsl

src/classes/PFitter.cpp

@@ -103,6 +103,16 @@ PFitter::~PFitter()
 {
   fCmdList.clear();
 
+  if (fMnUserParamState) {
+    delete fMnUserParamState;
+    fMnUserParamState = 0;
+  }
+
+  if (fFcnMin) {
+    delete fFcnMin;
+    fFcnMin = 0;
+  }
+
   if (fFitterFcn) {
     delete fFitterFcn;
     fFitterFcn = 0;
@@ -831,13 +841,17 @@ bool PFitter::ExecuteSave()
         hcorr->Draw("COLZTEXT");
       else
         hcorr->Draw("COLZ");
-      ccorr->Write();
+      ccorr->Write("ccorr", TObject::kOverwrite, sizeof(ccorr));
       ff.Close();
       // clean up
-      if (ccorr)
+      if (ccorr) {
         delete ccorr;
-      if (hcorr)
+        ccorr = 0;
+      }
+      if (hcorr) {
         delete hcorr;
+        hcorr = 0;
+      }
     }
     parNo.clear(); // clean up
   } else {

src/classes/PMsrHandler.cpp

@@ -96,6 +96,11 @@ PMsrHandler::~PMsrHandler()
   fPlots.clear();
   fStatistic.fStatLines.clear();
   fParamInUse.clear();
+
+  if (fFuncHandler) {
+    delete fFuncHandler;
+    fFuncHandler = 0;
+  }
 }
 
 //--------------------------------------------------------------------------

src/classes/PRunDataHandler.cpp

@@ -1660,8 +1660,11 @@ bool PRunDataHandler::IsWhitespace(const char *str)
 {
   unsigned int i=0;
 
-  while (isblank(str[i]) || (iscntrl(str[i])) && str[i] != 0)
+  while (isblank(str[i]) || iscntrl(str[i])) {
+    if (str[i] == 0)
+      break;
     i++;
+  }
 
   if (i == strlen(str))
     return true;

src/classes/PTheory.cpp

@@ -301,15 +301,8 @@ PTheory::~PTheory()
   fLFIntegral.clear();
   fDynLFFuncValue.clear();
 
-  if (fMul) {
-    delete fMul;
-    fMul = 0;
-  }
-
-  if (fAdd) {
-    delete fAdd;
-    fAdd = 0;
-  }
+  // recursive clean up
+  CleanUp(this);
 
   if (fUserFcn) {
     delete fUserFcn;
@@ -664,6 +657,30 @@ double PTheory::Func(register double t, const PDoubleVector& paramValues, const
   return 0.0;
 }
 
+//--------------------------------------------------------------------------
+/**
+ * <p> Recursively clean up theory
+ *
+ * \param theo
+ */
+void PTheory::CleanUp(PTheory *theo)
+{
+  if (theo->fMul) { // '*' present
+    CleanUp(theo->fMul);
+    if (theo->fAdd) {
+      CleanUp(theo->fAdd);
+      delete theo;
+      theo = 0;
+    }
+  } else { // '*' NOT present
+    if (theo->fAdd) {
+      CleanUp(theo->fAdd);
+      delete theo;
+      theo = 0;
+    }
+  }
+}
+
 //--------------------------------------------------------------------------
 /**
  * <p>

src/include/PTheory.h

@@ -199,6 +199,7 @@ class PTheory
     virtual double Func(register double t, const PDoubleVector& paramValues, const PDoubleVector& funcValues) const;
 
   private:
+    virtual void CleanUp(PTheory *theo);
     virtual int SearchDataBase(TString name);
     virtual void MakeCleanAndTidyTheoryBlock(PMsrLines* fullTheoryBlock);
     virtual void MakeCleanAndTidyPolynom(unsigned int i, PMsrLines* fullTheoryBlock);

src/msr2msr.cpp

@@ -351,7 +351,7 @@ int main(int argc, char *argv[])
 
   // read input file and write output file
   char str[256];
-  int  tag;
+  int  tag = -1;
   bool success = true;
   while (!fin.eof() && success) {
     fin.getline(str, sizeof(str));

src/musrgui/musrgui_startup.xml

@@ -123,10 +123,10 @@
     </func>
     <func>
       <name>internFld</name>
-      <comment>(phase frequency Trate Lrate)</comment>
+      <comment>(fraction phase frequency Trate Lrate)</comment>
       <label>internal Lorentz field</label>
       <pixmap>internalField.png</pixmap>
-      <params>4</params>
+      <params>5</params>
     </func>
     <func>
       <name>TFieldCos</name>