Partial implementation of global fit option using msr2data.
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parent
2e2f4554a9
commit
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1162
src/external/MuSRFitGUI/MSR.pm
vendored
1162
src/external/MuSRFitGUI/MSR.pm
vendored
File diff suppressed because it is too large
Load Diff
82
src/external/MuSRFitGUI/MuSRFit4.pm
vendored
82
src/external/MuSRFitGUI/MuSRFit4.pm
vendored
@ -282,13 +282,12 @@ sub CreateAllInput()
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$All{"LRBF"} = this->{ui}->histsLRBF->text;
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my @Hists = split(/,/, $All{"LRBF"} );
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# Lifetime corrections in enabled/visible only for SingleHis fits
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if ( $All{"FitAsyType"} eq "Asymmetry" ) {
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this->{ui}->ltc->setHidden(1);
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$All{"fittype"}=2;
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}
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elsif ( $All{"FitAsyType"} eq "SingleHist" ) {
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if ( $All{"FitAsyType"} eq "SingleHist" ) {
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this->{ui}->ltc->setHidden(0);
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$All{"fittype"}=0;
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} else {
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this->{ui}->ltc->setHidden(1);
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$All{"fittype"}=2;
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}
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# From Fitting Tab
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@ -419,10 +418,9 @@ sub CreateAllInput()
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my $Parameters=$Paramcomp[$Component-1];
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my @Params = split( /\s+/, $Parameters );
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if ( $Component == 1 && $All{"FitAsyType"} eq "Asymmetry" ) {
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if ( $Component == 1 && ($All{"FitAsyType"} eq "Asymmetry" || $All{"FitAsyType"} eq "AsymmetryGLB" )) {
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unshift( @Params, "Alpha" );
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}
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elsif ( $Component == 1 && $All{"FitAsyType"} eq "SingleHist" ) {
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} elsif ( $Component == 1 && $All{"FitAsyType"} eq "SingleHist" ) {
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unshift( @Params, ( "No", "NBg" ) );
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}
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@ -441,7 +439,7 @@ sub CreateAllInput()
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}
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# Is there any point of sharing, multiple runs?
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if ( $#RUNS == 0 && $All{"FitAsyType"} eq "Asymmetry") {
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if ( $#RUNS == 0 && ($All{"FitAsyType"} eq "Asymmetry" || $All{"FitAsyType"} eq "AsymmetryGLB")) {
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$Shared = 1;
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}
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elsif ( $#RUNS == 0 && $#Hists == 0 && $All{"FitAsyType"} eq "SingleHist" ) {
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@ -532,49 +530,54 @@ sub CallMSRCreate()
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}
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if ($Answer) {
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if ( $All{"FitAsyType"} eq "Asymmetry" ) {
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if ( $All{"FitAsyType"} eq "Asymmetry") {
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if ($All{"RUNSType"}) {
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my ($Full_T_Block,$Paramcomp_ref,$FullMSRFile)= MSR::CreateMSR(\%All);
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my ($Full_T_Block,$Paramcomp_ref,$FullMSRFile)= MSR::CreateMSRUni(\%All);
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# Open output file FILENAME.msr
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open( OUTF,q{>},"$FILENAME" );
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print OUTF ("$FullMSRFile");
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close(OUTF);
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} else {
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my ($Full_T_Block,$Paramcomp_ref,$FullMSRFile)= MSR::CreateMSR(\%All);
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my ($Full_T_Block,$Paramcomp_ref,$FullMSRFile)= MSR::CreateMSRUni(\%All);
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# Open output file FILENAME.msr
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open( OUTF,q{>},"$FILENAME" );
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print OUTF ("$FullMSRFile");
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close(OUTF);
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# if it is multiple runs then the produced file is a template
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my $FILENAME=$All{"FILENAME"}.".msr";
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my $Extension = "_".$All{"BeamLine"}."_".$All{"YEAR"};
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if ($All{"BeamLine"} eq "LEM (PPC)") {
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$Extension = "_LEM_".$All{"YEAR"};
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}
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} else {
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my ($Full_T_Block,$Paramcomp_ref,$FullMSRFile)= MSR::CreateMSRGLB(\%All);
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my @RUNS = split( /,/,MSR::ExpandRunNumbers($All{"RunNumbers"}));
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my @Hists = split( /,/, $All{"LRBF"} );
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# Write to template file
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open( OUTF,q{>},"$RUNS[0]_tmpl.msr" );
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print OUTF ("$FullMSRFile");
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close(OUTF);
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if (-e $FILENAME) {
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my $RUN0 = $FILENAME;
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$RUN0 =~ s/$Extension//g;
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$RUN0 =~ s/.msr//g;
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my $cmd = $All{"RunNumbers"};
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$cmd =~ s/,/ /g;
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$cmd = "msr2data \[".$cmd."\] ".$Extension." msr-".$RUN0." global";
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$cmd = $cmd."; mv $RUN0+global$Extension.msr ".$FILENAME;
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# Change runs line in the final global fit
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my $NSpectra = ($#RUNS+1)*($#Hists+1);
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my $NewRunLine = "runs ".join(" ",(1...$NSpectra));
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# Use msr2data to generate global fit MSR file
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my $RunList = join(" ",@RUNS);
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my $cmd = "msr2data \[".$RunList."\] "." _tmpl msr-".$RUNS[0]." global";
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# create the global file
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print $cmd."\n";
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my $pid = open(FTO,"$cmd 2>&1 |");
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while (<FTO>) {
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this->{ui}->fitTextOutput->append("$_");
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}
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close(FTO);
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# change the stupid name
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my $StupidName = $RUNS[0]."+global_tmpl.msr";
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# change stupid default runs line
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$cmd = "cp $StupidName $FILENAME; perl -pi -e 's/runs.*?(?=\n)/$NewRunLine/s' $FILENAME";
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$pid = open(FTO,"$cmd 2>&1 |");
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print $cmd."\n";
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while (<FTO>) {
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this->{ui}->fitTextOutput->append("$_");
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}
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}
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}
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elsif ( $All{"FitAsyType"} eq "SingleHist" ) {
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my ($Full_T_Block,$Paramcomp_ref,$FullMSRFile)= MSR::CreateMSRSingleHist(\%All);
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# Open output file FILENAME.msr
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open( OUTF,q{>},"$FILENAME" );
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print OUTF ("$FullMSRFile");
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close(OUTF);
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close(FTO);
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# feed in values of parameters if they exist
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}
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UpdateMSRFileInitTable();
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}
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@ -614,7 +617,8 @@ sub UpdateMSRFileInitTable()
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# if it is last element or there are two more = positive error, check $#Param=5/7
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# if there is only one more = minimum, check $#Param=6
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# To summarize, check the value of $#Param
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# To summarize, check the value of $#Param
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my $name=$Param[2];
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my $value=1.0*$Param[3];
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my $error = 1.0*$Param[4];
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my $minvalue=0.0;
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@ -640,6 +644,8 @@ sub UpdateMSRFileInitTable()
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$QTable->setItem($PCount,1,Qt::TableWidgetItem());
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$QTable->setItem($PCount,2,Qt::TableWidgetItem());
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$QTable->setItem($PCount,3,Qt::TableWidgetItem());
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# Set also label or row
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$QTable->verticalHeaderItem($PCount)->setText($name);
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$QTable->item($PCount,0)->setText($value);
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$QTable->item($PCount,1)->setText($error);
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$QTable->item($PCount,2)->setText($minvalue);
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@ -710,7 +716,7 @@ sub ActivateShComp()
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my $Parameters=$Paramcomp[$Component-1];
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my @Params = split( /\s+/, $Parameters );
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if ( $Component == 1 && $All{"FitAsyType"} eq "Asymmetry" ) {
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if ( $Component == 1 && ($All{"FitAsyType"} eq "Asymmetry" || $All{"FitAsyType"} eq "AsymmetryGLB")) {
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unshift( @Params, "Alpha" );
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}
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elsif ( $Component == 1 && $All{"FitAsyType"} eq "SingleHist" ) {
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@ -821,7 +827,7 @@ sub GoFit()
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# Check here is the number of histograms makes sense
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# other wise give error.
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my @Hists = split( /,/, $All{"LRBF"} );
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if ($All{"FitAsyType"} eq "Asymmetry" && $#Hists != 1) {
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if (($All{"FitAsyType"} eq "Asymmetry" || $All{"FitAsyType"} eq "AsymmetryGLB") && $#Hists != 1) {
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# we have a problem here send error message
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my $Warning = "Error: The number of histograms should be 2 for an asymmetry fit!";
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my $WarningWindow = Qt::MessageBox::information( this, "Error",$Warning);
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@ -856,7 +862,7 @@ sub GoPlot()
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# Check here is the number of histograms makes sense
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# other wise give error.
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my @Hists = split( /,/, $All{"LRBF"} );
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if ($All{"FitAsyType"} eq "Asymmetry" && $#Hists != 1) {
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if (($All{"FitAsyType"} eq "Asymmetry" || $All{"FitAsyType"} eq "AsymmetryGLB") && $#Hists != 1) {
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# we have a problem here send error message
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my $Warning = "Error: The number of histograms should be 2 for an asymmetry fit!";
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my $WarningWindow = Qt::MessageBox::information( this, "Error",$Warning);
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@ -1019,7 +1025,7 @@ sub InitializeFunctions()
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my @Params = split( /\s+/, $Parameters );
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# Alpha, No and NBg are counted in the parameters
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if ( $Component == 1 && $All{"FitAsyType"} eq "Asymmetry" ) {
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if ( $Component == 1 && ($All{"FitAsyType"} eq "Asymmetry" || $All{"FitAsyType"} eq "AsymmetryGLB" )) {
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unshift( @Params, "Alpha" );
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}
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elsif ( $Component == 1 && $All{"FitAsyType"} eq "SingleHist" ) {
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9
src/external/MuSRFitGUI/MuSRFit4.ui
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9
src/external/MuSRFitGUI/MuSRFit4.ui
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@ -231,7 +231,7 @@
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</property>
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<item>
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<property name="text">
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<string>Asymmetry</string>
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<string>Asymmetry GLB</string>
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</property>
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</item>
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<item>
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@ -241,12 +241,7 @@
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</item>
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<item>
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<property name="text">
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<string>Asymmetry GLB</string>
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</property>
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</item>
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<item>
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<property name="text">
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<string>Single Hist GLB</string>
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<string>Asymmetry</string>
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</property>
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</item>
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</widget>
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7
src/external/MuSRFitGUI/Ui_MuSRFit4.pm
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7
src/external/MuSRFitGUI/Ui_MuSRFit4.pm
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@ -5,7 +5,7 @@
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#################################################################################
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## Form generated from reading UI file 'MuSRFit4.ui'
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##
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## Created: Mon Jan 29 14:11:03 2018
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## Created: Mon Feb 5 15:38:20 2018
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## by: Qt User Interface Compiler version 4.8.7
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##
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## WARNING! All changes made in this file will be lost when recompiling UI file!
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@ -3199,10 +3199,9 @@ sub retranslateUi {
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$self->{browse}->setWhatsThis( Qt::Application::translate( 'MuSRFit4', "Browse to select data files for fitting.", undef, Qt::Application::UnicodeUTF8() ) );
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$self->{browse}->setText( Qt::Application::translate( 'MuSRFit4', "Browse", undef, Qt::Application::UnicodeUTF8() ) );
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$self->{fitAsyTypeLabel}->setText( Qt::Application::translate( 'MuSRFit4', "Fit type", undef, Qt::Application::UnicodeUTF8() ) );
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$self->{fitAsyType}->insertItems(0, [Qt::Application::translate( 'MuSRFit4', "Asymmetry", undef, Qt::Application::UnicodeUTF8() ),
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$self->{fitAsyType}->insertItems(0, [Qt::Application::translate( 'MuSRFit4', "Asymmetry GLB", undef, Qt::Application::UnicodeUTF8() ),
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Qt::Application::translate( 'MuSRFit4', "Single Hist", undef, Qt::Application::UnicodeUTF8() ),
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Qt::Application::translate( 'MuSRFit4', "Asymmetry GLB", undef, Qt::Application::UnicodeUTF8() ),
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Qt::Application::translate( 'MuSRFit4', "Single Hist GLB", undef, Qt::Application::UnicodeUTF8() )]);
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Qt::Application::translate( 'MuSRFit4', "Asymmetry", undef, Qt::Application::UnicodeUTF8() )]);
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$self->{histsLRBFLabel}->setText( Qt::Application::translate( 'MuSRFit4', "Histograms list", undef, Qt::Application::UnicodeUTF8() ) );
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$self->{histsLRBF}->setText( Qt::Application::translate( 'MuSRFit4', "1 5,3 7", undef, Qt::Application::UnicodeUTF8() ) );
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$self->{runsAuto}->setTitle( Qt::Application::translate( 'MuSRFit4', "RUN Numbers", undef, Qt::Application::UnicodeUTF8() ) );
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