cmake/cpack root dictionary issue fixed.

In order that package assembly works, the code needs to be relocatble
and any hints linking it to the original source need to be absent.
The changes here do exactely this. For rootcling the '-inlineInputHeader'
option is needed, otherwise the dictionary wants to load the header
file from the source destination which of course will fail when installing
the package on a machine without the source.

src/classes/CMakeLists.txt

@@ -2,35 +2,41 @@
 
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   PFourierCanvasDict 
-  -I${FFTW3_INCLUDE_DIR} ${MUSRFIT_INC}/PFourierCanvas.h 
+  -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${PREFIX_INC} PFourierCanvas.h 
   LINKDEF ${MUSRFIT_INC}/PFourierCanvasLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PFourierCanvas
 )
 root_generate_dictionary(
   PMusrCanvasDict 
-  -I${Boost_INCLUDE_DIR} -I${FFTW3_INCLUDE_DIR} ${MUSRFIT_INC}/PMusrCanvas.h 
+  -I${Boost_INCLUDE_DIR} -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${PREFIX_INC} PMusrCanvas.h 
   LINKDEF ${MUSRFIT_INC}/PMusrCanvasLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PMusrCanvas
 )
 root_generate_dictionary(
   PMusrT0Dict 
-  -I${Boost_INCLUDE_DIR} -I${FFTW3_INCLUDE_DIR} ${MUSRFIT_INC}/PMusrT0.h 
+  -I${Boost_INCLUDE_DIR} -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${PREFIX_INC} PMusrT0.h 
   LINKDEF ${MUSRFIT_INC}/PMusrT0LinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PMusrT0
 )
 root_generate_dictionary(
   PStartupHandlerDict 
-  -I${FFTW3_INCLUDE_DIR} ${MUSRFIT_INC}/PStartupHandler.h 
+  -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${PREFIX_INC} PStartupHandler.h 
   LINKDEF ${MUSRFIT_INC}/PStartupHandlerLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PStartupHandler
 )
 root_generate_dictionary(
   PUserFcnBaseDict 
-  -I${FFTW3_INCLUDE_DIR} ${MUSRFIT_INC}/PUserFcnBase.h 
+  -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${PREFIX_INC} PUserFcnBase.h 
   LINKDEF ${MUSRFIT_INC}/PUserFcnBaseLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PUserFcnBase
 )
 
@@ -160,15 +166,31 @@ install(
 )
 
 #--- install headers ----------------------------------------------------------
-#--- only install headers needed for classes with dictionary
 install(
-  FILES ${MUSRFIT_INC}/PFourierCanvas.h
+  FILES ${MUSRFIT_INC}/PFitterFcn.h
+        ${MUSRFIT_INC}/PFitter.h
+        ${MUSRFIT_INC}/PFourierCanvas.h
         ${MUSRFIT_INC}/PFourier.h 
+        ${MUSRFIT_INC}/PFunctionGrammar.h
+        ${MUSRFIT_INC}/PFunction.h
+        ${MUSRFIT_INC}/PFunctionHandler.h
+        ${MUSRFIT_INC}/PMsr2Data.h
+        ${MUSRFIT_INC}/PMsrHandler.h
         ${MUSRFIT_INC}/PMusrCanvas.h
         ${MUSRFIT_INC}/PMusr.h
         ${MUSRFIT_INC}/PMusrT0.h
+        ${MUSRFIT_INC}/PPrepFourier.h
+        ${MUSRFIT_INC}/PRunAsymmetry.h
+        ${MUSRFIT_INC}/PRunAsymmetryRRF.h
+        ${MUSRFIT_INC}/PRunBase.h
+        ${MUSRFIT_INC}/PRunDataHandler.h
         ${MUSRFIT_INC}/PRunListCollection.h
+        ${MUSRFIT_INC}/PRunMuMinus.h
+        ${MUSRFIT_INC}/PRunNonMusr.h
+        ${MUSRFIT_INC}/PRunSingleHisto.h
+        ${MUSRFIT_INC}/PRunSingleHistoRRF.h
         ${MUSRFIT_INC}/PStartupHandler.h
+        ${MUSRFIT_INC}/PTheory.h
         ${MUSRFIT_INC}/PUserFcnBase.h
   DESTINATION include
 )

src/external/BMWtools/CMakeLists.txt

@@ -3,12 +3,13 @@
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
 set(CUBA_INC ${CMAKE_SOURCE_DIR}/src/external/libCuba/src)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   BMWStartupHandlerDict 
-  -I${MUSRFIT_INC}
-  BMWStartupHandler.h 
+  -I${MUSRFIT_INC} -I${PREFIX_INC} BMWStartupHandler.h 
   LINKDEF BMWStartupHandlerLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE BMWStartupHandler
 )
 

src/external/MagProximity/CMakeLists.txt

@@ -2,20 +2,25 @@
 
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   PMagProximityFitterDict 
   -I${FFTW3_INCLUDE_DIR}
   -I${MUSRFIT_INC}
+  -I${PREFIX_INC}
   PMagProximityFitter.h 
   LINKDEF PMagProximityFitterLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PMagProximityFitter
 )
 root_generate_dictionary(
   PMPStartupHandlerDict 
   -I${MUSRFIT_INC}
+  -I${PREFIX_INC}
   PMPStartupHandler.h 
   LINKDEF PMPStartupHandlerLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PMPStartupHandler
 )
 

src/external/MusrRoot/CMakeLists.txt

@@ -1,8 +1,14 @@
 # - TMusrRunHeader library ----------------------------------------------------
 
 #--- generate necessary dictionaries ------------------------------------------
+set(MUSRROOT_INC ${CMAKE_SOURCE_DIR}/src/external/MusrRoot)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
+
 root_generate_dictionary(
-  TMusrRunHeaderDict TMusrRunHeader.h LINKDEF TMusrRunHeaderLinkDef.h
+  TMusrRunHeaderDict 
+  -I${MUSRROOT_INC} -I${PREFIX_INC} TMusrRunHeader.h 
+  LINKDEF TMusrRunHeaderLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TMusrRunHeader
 )
 

src/external/Nonlocal/CMakeLists.txt

@@ -2,17 +2,21 @@
 
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
+set(NONLOCAL_INC ${CMAKE_SOURCE_DIR}/src/external/Nonlocal)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   PNL_PippardFitterDict 
-  -I${FFTW3_INCLUDE_DIR} 
-  -I${MUSRFIT_INC}
-  PNL_PippardFitter.h 
+  -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${NONLOCAL_INC} -I${PREFIX_INC} PNL_PippardFitter.h 
   LINKDEF PNL_PippardFitterLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PNL_PippardFitter
 )
 root_generate_dictionary(
-  PNL_StartupHandlerDict PNL_StartupHandler.h LINKDEF PNL_StartupHandlerLinkDef.h
+  PNL_StartupHandlerDict 
+  -I${NONLOCAL_INC} -I${PREFIX_INC} PNL_StartupHandler.h 
+  LINKDEF PNL_StartupHandlerLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PNL_StartupHandler
 )
 
@@ -38,7 +42,7 @@ target_include_directories(
   PNL_PippardFitter BEFORE PRIVATE 
     $<BUILD_INTERFACE:${FFTW3_INCLUDE_DIR}> 
     $<BUILD_INTERFACE:${MUSRFIT_INC}>
-    $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}>
+    $<BUILD_INTERFACE:${CMAKE_SOURCE_DIR}>
 )
 
 #--- set target properties, e.g. version --------------------------------------
@@ -65,6 +69,7 @@ install(
 #--- install PNL_PippardFitter header -----------------------------------------
 install(
   FILES
+    PNonlocal.h 
     PNL_PippardFitter.h 
     PNL_RgeHandler.h
     PNL_StartupHandler.h

src/external/TLemRunHeader/CMakeLists.txt

@@ -1,12 +1,21 @@
 # -TLemRunHeader library ------------------------------------------------------
 
 #--- generate necessary dictionaries ------------------------------------------
+set(TLEMRUNHEADER_INC ${CMAKE_SOURCE_DIR}/src/external/TLemRunHeader)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
+
 root_generate_dictionary(
-  TLemRunHeaderDict TLemRunHeader.h LINKDEF TLemRunHeaderLinkDef.h
+  TLemRunHeaderDict 
+  -I${TLEMRUNHEADER_INC} -I${PREFIX_INC} TLemRunHeader.h 
+  LINKDEF TLemRunHeaderLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TLemRunHeader
 )
 root_generate_dictionary(
-  TLemStatsDict TLemStats.h LINKDEF TLemStatsLinkDef.h
+  TLemStatsDict 
+  -I${TLEMRUNHEADER_INC} -I${PREFIX_INC} TLemStats.h 
+  LINKDEF TLemStatsLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TLemStats 
 )
 

src/external/libBNMR/CMakeLists.txt

@@ -5,13 +5,13 @@ add_subdirectory(libLineProfile)
 
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   TBNMRDict 
-  -I${FFTW3_INCLUDE_DIR} 
-  -I${MUSRFIT_INC}
-  TBNMR.h 
+  -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${PREFIX_INC} TBNMR.h 
   LINKDEF TBNMRLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TBNMR
 )
 

src/external/libCalcMeanFieldsLEM/CMakeLists.txt

@@ -4,15 +4,13 @@
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
 set(BMW_TOOLS_INC ${CMAKE_SOURCE_DIR}/src/external/BMWtools)
 set(POFB_INC ${CMAKE_SOURCE_DIR}/src/external/libFitPofB/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   TCalcMeanFieldsLEMDict 
-  -I${FFTW3_INCLUDE_DIR} 
-  -I${MUSRFIT_INC}
-  -I${BMW_TOOLS_INC}
-  -I${POFB_INC}
-  TCalcMeanFieldsLEM.h
+  -I${FFTW3_INCLUDE_DIR} -I${MUSRFIT_INC} -I${BMW_TOOLS_INC} -I${POFB_INC} -I${PREFIX_INC} TCalcMeanFieldsLEM.h
   LINKDEF TCalcMeanFieldsLEMLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TCalcMeanFieldsLEM
 )
 

src/external/libFitPofB/classes/CMakeLists.txt

@@ -4,6 +4,7 @@
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
 set(BMW_TOOLS_INC ${CMAKE_SOURCE_DIR}/src/external/BMWtools)
 set(POFB_INC ${CMAKE_SOURCE_DIR}/src/external/libFitPofB/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   TLondon1DDict 
@@ -12,8 +13,10 @@ root_generate_dictionary(
   -I${BMW_TOOLS_INC}
   -I${POFB_INC}
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   TLondon1D.h 
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/TLondon1DLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TLondon1D
 )
 root_generate_dictionary(
@@ -23,8 +26,10 @@ root_generate_dictionary(
   -I${BMW_TOOLS_INC}
   -I${POFB_INC}
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   TVortex.h 
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/TVortexLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TVortex
 )
 root_generate_dictionary(
@@ -34,8 +39,10 @@ root_generate_dictionary(
   -I${BMW_TOOLS_INC}
   -I${POFB_INC}
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   TSkewedGss.h 
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/TSkewedGssLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TSkewedGss
 )
 

src/external/libGapIntegrals/CMakeLists.txt

@@ -3,14 +3,17 @@
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
 set(BMW_TOOLS_INC ${CMAKE_SOURCE_DIR}/src/external/BMWtools)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   TGapIntegralsDict 
   -I${FFTW3_INCLUDE_DIR} 
   -I${MUSRFIT_INC}
   -I${BMW_TOOLS_INC}
+  -I${PREFIX_INC}
   TGapIntegrals.h
   LINKDEF TGapIntegralsLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TGapIntegrals
 )
 

src/external/libLFRelaxation/CMakeLists.txt

@@ -3,14 +3,17 @@
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
 set(BMW_TOOLS_INC ${CMAKE_SOURCE_DIR}/src/external/BMWtools)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   TLFRelaxationDict 
   -I${FFTW3_INCLUDE_DIR} 
   -I${MUSRFIT_INC}
   -I${BMW_TOOLS_INC}
+  -I${PREFIX_INC}
   TLFRelaxation.h
   LINKDEF TLFRelaxationLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE TLFRelaxation
 )
 

src/external/libPhotoMeissner/classes/CMakeLists.txt

@@ -2,6 +2,7 @@
 
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   PPhotoMeissnerDict
@@ -10,16 +11,20 @@ root_generate_dictionary(
   -I${ROOT_INCLUDE_DIRS}
   -I${MUSRFIT_INC}
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   PPhotoMeissner.h 
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/PPhotoMeissnerLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PPhotoMeissner
 )
 root_generate_dictionary(
   PStartupHandler_PMDict 
   -I${MUSRFIT_INC}
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   PStartupHandler_PM.h 
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/PStartupHandler_PMLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PStartupHandler_PM
 )
 

src/external/libSpinValve/classes/CMakeLists.txt

@@ -2,21 +2,26 @@
 
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   PSkewedLorentzianDict 
   -I${FFTW3_INCLUDE_DIR} 
   -I${MUSRFIT_INC}
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   PSkewedLorentzian.h 
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/PSkewedLorentzianLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PSkewedLorentzian
 )
 root_generate_dictionary(
   PStartupHandler_SVDict 
   -I${CMAKE_CURRENT_SOURCE_DIR}/../include 
+  -I${PREFIX_INC}
   PStartupHandler_SV.h
   LINKDEF ${CMAKE_CURRENT_SOURCE_DIR}/../include/PStartupHandler_SVLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE PStartupHandler_SV
 )
 

src/external/libZFRelaxation/CMakeLists.txt

@@ -3,14 +3,17 @@
 #--- generate necessary dictionaries ------------------------------------------
 set(MUSRFIT_INC ${CMAKE_SOURCE_DIR}/src/include)
 set(BMW_TOOLS_INC ${CMAKE_SOURCE_DIR}/src/external/BMWtools)
+set(PREFIX_INC ${CMAKE_INSTALL_PREFIX}/include)
 
 root_generate_dictionary(
   ZFRelaxationDict 
   -I${FFTW3_INCLUDE_DIR} 
   -I${MUSRFIT_INC}
   -I${BMW_TOOLS_INC}
+  -I${PREFIX_INC}
   ZFRelaxation.h
   LINKDEF ZFRelaxationLinkDef.h
+  OPTIONS -inlineInputHeader
   MODULE ZFRelaxation
 )